RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 NWD2Q9ULI1 1742 aa27.27■■□□□ 1.96
TOP3A-213ENST00000582230 KIF24Q5T7B8 1368 aa27.26■■□□□ 1.95
TOP3A-213ENST00000582230 AXIN2Q9Y2T1 843 aa27.26■■□□□ 1.95
TOP3A-213ENST00000582230 PLCH1Q4KWH8 1693 aa27.26■■□□□ 1.95
TOP3A-213ENST00000582230 LMO7Q8WWI1 1683 aa27.26■■□□□ 1.95
TOP3A-213ENST00000582230 CAMTA1Q9Y6Y1 1673 aa27.26■■□□□ 1.95
TOP3A-213ENST00000582230 RTL1A6NKG5 1358 aa27.24■■□□□ 1.95
TOP3A-213ENST00000582230 VPS72Q15906 364 aa27.24■■□□□ 1.95
TOP3A-213ENST00000582230 POLKQ9UBT6 870 aa27.24■■□□□ 1.95
TOP3A-213ENST00000582230 HOXC9P31274 260 aa27.23■■□□□ 1.95
TOP3A-213ENST00000582230 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
TOP3A-213ENST00000582230 BLMP54132 1417 aaPredicted RBP27.23■■□□□ 1.95
TOP3A-213ENST00000582230 COL18A1P39060 1754 aa27.22■■□□□ 1.95
TOP3A-213ENST00000582230 CNGB1Q14028 1251 aaPredicted RBP27.22■■□□□ 1.95
TOP3A-213ENST00000582230 EMILIN1Q9Y6C2 1016 aa27.22■■□□□ 1.95
TOP3A-213ENST00000582230 ATRNO75882 1429 aa27.22■■□□□ 1.95
TOP3A-213ENST00000582230 COL5A2P05997 1499 aaPredicted RBP27.21■■□□□ 1.95
TOP3A-213ENST00000582230 POTEAQ6S8J7 498 aa27.21■■□□□ 1.95
TOP3A-213ENST00000582230 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.21■■□□□ 1.95
TOP3A-213ENST00000582230 FLT4P35916 1363 aa27.21■■□□□ 1.95
TOP3A-213ENST00000582230 LTN1O94822 1766 aa27.2■■□□□ 1.95
TOP3A-213ENST00000582230 PPM1GO15355 546 aaPredicted RBP27.19■■□□□ 1.94
TOP3A-213ENST00000582230 CCDC9Q9Y3X0 531 aaKnown RBP27.19■■□□□ 1.94
TOP3A-213ENST00000582230 NRAPQ86VF7 1730 aa27.19■■□□□ 1.94
TOP3A-213ENST00000582230 GJD4Q96KN9 370 aaPredicted RBP27.18■■□□□ 1.94
TOP3A-213ENST00000582230 WDR17Q8IZU2 1322 aa27.17■■□□□ 1.94
TOP3A-213ENST00000582230 CSB-PGBD3P0DP91 1061 aa27.17■■□□□ 1.94
TOP3A-213ENST00000582230 RXRBP28702 533 aa27.17■■□□□ 1.94
TOP3A-213ENST00000582230 RBM6P78332 1123 aaKnown RBP27.17■■□□□ 1.94
TOP3A-213ENST00000582230 LARP1Q6PKG0 1096 aaKnown RBP27.17■■□□□ 1.94
TOP3A-213ENST00000582230 ANKRD24Q8TF21 1146 aa27.17■■□□□ 1.94
TOP3A-213ENST00000582230 INSRP06213 1382 aa27.17■■□□□ 1.94
TOP3A-213ENST00000582230 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
TOP3A-213ENST00000582230 ERBB3P21860 1342 aa27.16■■□□□ 1.94
TOP3A-213ENST00000582230 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
TOP3A-213ENST00000582230 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
TOP3A-213ENST00000582230 HSP90AB2PQ58FF8 381 aa27.15■■□□□ 1.94
TOP3A-213ENST00000582230 TOM1L2Q6ZVM7 507 aa27.14■■□□□ 1.94
TOP3A-213ENST00000582230 RALBP1Q15311 655 aa27.13■■□□□ 1.93
TOP3A-213ENST00000582230 CRB1P82279 1406 aa27.13■■□□□ 1.93
TOP3A-213ENST00000582230 SPATA31A1Q5TZJ5 1347 aa27.13■■□□□ 1.93
TOP3A-213ENST00000582230 PARD3Q8TEW0 1356 aa27.12■■□□□ 1.93
TOP3A-213ENST00000582230 MTHFSP49914 203 aa27.12■■□□□ 1.93
TOP3A-213ENST00000582230 PEAK1Q9H792 1746 aa27.11■■□□□ 1.93
TOP3A-213ENST00000582230 LTV1Q96GA3 475 aaPredicted RBP27.11■■□□□ 1.93
TOP3A-213ENST00000582230 CARD10Q9BWT7 1032 aa27.11■■□□□ 1.93
TOP3A-213ENST00000582230 THRAP3Q9Y2W1 955 aaKnown RBP27.1■■□□□ 1.93
TOP3A-213ENST00000582230 MAP2P11137 1827 aaKnown RBP27.1■■□□□ 1.93
TOP3A-213ENST00000582230 CDK12Q9NYV4 1490 aaPredicted RBP27.09■■□□□ 1.93
TOP3A-213ENST00000582230 PPP2R1AP30153 589 aa27.09■■□□□ 1.93
TOP3A-213ENST00000582230 NLRP2Q9NX02 1062 aa27.09■■□□□ 1.93
TOP3A-213ENST00000582230 TCP11L2Q8N4U5 519 aa27.08■■□□□ 1.93
TOP3A-213ENST00000582230 USP35Q9P2H5 1018 aa27.08■■□□□ 1.93
TOP3A-213ENST00000582230 RGPD5Q99666 1765 aa27.07■■□□□ 1.92
TOP3A-213ENST00000582230 ONECUT3O60422 494 aaPredicted RBP27.06■■□□□ 1.92
TOP3A-213ENST00000582230 BARGINQ6ZT62 677 aa27.06■■□□□ 1.92
TOP3A-213ENST00000582230 GLI3P10071 1580 aa27.05■■□□□ 1.92
TOP3A-213ENST00000582230 EIF4A2Q14240 407 aaKnown RBP27.03■■□□□ 1.92
TOP3A-213ENST00000582230 FAM98CQ17RN3 349 aaKnown RBP27.03■■□□□ 1.92
TOP3A-213ENST00000582230 PRKRIP1Q9H875 184 aaPredicted RBP27.03■■□□□ 1.92
TOP3A-213ENST00000582230 CFAP53Q96M91 514 aa27.02■■□□□ 1.92
TOP3A-213ENST00000582230 NBPF6Q5VWK0 638 aa27.01■■□□□ 1.91
TOP3A-213ENST00000582230 NBPF4Q96M43 638 aa27.01■■□□□ 1.91
TOP3A-213ENST00000582230 CDCA7Q9BWT1 371 aaPredicted RBP27.01■■□□□ 1.91
TOP3A-213ENST00000582230 FAM208AQ9UK61 1670 aaKnown RBP27.01■■□□□ 1.91
TOP3A-213ENST00000582230 MYBBP1AQ9BQG0 1328 aaKnown RBP26.99■■□□□ 1.91
TOP3A-213ENST00000582230 DIAPH1O60610 1272 aaKnown RBP26.98■■□□□ 1.91
TOP3A-213ENST00000582230 SEPT12Q8IYM1 358 aa26.98■■□□□ 1.91
TOP3A-213ENST00000582230 A0A0G2JS52 829 aa26.97■■□□□ 1.91
TOP3A-213ENST00000582230 ANP32CO43423 234 aa26.97■■□□□ 1.91
TOP3A-213ENST00000582230 IL13P35225 146 aa26.97■■□□□ 1.91
TOP3A-213ENST00000582230 MYT1Q01538 1121 aa26.97■■□□□ 1.91
TOP3A-213ENST00000582230 EYA1Q99502 592 aa26.97■■□□□ 1.91
TOP3A-213ENST00000582230 RGS12O14924 1447 aa26.96■■□□□ 1.91
TOP3A-213ENST00000582230 IL2RBP14784 551 aa26.94■■□□□ 1.9
TOP3A-213ENST00000582230 USHBP1Q8N6Y0 703 aa26.93■■□□□ 1.9
TOP3A-213ENST00000582230 IGSF1Q8N6C5 1336 aa26.92■■□□□ 1.9
TOP3A-213ENST00000582230 DISP2A7MBM2 1401 aa26.92■■□□□ 1.9
TOP3A-213ENST00000582230 NCAPD2Q15021 1401 aa26.92■■□□□ 1.9
TOP3A-213ENST00000582230 COL3A1P02461 1466 aaPredicted RBP26.92■■□□□ 1.9
TOP3A-213ENST00000582230 NUDCQ9Y266 331 aa26.91■■□□□ 1.9
TOP3A-213ENST00000582230 THSD7AQ9UPZ6 1657 aa26.9■■□□□ 1.9
TOP3A-213ENST00000582230 RAPGEF4Q8WZA2 1011 aa26.9■■□□□ 1.9
TOP3A-213ENST00000582230 EXOC5O00471 708 aa26.88■■□□□ 1.89
TOP3A-213ENST00000582230 DDB1Q16531 1140 aa26.88■■□□□ 1.89
TOP3A-213ENST00000582230 TATP17735 454 aaPredicted RBP26.87■■□□□ 1.89
TOP3A-213ENST00000582230 KRT27Q7Z3Y8 459 aa26.87■■□□□ 1.89
TOP3A-213ENST00000582230 U2SURPO15042 1029 aaKnown RBP26.86■■□□□ 1.89
TOP3A-213ENST00000582230 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
TOP3A-213ENST00000582230 RGPD2P0DJD1 1756 aa26.86■■□□□ 1.89
TOP3A-213ENST00000582230 SULT6B1Q6IMI4 303 aa26.85■■□□□ 1.89
TOP3A-213ENST00000582230 KDRP35968 1356 aa26.84■■□□□ 1.89
TOP3A-213ENST00000582230 PLEKHG2Q9H7P9 1386 aa26.84■■□□□ 1.89
TOP3A-213ENST00000582230 PARP4Q9UKK3 1724 aaKnown RBP26.83■■□□□ 1.89
TOP3A-213ENST00000582230 OVOS2A0A0G2JMS6 1433 aa26.82■■□□□ 1.88
TOP3A-213ENST00000582230 RGPD1P0DJD0 1748 aa26.82■■□□□ 1.88
TOP3A-213ENST00000582230 MEGF6O75095 1541 aa26.82■■□□□ 1.88
TOP3A-213ENST00000582230 WNK3Q9BYP7 1800 aa26.81■■□□□ 1.88
TOP3A-213ENST00000582230 AEBP1Q8IUX7 1158 aa26.81■■□□□ 1.88
TOP3A-213ENST00000582230 ZCRB1Q8TBF4 217 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms