RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 ATRNO75882 1429 aa30.99■■■□□ 2.55
NDEL1-207ENST00000580012 LMO7Q8WWI1 1683 aa30.98■■■□□ 2.55
NDEL1-207ENST00000580012 KIF24Q5T7B8 1368 aa30.98■■■□□ 2.55
NDEL1-207ENST00000580012 HOXC9P31274 260 aa30.97■■■□□ 2.55
NDEL1-207ENST00000580012 ABCC6O95255 1503 aa30.97■■■□□ 2.55
NDEL1-207ENST00000580012 COL18A1P39060 1754 aa30.97■■■□□ 2.55
NDEL1-207ENST00000580012 TNNT2P45379 298 aaPredicted RBP30.96■■■□□ 2.55
NDEL1-207ENST00000580012 AMPHP49418 695 aa30.96■■■□□ 2.55
NDEL1-207ENST00000580012 EVA1CP58658 441 aa30.95■■■□□ 2.55
NDEL1-207ENST00000580012 EMILIN1Q9Y6C2 1016 aa30.95■■■□□ 2.55
NDEL1-207ENST00000580012 RTL1A6NKG5 1358 aa30.94■■■□□ 2.54
NDEL1-207ENST00000580012 NWD2Q9ULI1 1742 aa30.94■■■□□ 2.54
NDEL1-207ENST00000580012 COL5A2P05997 1499 aaPredicted RBP30.94■■■□□ 2.54
NDEL1-207ENST00000580012 GJD4Q96KN9 370 aaPredicted RBP30.93■■■□□ 2.54
NDEL1-207ENST00000580012 STRN4Q9NRL3 753 aa30.93■■■□□ 2.54
NDEL1-207ENST00000580012 LARP1Q6PKG0 1096 aaKnown RBP30.92■■■□□ 2.54
NDEL1-207ENST00000580012 BLMP54132 1417 aaPredicted RBP30.91■■■□□ 2.54
NDEL1-207ENST00000580012 PLCH1Q4KWH8 1693 aa30.91■■■□□ 2.54
NDEL1-207ENST00000580012 RBM6P78332 1123 aaKnown RBP30.91■■■□□ 2.54
NDEL1-207ENST00000580012 SPATA31A5Q5VU36 1347 aa30.91■■■□□ 2.54
NDEL1-207ENST00000580012 SPATA31A7Q8IWB4 1347 aa30.91■■■□□ 2.54
NDEL1-207ENST00000580012 ANKRD26Q9UPS8 1709 aa30.9■■■□□ 2.54
NDEL1-207ENST00000580012 RXRBP28702 533 aa30.9■■■□□ 2.54
NDEL1-207ENST00000580012 HSP90AB2PQ58FF8 381 aa30.9■■■□□ 2.54
NDEL1-207ENST00000580012 WDR17Q8IZU2 1322 aa30.9■■■□□ 2.54
NDEL1-207ENST00000580012 ERBB3P21860 1342 aa30.89■■■□□ 2.54
NDEL1-207ENST00000580012 FLT4P35916 1363 aa30.89■■■□□ 2.54
NDEL1-207ENST00000580012 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.88■■■□□ 2.53
NDEL1-207ENST00000580012 INSRP06213 1382 aa30.88■■■□□ 2.53
NDEL1-207ENST00000580012 NRAPQ86VF7 1730 aa30.87■■■□□ 2.53
NDEL1-207ENST00000580012 ANKRD24Q8TF21 1146 aa30.87■■■□□ 2.53
NDEL1-207ENST00000580012 SPATA31A1Q5TZJ5 1347 aa30.87■■■□□ 2.53
NDEL1-207ENST00000580012 SMG6Q86US8 1419 aaKnown RBP30.87■■■□□ 2.53
NDEL1-207ENST00000580012 ONECUT3O60422 494 aaPredicted RBP30.86■■■□□ 2.53
NDEL1-207ENST00000580012 CNGB1Q14028 1251 aaPredicted RBP30.86■■■□□ 2.53
NDEL1-207ENST00000580012 PPM1GO15355 546 aaPredicted RBP30.85■■■□□ 2.53
NDEL1-207ENST00000580012 PARD3Q8TEW0 1356 aa30.83■■■□□ 2.53
NDEL1-207ENST00000580012 MTHFSP49914 203 aa30.83■■■□□ 2.53
NDEL1-207ENST00000580012 CARD10Q9BWT7 1032 aa30.83■■■□□ 2.53
NDEL1-207ENST00000580012 CCDC9Q9Y3X0 531 aaKnown RBP30.83■■■□□ 2.53
NDEL1-207ENST00000580012 CRB1P82279 1406 aa30.82■■■□□ 2.52
NDEL1-207ENST00000580012 CSB-PGBD3P0DP91 1061 aa30.82■■■□□ 2.52
NDEL1-207ENST00000580012 TOM1L2Q6ZVM7 507 aa30.82■■■□□ 2.52
NDEL1-207ENST00000580012 CDK12Q9NYV4 1490 aaPredicted RBP30.82■■■□□ 2.52
NDEL1-207ENST00000580012 LTN1O94822 1766 aa30.82■■■□□ 2.52
NDEL1-207ENST00000580012 PEAK1Q9H792 1746 aa30.81■■■□□ 2.52
NDEL1-207ENST00000580012 PPP2R1AP30153 589 aa30.8■■■□□ 2.52
NDEL1-207ENST00000580012 RALBP1Q15311 655 aa30.8■■■□□ 2.52
NDEL1-207ENST00000580012 TCP11L2Q8N4U5 519 aa30.8■■■□□ 2.52
NDEL1-207ENST00000580012 LTV1Q96GA3 475 aaPredicted RBP30.8■■■□□ 2.52
NDEL1-207ENST00000580012 THRAP3Q9Y2W1 955 aaKnown RBP30.8■■■□□ 2.52
NDEL1-207ENST00000580012 BARGINQ6ZT62 677 aa30.79■■■□□ 2.52
NDEL1-207ENST00000580012 UPF1Q92900 1129 aaKnown RBP eCLIP30.79■■■□□ 2.52
NDEL1-207ENST00000580012 GLI3P10071 1580 aa30.77■■■□□ 2.52
NDEL1-207ENST00000580012 NLRP2Q9NX02 1062 aa30.76■■■□□ 2.51
NDEL1-207ENST00000580012 EIF4A2Q14240 407 aaKnown RBP30.75■■■□□ 2.51
NDEL1-207ENST00000580012 NBPF6Q5VWK0 638 aa30.75■■■□□ 2.51
NDEL1-207ENST00000580012 NBPF4Q96M43 638 aa30.75■■■□□ 2.51
NDEL1-207ENST00000580012 USP35Q9P2H5 1018 aa30.75■■■□□ 2.51
NDEL1-207ENST00000580012 MAP2P11137 1827 aaKnown RBP30.74■■■□□ 2.51
NDEL1-207ENST00000580012 FAM98CQ17RN3 349 aaKnown RBP30.73■■■□□ 2.51
NDEL1-207ENST00000580012 RGPD5Q99666 1765 aa30.72■■■□□ 2.51
NDEL1-207ENST00000580012 PRKRIP1Q9H875 184 aaPredicted RBP30.72■■■□□ 2.51
NDEL1-207ENST00000580012 IL13P35225 146 aa30.71■■■□□ 2.51
NDEL1-207ENST00000580012 SEPT12Q8IYM1 358 aa30.7■■■□□ 2.51
NDEL1-207ENST00000580012 RGS12O14924 1447 aa30.7■■■□□ 2.5
NDEL1-207ENST00000580012 EYA1Q99502 592 aa30.69■■■□□ 2.5
NDEL1-207ENST00000580012 CDCA7Q9BWT1 371 aaPredicted RBP30.68■■■□□ 2.5
NDEL1-207ENST00000580012 DISP2A7MBM2 1401 aa30.65■■■□□ 2.5
NDEL1-207ENST00000580012 NCAPD2Q15021 1401 aa30.64■■■□□ 2.5
NDEL1-207ENST00000580012 DIAPH1O60610 1272 aaKnown RBP30.63■■■□□ 2.49
NDEL1-207ENST00000580012 IGSF1Q8N6C5 1336 aa30.63■■■□□ 2.49
NDEL1-207ENST00000580012 MYBBP1AQ9BQG0 1328 aaKnown RBP30.63■■■□□ 2.49
NDEL1-207ENST00000580012 IL2RBP14784 551 aa30.62■■■□□ 2.49
NDEL1-207ENST00000580012 CFAP53Q96M91 514 aa30.62■■■□□ 2.49
NDEL1-207ENST00000580012 COL3A1P02461 1466 aaPredicted RBP30.62■■■□□ 2.49
NDEL1-207ENST00000580012 USHBP1Q8N6Y0 703 aa30.61■■■□□ 2.49
NDEL1-207ENST00000580012 FAM208AQ9UK61 1670 aaKnown RBP30.58■■■□□ 2.49
NDEL1-207ENST00000580012 THSD7AQ9UPZ6 1657 aa30.58■■■□□ 2.49
NDEL1-207ENST00000580012 A0A0G2JS52 829 aa30.55■■■□□ 2.48
NDEL1-207ENST00000580012 ANP32CO43423 234 aa30.55■■■□□ 2.48
NDEL1-207ENST00000580012 MYT1Q01538 1121 aa30.55■■■□□ 2.48
NDEL1-207ENST00000580012 EXOC5O00471 708 aa30.54■■■□□ 2.48
NDEL1-207ENST00000580012 DDB1Q16531 1140 aa30.54■■■□□ 2.48
NDEL1-207ENST00000580012 KRT27Q7Z3Y8 459 aa30.54■■■□□ 2.48
NDEL1-207ENST00000580012 RAPGEF4Q8WZA2 1011 aa30.53■■■□□ 2.48
NDEL1-207ENST00000580012 KDRP35968 1356 aa30.53■■■□□ 2.48
NDEL1-207ENST00000580012 TATP17735 454 aaPredicted RBP30.51■■■□□ 2.47
NDEL1-207ENST00000580012 SULT6B1Q6IMI4 303 aa30.51■■■□□ 2.47
NDEL1-207ENST00000580012 AEBP1Q8IUX7 1158 aa30.51■■■□□ 2.47
NDEL1-207ENST00000580012 MEGF6O75095 1541 aa30.51■■■□□ 2.47
NDEL1-207ENST00000580012 PDE3BQ13370 1112 aa30.5■■■□□ 2.47
NDEL1-207ENST00000580012 NUDCQ9Y266 331 aa30.5■■■□□ 2.47
NDEL1-207ENST00000580012 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
NDEL1-207ENST00000580012 RGPD2P0DJD1 1756 aa30.49■■■□□ 2.47
NDEL1-207ENST00000580012 ZCRB1Q8TBF4 217 aaKnown RBP30.48■■■□□ 2.47
NDEL1-207ENST00000580012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.48■■■□□ 2.475e-15■□□□□ 10.5
NDEL1-207ENST00000580012 PLEKHG2Q9H7P9 1386 aa30.48■■■□□ 2.47
NDEL1-207ENST00000580012 MARCH10Q8NA82 808 aaPredicted RBP30.47■■■□□ 2.47
NDEL1-207ENST00000580012 U2SURPO15042 1029 aaKnown RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms