RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 KCNA4P22459 653 aa12.1□□□□□ -0.47
RTTN-208ENST00000581709 HOXC9P31274 260 aa12.1□□□□□ -0.47
RTTN-208ENST00000581709 TOM1L2Q6ZVM7 507 aa12.1□□□□□ -0.47
RTTN-208ENST00000581709 SLIT2O94813 1529 aa12.1□□□□□ -0.47
RTTN-208ENST00000581709 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
RTTN-208ENST00000581709 EMILIN1Q9Y6C2 1016 aa12.09□□□□□ -0.47
RTTN-208ENST00000581709 KIF24Q5T7B8 1368 aa12.08□□□□□ -0.48
RTTN-208ENST00000581709 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
RTTN-208ENST00000581709 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
RTTN-208ENST00000581709 LTV1Q96GA3 475 aaPredicted RBP12.08□□□□□ -0.48
RTTN-208ENST00000581709 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
RTTN-208ENST00000581709 USP35Q9P2H5 1018 aa12.08□□□□□ -0.48
RTTN-208ENST00000581709 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
RTTN-208ENST00000581709 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
RTTN-208ENST00000581709 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
RTTN-208ENST00000581709 WDR17Q8IZU2 1322 aa12.07□□□□□ -0.48
RTTN-208ENST00000581709 NFAT5O94916 1531 aa12.06□□□□□ -0.48
RTTN-208ENST00000581709 MTHFSP49914 203 aa12.06□□□□□ -0.48
RTTN-208ENST00000581709 RALBP1Q15311 655 aa12.06□□□□□ -0.48
RTTN-208ENST00000581709 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
RTTN-208ENST00000581709 CARD10Q9BWT7 1032 aa12.06□□□□□ -0.48
RTTN-208ENST00000581709 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
RTTN-208ENST00000581709 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
RTTN-208ENST00000581709 FLT4P35916 1363 aa12.05□□□□□ -0.48
RTTN-208ENST00000581709 ATRNO75882 1429 aa12.05□□□□□ -0.48
RTTN-208ENST00000581709 BLMP54132 1417 aaPredicted RBP12.05□□□□□ -0.48
RTTN-208ENST00000581709 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
RTTN-208ENST00000581709 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
RTTN-208ENST00000581709 ERBB3P21860 1342 aa12.05□□□□□ -0.48
RTTN-208ENST00000581709 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
RTTN-208ENST00000581709 INSRP06213 1382 aa12.05□□□□□ -0.48
RTTN-208ENST00000581709 A0A0G2JS52 829 aa12.04□□□□□ -0.48
RTTN-208ENST00000581709 MYT1Q01538 1121 aa12.04□□□□□ -0.48
RTTN-208ENST00000581709 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
RTTN-208ENST00000581709 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
RTTN-208ENST00000581709 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
RTTN-208ENST00000581709 PPP2R1AP30153 589 aa12.03□□□□□ -0.48
RTTN-208ENST00000581709 CFAP53Q96M91 514 aa12.03□□□□□ -0.48
RTTN-208ENST00000581709 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
RTTN-208ENST00000581709 CRB1P82279 1406 aa12.03□□□□□ -0.48
RTTN-208ENST00000581709 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
RTTN-208ENST00000581709 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
RTTN-208ENST00000581709 SEPT12Q8IYM1 358 aa12.02□□□□□ -0.49
RTTN-208ENST00000581709 USP54Q70EL1 1684 aa12.01□□□□□ -0.49
RTTN-208ENST00000581709 ABCA3Q99758 1704 aa12.01□□□□□ -0.49
RTTN-208ENST00000581709 CRYBG1Q9Y4K1 1723 aa12.01□□□□□ -0.49
RTTN-208ENST00000581709 DIAPH1O60610 1272 aaKnown RBP12.01□□□□□ -0.49
RTTN-208ENST00000581709 EIF4A2Q14240 407 aaKnown RBP12.01□□□□□ -0.49
RTTN-208ENST00000581709 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
RTTN-208ENST00000581709 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
RTTN-208ENST00000581709 ABCC6O95255 1503 aa12.01□□□□□ -0.49
RTTN-208ENST00000581709 ANP32CO43423 234 aa12□□□□□ -0.49
RTTN-208ENST00000581709 PIAS4Q8N2W9 510 aaPredicted RBP12□□□□□ -0.49
RTTN-208ENST00000581709 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
RTTN-208ENST00000581709 EXOC5O00471 708 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 IL2RBP14784 551 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 EYA1Q99502 592 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 NUDCQ9Y266 331 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 PARD3Q8TEW0 1356 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 MARF1Q9Y4F3 1742 aaKnown RBP11.99□□□□□ -0.49
RTTN-208ENST00000581709 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
RTTN-208ENST00000581709 NWD2Q9ULI1 1742 aa11.98□□□□□ -0.49
RTTN-208ENST00000581709 IL13P35225 146 aa11.98□□□□□ -0.49
RTTN-208ENST00000581709 DDB1Q16531 1140 aa11.98□□□□□ -0.49
RTTN-208ENST00000581709 ILDR2Q71H61 639 aa11.98□□□□□ -0.49
RTTN-208ENST00000581709 LMO7Q8WWI1 1683 aa11.97□□□□□ -0.49
RTTN-208ENST00000581709 MYBBP1AQ9BQG0 1328 aaKnown RBP11.97□□□□□ -0.49
RTTN-208ENST00000581709 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
RTTN-208ENST00000581709 KRT27Q7Z3Y8 459 aa11.97□□□□□ -0.49
RTTN-208ENST00000581709 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
RTTN-208ENST00000581709 CDK12Q9NYV4 1490 aaPredicted RBP11.96□□□□□ -0.49
RTTN-208ENST00000581709 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
RTTN-208ENST00000581709 COL18A1P39060 1754 aa11.96□□□□□ -0.49
RTTN-208ENST00000581709 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.5
RTTN-208ENST00000581709 SULT6B1Q6IMI4 303 aa11.95□□□□□ -0.5
RTTN-208ENST00000581709 ZCRB1Q8TBF4 217 aaKnown RBP11.95□□□□□ -0.5
RTTN-208ENST00000581709 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
RTTN-208ENST00000581709 IGSF1Q8N6C5 1336 aa11.93□□□□□ -0.5
RTTN-208ENST00000581709 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
RTTN-208ENST00000581709 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
RTTN-208ENST00000581709 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
RTTN-208ENST00000581709 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
RTTN-208ENST00000581709 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
RTTN-208ENST00000581709 RGS12O14924 1447 aa11.93□□□□□ -0.5
RTTN-208ENST00000581709 HMOX1P09601 288 aa11.92□□□□□ -0.5
RTTN-208ENST00000581709 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
RTTN-208ENST00000581709 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
RTTN-208ENST00000581709 PNNQ9H307 717 aaKnown RBP11.92□□□□□ -0.5
RTTN-208ENST00000581709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
RTTN-208ENST00000581709 LTN1O94822 1766 aa11.92□□□□□ -0.5
RTTN-208ENST00000581709 GLI3P10071 1580 aa11.92□□□□□ -0.5
RTTN-208ENST00000581709 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
RTTN-208ENST00000581709 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
RTTN-208ENST00000581709 FCHSD2O94868 740 aa11.91□□□□□ -0.5
RTTN-208ENST00000581709 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
RTTN-208ENST00000581709 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
RTTN-208ENST00000581709 NEFMP07197 916 aa11.9□□□□□ -0.5
RTTN-208ENST00000581709 FAM182BQ5T319 152 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms