RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 COL18A1P39060 1754 aa23.35■■□□□ 1.33
CBX3P2-201ENST00000579647 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
CBX3P2-201ENST00000579647 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
CBX3P2-201ENST00000579647 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
CBX3P2-201ENST00000579647 GLI3P10071 1580 aa23.33■■□□□ 1.33
CBX3P2-201ENST00000579647 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.32
CBX3P2-201ENST00000579647 MAP3K19Q56UN5 1328 aa23.32■■□□□ 1.32
CBX3P2-201ENST00000579647 COL5A2P05997 1499 aaPredicted RBP23.32■■□□□ 1.32
CBX3P2-201ENST00000579647 AMPHP49418 695 aa23.32■■□□□ 1.32
CBX3P2-201ENST00000579647 RGS12O14924 1447 aa23.31■■□□□ 1.32
CBX3P2-201ENST00000579647 CDK12Q9NYV4 1490 aaPredicted RBP23.31■■□□□ 1.32
CBX3P2-201ENST00000579647 LTN1O94822 1766 aa23.31■■□□□ 1.32
CBX3P2-201ENST00000579647 RGPD5Q99666 1765 aa23.31■■□□□ 1.32
CBX3P2-201ENST00000579647 PER1O15534 1290 aaPredicted RBP23.31■■□□□ 1.32
CBX3P2-201ENST00000579647 SPATA31A1Q5TZJ5 1347 aa23.31■■□□□ 1.32
CBX3P2-201ENST00000579647 CSB-PGBD3P0DP91 1061 aa23.3■■□□□ 1.32
CBX3P2-201ENST00000579647 FAM98CQ17RN3 349 aaKnown RBP23.3■■□□□ 1.32
CBX3P2-201ENST00000579647 IP6K1Q92551 441 aa23.3■■□□□ 1.32
CBX3P2-201ENST00000579647 TNNT2P45379 298 aaPredicted RBP23.29■■□□□ 1.32
CBX3P2-201ENST00000579647 TOM1L2Q6ZVM7 507 aa23.29■■□□□ 1.32
CBX3P2-201ENST00000579647 A0A0G2JS52 829 aa23.28■■□□□ 1.32
CBX3P2-201ENST00000579647 MYT1Q01538 1121 aa23.28■■□□□ 1.32
CBX3P2-201ENST00000579647 ONECUT3O60422 494 aaPredicted RBP23.27■■□□□ 1.32
CBX3P2-201ENST00000579647 HOXC9P31274 260 aa23.27■■□□□ 1.32
CBX3P2-201ENST00000579647 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
CBX3P2-201ENST00000579647 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
CBX3P2-201ENST00000579647 WDR17Q8IZU2 1322 aa23.27■■□□□ 1.32
CBX3P2-201ENST00000579647 MORC1Q86VD1 984 aa23.26■■□□□ 1.31
CBX3P2-201ENST00000579647 LTV1Q96GA3 475 aaPredicted RBP23.26■■□□□ 1.31
CBX3P2-201ENST00000579647 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 ANKRD24Q8TF21 1146 aa23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 CRB1P82279 1406 aa23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 NSD2O96028 1365 aa23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 SOCS7O14512 581 aa23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 TCP11L2Q8N4U5 519 aa23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 EMILIN1Q9Y6C2 1016 aa23.25■■□□□ 1.31
CBX3P2-201ENST00000579647 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
CBX3P2-201ENST00000579647 ABCC6O95255 1503 aa23.23■■□□□ 1.31
CBX3P2-201ENST00000579647 ERBB3P21860 1342 aa23.23■■□□□ 1.31
CBX3P2-201ENST00000579647 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
CBX3P2-201ENST00000579647 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
CBX3P2-201ENST00000579647 NLRP2Q9NX02 1062 aa23.22■■□□□ 1.31
CBX3P2-201ENST00000579647 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
CBX3P2-201ENST00000579647 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
CBX3P2-201ENST00000579647 BARGINQ6ZT62 677 aa23.21■■□□□ 1.31
CBX3P2-201ENST00000579647 CARD10Q9BWT7 1032 aa23.21■■□□□ 1.31
CBX3P2-201ENST00000579647 POLKQ9UBT6 870 aa23.21■■□□□ 1.31
CBX3P2-201ENST00000579647 THRAP3Q9Y2W1 955 aaKnown RBP23.21■■□□□ 1.31
CBX3P2-201ENST00000579647 RTL1A6NKG5 1358 aa23.19■■□□□ 1.3
CBX3P2-201ENST00000579647 MAP2P11137 1827 aaKnown RBP23.18■■□□□ 1.3
CBX3P2-201ENST00000579647 PEAK1Q9H792 1746 aa23.17■■□□□ 1.3
CBX3P2-201ENST00000579647 FLT4P35916 1363 aa23.17■■□□□ 1.3
CBX3P2-201ENST00000579647 DDX10Q13206 875 aaKnown RBP23.16■■□□□ 1.3
CBX3P2-201ENST00000579647 BRWD3Q6RI45 1802 aa23.16■■□□□ 1.3
CBX3P2-201ENST00000579647 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
CBX3P2-201ENST00000579647 KRT27Q7Z3Y8 459 aa23.16■■□□□ 1.3
CBX3P2-201ENST00000579647 INSRP06213 1382 aa23.15■■□□□ 1.3
CBX3P2-201ENST00000579647 THSD7AQ9UPZ6 1657 aa23.14■■□□□ 1.29
CBX3P2-201ENST00000579647 NPC1L1Q9UHC9 1359 aa23.13■■□□□ 1.29
CBX3P2-201ENST00000579647 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
CBX3P2-201ENST00000579647 NBPF6Q5VWK0 638 aa23.12■■□□□ 1.29
CBX3P2-201ENST00000579647 NBPF4Q96M43 638 aa23.12■■□□□ 1.29
CBX3P2-201ENST00000579647 PDE3BQ13370 1112 aa23.11■■□□□ 1.29
CBX3P2-201ENST00000579647 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
CBX3P2-201ENST00000579647 USHBP1Q8N6Y0 703 aa23.09■■□□□ 1.29
CBX3P2-201ENST00000579647 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
CBX3P2-201ENST00000579647 CDCA7Q9BWT1 371 aaPredicted RBP23.09■■□□□ 1.29
CBX3P2-201ENST00000579647 RGPD2P0DJD1 1756 aa23.09■■□□□ 1.29
CBX3P2-201ENST00000579647 IL2RBP14784 551 aa23.08■■□□□ 1.29
CBX3P2-201ENST00000579647 DDB1Q16531 1140 aa23.08■■□□□ 1.29
CBX3P2-201ENST00000579647 MTHFSP49914 203 aa23.08■■□□□ 1.28
CBX3P2-201ENST00000579647 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
CBX3P2-201ENST00000579647 EIF4A2Q14240 407 aaKnown RBP23.07■■□□□ 1.28
CBX3P2-201ENST00000579647 DISP2A7MBM2 1401 aa23.06■■□□□ 1.28
CBX3P2-201ENST00000579647 EXOC5O00471 708 aa23.06■■□□□ 1.28
CBX3P2-201ENST00000579647 FAM208AQ9UK61 1670 aaKnown RBP23.05■■□□□ 1.28
CBX3P2-201ENST00000579647 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
CBX3P2-201ENST00000579647 EYA1Q99502 592 aa23.04■■□□□ 1.28
CBX3P2-201ENST00000579647 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
CBX3P2-201ENST00000579647 LRRC37A3O60309 1634 aa23.01■■□□□ 1.27
CBX3P2-201ENST00000579647 MARCH10Q8NA82 808 aaPredicted RBP23■■□□□ 1.27
CBX3P2-201ENST00000579647 FAM196AQ6ZSG2 479 aa22.99■■□□□ 1.27
CBX3P2-201ENST00000579647 RAPGEF4Q8WZA2 1011 aa22.99■■□□□ 1.27
CBX3P2-201ENST00000579647 PPP2R1AP30153 589 aa22.99■■□□□ 1.27
CBX3P2-201ENST00000579647 TATP17735 454 aaPredicted RBP22.98■■□□□ 1.27
CBX3P2-201ENST00000579647 IL13P35225 146 aa22.97■■□□□ 1.27
CBX3P2-201ENST00000579647 DDX54Q8TDD1 881 aaKnown RBP22.97■■□□□ 1.27
CBX3P2-201ENST00000579647 MEGF6O75095 1541 aa22.97■■□□□ 1.27
CBX3P2-201ENST00000579647 ZCRB1Q8TBF4 217 aaKnown RBP22.96■■□□□ 1.27
CBX3P2-201ENST00000579647 TNS2Q63HR2 1409 aa22.95■■□□□ 1.26
CBX3P2-201ENST00000579647 CCDC125Q86Z20 511 aa22.95■■□□□ 1.26
CBX3P2-201ENST00000579647 DIAPH1O60610 1272 aaKnown RBP22.94■■□□□ 1.26
CBX3P2-201ENST00000579647 TRIM37O94972 964 aa22.94■■□□□ 1.26
CBX3P2-201ENST00000579647 IGSF1Q8N6C5 1336 aa22.94■■□□□ 1.26
CBX3P2-201ENST00000579647 SF3B2Q13435 895 aaKnown RBP22.93■■□□□ 1.26
CBX3P2-201ENST00000579647 OVOS2A0A0G2JMS6 1433 aa22.93■■□□□ 1.26
CBX3P2-201ENST00000579647 PARD3Q8TEW0 1356 aa22.92■■□□□ 1.26
CBX3P2-201ENST00000579647 NCAPD2Q15021 1401 aa22.92■■□□□ 1.26
CBX3P2-201ENST00000579647 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
CBX3P2-201ENST00000579647 AEBP1Q8IUX7 1158 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms