RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
ARHGAP28-209ENST00000579245 SPNS2Q8IVW8 549 aa8.83□□□□□ -1
ARHGAP28-209ENST00000579245 PLEKHM2Q8IWE5 1019 aa8.83□□□□□ -1
ARHGAP28-209ENST00000579245 USTQ9Y2C2 406 aa8.83□□□□□ -1
ARHGAP28-209ENST00000579245 GIGYF1O75420 1035 aaPredicted RBP8.82□□□□□ -1
ARHGAP28-209ENST00000579245 SLC10A4Q96EP9 437 aa8.82□□□□□ -1
ARHGAP28-209ENST00000579245 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
ARHGAP28-209ENST00000579245 PLA2G2CQ5R387 149 aa8.81□□□□□ -1
ARHGAP28-209ENST00000579245 ANKLE1Q8NAG6 615 aa8.81□□□□□ -1
ARHGAP28-209ENST00000579245 TRIM32Q13049 653 aa8.8□□□□□ -1
ARHGAP28-209ENST00000579245 EML3Q32P44 896 aa8.8□□□□□ -1
ARHGAP28-209ENST00000579245 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
ARHGAP28-209ENST00000579245 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
ARHGAP28-209ENST00000579245 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
ARHGAP28-209ENST00000579245 TRAF7Q6Q0C0 670 aa8.79□□□□□ -1
ARHGAP28-209ENST00000579245 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
ARHGAP28-209ENST00000579245 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.79□□□□□ -1
ARHGAP28-209ENST00000579245 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
ARHGAP28-209ENST00000579245 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
ARHGAP28-209ENST00000579245 RASA1P20936 1047 aa8.78□□□□□ -1
ARHGAP28-209ENST00000579245 CRTC2Q53ET0 693 aaPredicted RBP8.78□□□□□ -1
ARHGAP28-209ENST00000579245 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
ARHGAP28-209ENST00000579245 RNF20Q5VTR2 975 aa8.78□□□□□ -1
ARHGAP28-209ENST00000579245 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
ARHGAP28-209ENST00000579245 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
ARHGAP28-209ENST00000579245 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
ARHGAP28-209ENST00000579245 NOVA2Q9UNW9 492 aaKnown RBP8.78□□□□□ -1
ARHGAP28-209ENST00000579245 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L15C9J2P7 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L10C9JJH3 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L13C9JLJ4 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L12C9JPN9 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L11C9JVI0 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L21D6R901 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L18D6R9N7 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L22D6RA61 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L17D6RBQ6 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L19D6RCP7 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L20D6RJB6 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 RAB15P59190 212 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 USP17L24Q0WX57 530 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 ELOAQ14241 798 aaKnown RBP8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 NBPF20Q3BBV1 942 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 ZMIZ1Q9ULJ6 1067 aa8.77□□□□□ -1.01
ARHGAP28-209ENST00000579245 FAM196BA6NMK8 535 aa8.76□□□□□ -1.01
ARHGAP28-209ENST00000579245 SKOR1P84550 965 aa8.76□□□□□ -1.01
ARHGAP28-209ENST00000579245 TMEM164Q5U3C3 297 aa8.76□□□□□ -1.01
ARHGAP28-209ENST00000579245 STK32AQ8WU08 396 aa8.76□□□□□ -1.01
ARHGAP28-209ENST00000579245 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
ARHGAP28-209ENST00000579245 PTK7Q13308 1070 aa8.75□□□□□ -1.01
ARHGAP28-209ENST00000579245 TRMT44Q8IYL2 757 aaKnown RBP8.75□□□□□ -1.01
ARHGAP28-209ENST00000579245 OGFOD1Q8N543 542 aa8.75□□□□□ -1.01
ARHGAP28-209ENST00000579245 CDCA7Q9BWT1 371 aaPredicted RBP8.75□□□□□ -1.01
ARHGAP28-209ENST00000579245 CDV3Q9UKY7 258 aaKnown RBP8.75□□□□□ -1.01
ARHGAP28-209ENST00000579245 BRD1O95696 1058 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 VARSP26640 1264 aaKnown RBP8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 RPIAP49247 311 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 WNT7BP56706 349 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 ARID5BQ14865 1188 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 EHBP1Q8NDI1 1231 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 FAM200AQ8TCP9 573 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 KCTD15Q96SI1 283 aaPredicted RBP8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 PCDHB11Q9Y5F2 797 aa8.74□□□□□ -1.01
ARHGAP28-209ENST00000579245 ESPNB1AK53 854 aa8.73□□□□□ -1.01
ARHGAP28-209ENST00000579245 CD2BP2O95400 341 aaKnown RBP8.73□□□□□ -1.01
ARHGAP28-209ENST00000579245 CLDN10P78369 228 aa8.73□□□□□ -1.01
ARHGAP28-209ENST00000579245 VASH1Q7L8A9 365 aaPredicted RBP8.73□□□□□ -1.01
ARHGAP28-209ENST00000579245 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
ARHGAP28-209ENST00000579245 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
ARHGAP28-209ENST00000579245 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
ARHGAP28-209ENST00000579245 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
ARHGAP28-209ENST00000579245 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
ARHGAP28-209ENST00000579245 GTF2IP78347 998 aa8.71□□□□□ -1.02
ARHGAP28-209ENST00000579245 DPYDQ12882 1025 aa8.71□□□□□ -1.02
ARHGAP28-209ENST00000579245 USP4Q13107 963 aa8.71□□□□□ -1.02
ARHGAP28-209ENST00000579245 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
ARHGAP28-209ENST00000579245 GZF1Q9H116 711 aaPredicted RBP8.71□□□□□ -1.02
ARHGAP28-209ENST00000579245 ZBTB7BO15156 539 aaPredicted RBP8.7□□□□□ -1.02
ARHGAP28-209ENST00000579245 PSME1Q06323 249 aa8.7□□□□□ -1.02
ARHGAP28-209ENST00000579245 KCNA1Q09470 495 aa8.7□□□□□ -1.02
ARHGAP28-209ENST00000579245 INTS6LQ5JSJ4 861 aaKnown RBP8.7□□□□□ -1.02
ARHGAP28-209ENST00000579245 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
ARHGAP28-209ENST00000579245 KIAA1024Q9UPX6 916 aa8.7□□□□□ -1.02
ARHGAP28-209ENST00000579245 PATL2C9JE40 543 aaKnown RBP8.69□□□□□ -1.02
ARHGAP28-209ENST00000579245 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
ARHGAP28-209ENST00000579245 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
ARHGAP28-209ENST00000579245 ERVH48-1M5A8F1 160 aa8.68□□□□□ -1.02
ARHGAP28-209ENST00000579245 MMRN1Q13201 1228 aa8.68□□□□□ -1.02
ARHGAP28-209ENST00000579245 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
ARHGAP28-209ENST00000579245 CCDC102BQ68D86 513 aa8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 CCDC125Q86Z20 511 aa8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 ESF1Q9H501 851 aaKnown RBP8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 CCDC9Q9Y3X0 531 aaKnown RBP8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 PCDHGA11Q9Y5H2 935 aa8.67□□□□□ -1.02
ARHGAP28-209ENST00000579245 TLL2Q9Y6L7 1015 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms