RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 DISP2A7MBM2 1401 aa17.65■□□□□ 0.42
SENP3-204ENST00000580997 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
SENP3-204ENST00000580997 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
SENP3-204ENST00000580997 COL18A1P39060 1754 aa17.65■□□□□ 0.42
SENP3-204ENST00000580997 USP31Q70CQ4 1352 aa17.65■□□□□ 0.42
SENP3-204ENST00000580997 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
SENP3-204ENST00000580997 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
SENP3-204ENST00000580997 ZBTB7CA1YPR0 619 aa17.63■□□□□ 0.41
SENP3-204ENST00000580997 EN1Q05925 392 aaPredicted RBP17.63■□□□□ 0.41
SENP3-204ENST00000580997 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
SENP3-204ENST00000580997 WDR17Q8IZU2 1322 aa17.63■□□□□ 0.41
SENP3-204ENST00000580997 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
SENP3-204ENST00000580997 TRIM37O94972 964 aa17.62■□□□□ 0.41
SENP3-204ENST00000580997 HDGFL2Q7Z4V5 671 aaPredicted RBP17.62■□□□□ 0.41
SENP3-204ENST00000580997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
SENP3-204ENST00000580997 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
SENP3-204ENST00000580997 NFAT5O94916 1531 aa17.62■□□□□ 0.41
SENP3-204ENST00000580997 C11orf95C9JLR9 678 aaPredicted RBP17.61■□□□□ 0.41
SENP3-204ENST00000580997 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
SENP3-204ENST00000580997 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
SENP3-204ENST00000580997 NME9Q86XW9 330 aa17.6■□□□□ 0.41
SENP3-204ENST00000580997 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
SENP3-204ENST00000580997 TNS1Q9HBL0 1735 aaKnown RBP17.6■□□□□ 0.41
SENP3-204ENST00000580997 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
SENP3-204ENST00000580997 A0A1W2PP64 1363 aa17.59■□□□□ 0.41
SENP3-204ENST00000580997 NINLQ9Y2I6 1382 aa17.59■□□□□ 0.41
SENP3-204ENST00000580997 SOX12O15370 315 aa17.59■□□□□ 0.41
SENP3-204ENST00000580997 CDCA7Q9BWT1 371 aaPredicted RBP17.59■□□□□ 0.41
SENP3-204ENST00000580997 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
SENP3-204ENST00000580997 USP54Q70EL1 1684 aa17.58■□□□□ 0.41
SENP3-204ENST00000580997 ABCC6O95255 1503 aa17.58■□□□□ 0.41
SENP3-204ENST00000580997 APBA3O96018 575 aa17.58■□□□□ 0.4
SENP3-204ENST00000580997 EZH2Q15910 746 aaKnown RBP17.58■□□□□ 0.4
SENP3-204ENST00000580997 TIMELESSQ9UNS1 1208 aa17.58■□□□□ 0.4
SENP3-204ENST00000580997 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
SENP3-204ENST00000580997 DDB1Q16531 1140 aa17.56■□□□□ 0.4
SENP3-204ENST00000580997 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
SENP3-204ENST00000580997 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
SENP3-204ENST00000580997 OVOS2A0A0J9YW53 1432 aa17.54■□□□□ 0.4
SENP3-204ENST00000580997 OVOS2Q6IE36 1432 aa17.54■□□□□ 0.4
SENP3-204ENST00000580997 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
SENP3-204ENST00000580997 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
SENP3-204ENST00000580997 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
SENP3-204ENST00000580997 BCL9O00512 1426 aa17.53■□□□□ 0.4
SENP3-204ENST00000580997 USP47Q96K76 1375 aa17.53■□□□□ 0.4
SENP3-204ENST00000580997 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
SENP3-204ENST00000580997 ERBB3P21860 1342 aa17.52■□□□□ 0.4
SENP3-204ENST00000580997 LRRC37A3O60309 1634 aa17.52■□□□□ 0.4
SENP3-204ENST00000580997 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.4
SENP3-204ENST00000580997 RGPD5Q99666 1765 aa17.52■□□□□ 0.4
SENP3-204ENST00000580997 TMF1P82094 1093 aa17.51■□□□□ 0.39
SENP3-204ENST00000580997 EXOC5O00471 708 aa17.5■□□□□ 0.39
SENP3-204ENST00000580997 R3HDM1Q15032 1099 aaKnown RBP17.5■□□□□ 0.39
SENP3-204ENST00000580997 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
SENP3-204ENST00000580997 PLSCR1O15162 318 aa17.49■□□□□ 0.39
SENP3-204ENST00000580997 BCL11BQ9C0K0 894 aaPredicted RBP17.49■□□□□ 0.39
SENP3-204ENST00000580997 LRP5O75197 1615 aa17.48■□□□□ 0.39
SENP3-204ENST00000580997 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
SENP3-204ENST00000580997 IP6K1Q92551 441 aa17.48■□□□□ 0.39
SENP3-204ENST00000580997 WNK3Q9BYP7 1800 aa17.48■□□□□ 0.39
SENP3-204ENST00000580997 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
SENP3-204ENST00000580997 COG3Q96JB2 828 aa17.47■□□□□ 0.39
SENP3-204ENST00000580997 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
SENP3-204ENST00000580997 RREB1Q92766 1687 aa17.46■□□□□ 0.39
SENP3-204ENST00000580997 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
SENP3-204ENST00000580997 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
SENP3-204ENST00000580997 LTN1O94822 1766 aa17.45■□□□□ 0.38
SENP3-204ENST00000580997 FYB1O15117 783 aa17.45■□□□□ 0.38
SENP3-204ENST00000580997 DSG3P32926 999 aa17.45■□□□□ 0.38
SENP3-204ENST00000580997 IL2RBP14784 551 aa17.44■□□□□ 0.38
SENP3-204ENST00000580997 NBPF14Q5TI25 921 aa17.44■□□□□ 0.38
SENP3-204ENST00000580997 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
SENP3-204ENST00000580997 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
SENP3-204ENST00000580997 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
SENP3-204ENST00000580997 NUP188Q5SRE5 1749 aa17.42■□□□□ 0.38
SENP3-204ENST00000580997 FBLN1P23142 703 aa17.42■□□□□ 0.38
SENP3-204ENST00000580997 PROM2Q8N271 834 aa17.42■□□□□ 0.38
SENP3-204ENST00000580997 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
SENP3-204ENST00000580997 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
SENP3-204ENST00000580997 HOXC9P31274 260 aa17.41■□□□□ 0.38
SENP3-204ENST00000580997 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
SENP3-204ENST00000580997 GGNBP2Q9H3C7 697 aa17.39■□□□□ 0.37
SENP3-204ENST00000580997 KCNQ2O43526 872 aa17.38■□□□□ 0.37
SENP3-204ENST00000580997 AMPHP49418 695 aa17.38■□□□□ 0.37
SENP3-204ENST00000580997 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
SENP3-204ENST00000580997 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
SENP3-204ENST00000580997 RRS1Q15050 365 aaKnown RBP17.36■□□□□ 0.37
SENP3-204ENST00000580997 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
SENP3-204ENST00000580997 FAM208AQ9UK61 1670 aaKnown RBP17.35■□□□□ 0.37
SENP3-204ENST00000580997 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
SENP3-204ENST00000580997 ANO8Q9HCE9 1232 aaPredicted RBP17.34■□□□□ 0.37
SENP3-204ENST00000580997 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
SENP3-204ENST00000580997 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
SENP3-204ENST00000580997 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
SENP3-204ENST00000580997 MYOM1P52179 1685 aa17.32■□□□□ 0.36
SENP3-204ENST00000580997 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
SENP3-204ENST00000580997 INSRP06213 1382 aa17.32■□□□□ 0.36
SENP3-204ENST00000580997 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
SENP3-204ENST00000580997 HSP90AB2PQ58FF8 381 aa17.31■□□□□ 0.36
SENP3-204ENST00000580997 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms