RNA–Protein interactions for RNA: ENST00000579557.5

NUP85-212, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-212ENST00000579557 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
NUP85-212ENST00000579557 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
NUP85-212ENST00000579557 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
NUP85-212ENST00000579557 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
NUP85-212ENST00000579557 SPATA31A1Q5TZJ5 1347 aa13.17□□□□□ -0.3
NUP85-212ENST00000579557 SOX12O15370 315 aa13.17□□□□□ -0.3
NUP85-212ENST00000579557 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
NUP85-212ENST00000579557 ABCC6O95255 1503 aa13.17□□□□□ -0.3
NUP85-212ENST00000579557 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
NUP85-212ENST00000579557 LTN1O94822 1766 aa13.16□□□□□ -0.3
NUP85-212ENST00000579557 POLR3GLQ9BT43 218 aa13.15□□□□□ -0.3
NUP85-212ENST00000579557 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
NUP85-212ENST00000579557 BRWD3Q6RI45 1802 aa13.14□□□□□ -0.31
NUP85-212ENST00000579557 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
NUP85-212ENST00000579557 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
NUP85-212ENST00000579557 COG3Q96JB2 828 aa13.13□□□□□ -0.31
NUP85-212ENST00000579557 STRN4Q9NRL3 753 aa13.13□□□□□ -0.31
NUP85-212ENST00000579557 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
NUP85-212ENST00000579557 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
NUP85-212ENST00000579557 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
NUP85-212ENST00000579557 IP6K1Q92551 441 aa13.12□□□□□ -0.31
NUP85-212ENST00000579557 ERBB3P21860 1342 aa13.12□□□□□ -0.31
NUP85-212ENST00000579557 HOXC9P31274 260 aa13.11□□□□□ -0.31
NUP85-212ENST00000579557 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
NUP85-212ENST00000579557 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
NUP85-212ENST00000579557 CRB1P82279 1406 aa13.11□□□□□ -0.31
NUP85-212ENST00000579557 FAM208AQ9UK61 1670 aaKnown RBP13.11□□□□□ -0.31
NUP85-212ENST00000579557 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
NUP85-212ENST00000579557 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
NUP85-212ENST00000579557 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
NUP85-212ENST00000579557 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
NUP85-212ENST00000579557 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
NUP85-212ENST00000579557 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
NUP85-212ENST00000579557 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
NUP85-212ENST00000579557 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
NUP85-212ENST00000579557 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
NUP85-212ENST00000579557 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
NUP85-212ENST00000579557 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
NUP85-212ENST00000579557 CARD10Q9BWT7 1032 aa13.08□□□□□ -0.32
NUP85-212ENST00000579557 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
NUP85-212ENST00000579557 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
NUP85-212ENST00000579557 LRRC37A3O60309 1634 aa13.07□□□□□ -0.32
NUP85-212ENST00000579557 TCP11L2Q8N4U5 519 aa13.07□□□□□ -0.32
NUP85-212ENST00000579557 PARP4Q9UKK3 1724 aaKnown RBP13.07□□□□□ -0.32
NUP85-212ENST00000579557 NSD2O96028 1365 aa13.07□□□□□ -0.32
NUP85-212ENST00000579557 INSRP06213 1382 aa13.07□□□□□ -0.32
NUP85-212ENST00000579557 EVA1CP58658 441 aa13.06□□□□□ -0.32
NUP85-212ENST00000579557 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
NUP85-212ENST00000579557 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
NUP85-212ENST00000579557 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
NUP85-212ENST00000579557 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
NUP85-212ENST00000579557 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
NUP85-212ENST00000579557 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
NUP85-212ENST00000579557 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
NUP85-212ENST00000579557 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
NUP85-212ENST00000579557 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
NUP85-212ENST00000579557 FLT4P35916 1363 aa13.04□□□□□ -0.32
NUP85-212ENST00000579557 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
NUP85-212ENST00000579557 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
NUP85-212ENST00000579557 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
NUP85-212ENST00000579557 MEGF6O75095 1541 aa13.03□□□□□ -0.32
NUP85-212ENST00000579557 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
NUP85-212ENST00000579557 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
NUP85-212ENST00000579557 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
NUP85-212ENST00000579557 MARCH10Q8NA82 808 aaPredicted RBP13.02□□□□□ -0.33
NUP85-212ENST00000579557 LTV1Q96GA3 475 aaPredicted RBP13.02□□□□□ -0.33
NUP85-212ENST00000579557 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.33
NUP85-212ENST00000579557 AMPHP49418 695 aa13.01□□□□□ -0.33
NUP85-212ENST00000579557 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
NUP85-212ENST00000579557 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
NUP85-212ENST00000579557 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
NUP85-212ENST00000579557 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
NUP85-212ENST00000579557 MORC1Q86VD1 984 aa13□□□□□ -0.33
NUP85-212ENST00000579557 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
NUP85-212ENST00000579557 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
NUP85-212ENST00000579557 EYA1Q99502 592 aa12.99□□□□□ -0.33
NUP85-212ENST00000579557 BCL9O00512 1426 aa12.98□□□□□ -0.33
NUP85-212ENST00000579557 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
NUP85-212ENST00000579557 IL13P35225 146 aa12.98□□□□□ -0.33
NUP85-212ENST00000579557 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
NUP85-212ENST00000579557 OVOS2A0A0G2JMS6 1433 aa12.97□□□□□ -0.33
NUP85-212ENST00000579557 MTHFSP49914 203 aa12.97□□□□□ -0.33
NUP85-212ENST00000579557 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
NUP85-212ENST00000579557 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.33
NUP85-212ENST00000579557 IGSF1Q8N6C5 1336 aa12.96□□□□□ -0.33
NUP85-212ENST00000579557 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
NUP85-212ENST00000579557 DDX10Q13206 875 aaKnown RBP12.96□□□□□ -0.33
NUP85-212ENST00000579557 IL2RBP14784 551 aa12.95□□□□□ -0.34
NUP85-212ENST00000579557 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
NUP85-212ENST00000579557 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
NUP85-212ENST00000579557 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
NUP85-212ENST00000579557 DDB1Q16531 1140 aa12.94□□□□□ -0.34
NUP85-212ENST00000579557 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
NUP85-212ENST00000579557 KDRP35968 1356 aa12.94□□□□□ -0.34
NUP85-212ENST00000579557 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
NUP85-212ENST00000579557 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
NUP85-212ENST00000579557 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
NUP85-212ENST00000579557 A0A0G2JS52 829 aa12.92□□□□□ -0.34
NUP85-212ENST00000579557 CYP27B1O15528 508 aa12.92□□□□□ -0.34
NUP85-212ENST00000579557 KCNQ2O43526 872 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms