RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
ARHGAP28-209ENST00000579245 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
ARHGAP28-209ENST00000579245 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
ARHGAP28-209ENST00000579245 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
ARHGAP28-209ENST00000579245 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
ARHGAP28-209ENST00000579245 FOXD1Q16676 465 aa16.66■□□□□ 0.26
ARHGAP28-209ENST00000579245 ADRA2BP18089 450 aa16.44■□□□□ 0.22
ARHGAP28-209ENST00000579245 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
ARHGAP28-209ENST00000579245 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
ARHGAP28-209ENST00000579245 KCNA4P22459 653 aa15.63■□□□□ 0.09
ARHGAP28-209ENST00000579245 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
ARHGAP28-209ENST00000579245 MSH5O43196 834 aa15.17■□□□□ 0.02
ARHGAP28-209ENST00000579245 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
ARHGAP28-209ENST00000579245 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
ARHGAP28-209ENST00000579245 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
ARHGAP28-209ENST00000579245 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
ARHGAP28-209ENST00000579245 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
ARHGAP28-209ENST00000579245 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
ARHGAP28-209ENST00000579245 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
ARHGAP28-209ENST00000579245 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
ARHGAP28-209ENST00000579245 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
ARHGAP28-209ENST00000579245 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
ARHGAP28-209ENST00000579245 ZBTB22O15209 634 aa14.38□□□□□ -0.11
ARHGAP28-209ENST00000579245 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
ARHGAP28-209ENST00000579245 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
ARHGAP28-209ENST00000579245 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
ARHGAP28-209ENST00000579245 SLC4A2P04920 1241 aa14□□□□□ -0.17
ARHGAP28-209ENST00000579245 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
ARHGAP28-209ENST00000579245 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
ARHGAP28-209ENST00000579245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
ARHGAP28-209ENST00000579245 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
ARHGAP28-209ENST00000579245 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
ARHGAP28-209ENST00000579245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
ARHGAP28-209ENST00000579245 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
ARHGAP28-209ENST00000579245 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
ARHGAP28-209ENST00000579245 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
ARHGAP28-209ENST00000579245 FKBP8Q14318 412 aa13.26□□□□□ -0.29
ARHGAP28-209ENST00000579245 APLP2Q06481 763 aa13.19□□□□□ -0.3
ARHGAP28-209ENST00000579245 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
ARHGAP28-209ENST00000579245 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
ARHGAP28-209ENST00000579245 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
ARHGAP28-209ENST00000579245 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
ARHGAP28-209ENST00000579245 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
ARHGAP28-209ENST00000579245 CAPN15O75808 1086 aa12.95□□□□□ -0.34
ARHGAP28-209ENST00000579245 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
ARHGAP28-209ENST00000579245 POLA2Q14181 598 aa12.88□□□□□ -0.35
ARHGAP28-209ENST00000579245 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
ARHGAP28-209ENST00000579245 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
ARHGAP28-209ENST00000579245 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
ARHGAP28-209ENST00000579245 FBLN2P98095 1184 aa12.82□□□□□ -0.36
ARHGAP28-209ENST00000579245 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
ARHGAP28-209ENST00000579245 ABCB7O75027 752 aa12.77□□□□□ -0.37
ARHGAP28-209ENST00000579245 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
ARHGAP28-209ENST00000579245 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
ARHGAP28-209ENST00000579245 DSG3P32926 999 aa12.58□□□□□ -0.4
ARHGAP28-209ENST00000579245 PROM2Q8N271 834 aa12.57□□□□□ -0.4
ARHGAP28-209ENST00000579245 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
ARHGAP28-209ENST00000579245 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
ARHGAP28-209ENST00000579245 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
ARHGAP28-209ENST00000579245 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
ARHGAP28-209ENST00000579245 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
ARHGAP28-209ENST00000579245 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
ARHGAP28-209ENST00000579245 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
ARHGAP28-209ENST00000579245 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
ARHGAP28-209ENST00000579245 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
ARHGAP28-209ENST00000579245 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
ARHGAP28-209ENST00000579245 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
ARHGAP28-209ENST00000579245 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
ARHGAP28-209ENST00000579245 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
ARHGAP28-209ENST00000579245 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
ARHGAP28-209ENST00000579245 MIER1Q8N108 512 aa12.12□□□□□ -0.47
ARHGAP28-209ENST00000579245 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
ARHGAP28-209ENST00000579245 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
ARHGAP28-209ENST00000579245 PKD2Q13563 968 aa12.07□□□□□ -0.48
ARHGAP28-209ENST00000579245 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
ARHGAP28-209ENST00000579245 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
ARHGAP28-209ENST00000579245 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
ARHGAP28-209ENST00000579245 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
ARHGAP28-209ENST00000579245 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
ARHGAP28-209ENST00000579245 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
ARHGAP28-209ENST00000579245 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
ARHGAP28-209ENST00000579245 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
ARHGAP28-209ENST00000579245 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
ARHGAP28-209ENST00000579245 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
ARHGAP28-209ENST00000579245 RGL2O15211 777 aa11.81□□□□□ -0.52
ARHGAP28-209ENST00000579245 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
ARHGAP28-209ENST00000579245 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
ARHGAP28-209ENST00000579245 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
ARHGAP28-209ENST00000579245 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
ARHGAP28-209ENST00000579245 NUBP1P53384 320 aa11.71□□□□□ -0.53
ARHGAP28-209ENST00000579245 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
ARHGAP28-209ENST00000579245 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.53
ARHGAP28-209ENST00000579245 GSE1Q14687 1217 aa11.7□□□□□ -0.54
ARHGAP28-209ENST00000579245 DCAF8Q5TAQ9 597 aa11.7□□□□□ -0.54
ARHGAP28-209ENST00000579245 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
ARHGAP28-209ENST00000579245 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
ARHGAP28-209ENST00000579245 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.54
ARHGAP28-209ENST00000579245 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
ARHGAP28-209ENST00000579245 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
ARHGAP28-209ENST00000579245 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms