RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
BRIP1-204ENST00000579028 BRD4O60885 1362 aaPredicted RBP12.78□□□□□ -0.36
BRIP1-204ENST00000579028 BCL9O00512 1426 aa12.78□□□□□ -0.36
BRIP1-204ENST00000579028 WNK3Q9BYP7 1800 aa12.77□□□□□ -0.37
BRIP1-204ENST00000579028 PTGER2P43116 358 aa12.77□□□□□ -0.37
BRIP1-204ENST00000579028 DDB1Q16531 1140 aa12.77□□□□□ -0.37
BRIP1-204ENST00000579028 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
BRIP1-204ENST00000579028 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
BRIP1-204ENST00000579028 PTF1AQ7RTS3 328 aa12.76□□□□□ -0.37
BRIP1-204ENST00000579028 PROM2Q8N271 834 aa12.76□□□□□ -0.37
BRIP1-204ENST00000579028 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
BRIP1-204ENST00000579028 SLIT3O75094 1523 aa12.76□□□□□ -0.37
BRIP1-204ENST00000579028 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
BRIP1-204ENST00000579028 COL18A1P39060 1754 aa12.75□□□□□ -0.37
BRIP1-204ENST00000579028 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
BRIP1-204ENST00000579028 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
BRIP1-204ENST00000579028 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
BRIP1-204ENST00000579028 CHD4Q14839 1912 aa12.74□□□□□ -0.37
BRIP1-204ENST00000579028 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
BRIP1-204ENST00000579028 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
BRIP1-204ENST00000579028 CDCA7Q9BWT1 371 aaPredicted RBP12.73□□□□□ -0.37
BRIP1-204ENST00000579028 USP6P35125 1406 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 WDR17Q8IZU2 1322 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 TOM1L2Q6ZVM7 507 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
BRIP1-204ENST00000579028 STK32BQ9NY57 414 aa12.72□□□□□ -0.37
BRIP1-204ENST00000579028 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
BRIP1-204ENST00000579028 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
BRIP1-204ENST00000579028 NLRP6P59044 892 aa12.71□□□□□ -0.37
BRIP1-204ENST00000579028 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
BRIP1-204ENST00000579028 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
BRIP1-204ENST00000579028 C1QTNF8P60827 252 aa12.7□□□□□ -0.38
BRIP1-204ENST00000579028 SRPK2P78362 688 aaKnown RBP12.7□□□□□ -0.38
BRIP1-204ENST00000579028 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
BRIP1-204ENST00000579028 CPSF1Q10570 1443 aaKnown RBP12.7□□□□□ -0.38
BRIP1-204ENST00000579028 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
BRIP1-204ENST00000579028 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
BRIP1-204ENST00000579028 CARD10Q9BWT7 1032 aa12.68□□□□□ -0.38
BRIP1-204ENST00000579028 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
BRIP1-204ENST00000579028 RGPD5Q99666 1765 aa12.68□□□□□ -0.38
BRIP1-204ENST00000579028 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
BRIP1-204ENST00000579028 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
BRIP1-204ENST00000579028 CENPJQ9HC77 1338 aaPredicted RBP12.67□□□□□ -0.38
BRIP1-204ENST00000579028 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
BRIP1-204ENST00000579028 ARHGEF25Q86VW2 580 aa12.67□□□□□ -0.38
BRIP1-204ENST00000579028 CABP1Q9NZU7 370 aa12.67□□□□□ -0.38
BRIP1-204ENST00000579028 TNS2Q63HR2 1409 aa12.67□□□□□ -0.38
BRIP1-204ENST00000579028 TRPM1Q7Z4N2 1603 aa12.66□□□□□ -0.38
BRIP1-204ENST00000579028 EXOC5O00471 708 aa12.66□□□□□ -0.38
BRIP1-204ENST00000579028 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
BRIP1-204ENST00000579028 CCDC7Q96M83 1385 aa12.66□□□□□ -0.38
BRIP1-204ENST00000579028 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
BRIP1-204ENST00000579028 ARXQ96QS3 562 aa12.65□□□□□ -0.38
BRIP1-204ENST00000579028 ABCC6O95255 1503 aa12.64□□□□□ -0.39
BRIP1-204ENST00000579028 NFAT5O94916 1531 aa12.63□□□□□ -0.39
BRIP1-204ENST00000579028 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
BRIP1-204ENST00000579028 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
BRIP1-204ENST00000579028 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
BRIP1-204ENST00000579028 TTC21BQ7Z4L5 1316 aa12.62□□□□□ -0.39
BRIP1-204ENST00000579028 BTAF1O14981 1849 aa12.62□□□□□ -0.39
BRIP1-204ENST00000579028 COL24A1Q17RW2 1714 aa12.62□□□□□ -0.39
BRIP1-204ENST00000579028 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
BRIP1-204ENST00000579028 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
BRIP1-204ENST00000579028 TTC21AQ8NDW8 1320 aa12.61□□□□□ -0.39
BRIP1-204ENST00000579028 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
BRIP1-204ENST00000579028 GPR162Q16538 588 aa12.6□□□□□ -0.39
BRIP1-204ENST00000579028 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
BRIP1-204ENST00000579028 ACSBG1Q96GR2 724 aa12.6□□□□□ -0.39
BRIP1-204ENST00000579028 EVC2Q86UK5 1308 aa12.6□□□□□ -0.39
BRIP1-204ENST00000579028 SOX12O15370 315 aa12.59□□□□□ -0.39
BRIP1-204ENST00000579028 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
BRIP1-204ENST00000579028 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
BRIP1-204ENST00000579028 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
BRIP1-204ENST00000579028 ERBB3P21860 1342 aa12.58□□□□□ -0.4
BRIP1-204ENST00000579028 IL2RBP14784 551 aa12.57□□□□□ -0.4
BRIP1-204ENST00000579028 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
BRIP1-204ENST00000579028 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
BRIP1-204ENST00000579028 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
BRIP1-204ENST00000579028 MON2Q7Z3U7 1717 aa12.56□□□□□ -0.4
BRIP1-204ENST00000579028 POLD1P28340 1107 aa12.55□□□□□ -0.4
BRIP1-204ENST00000579028 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
BRIP1-204ENST00000579028 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
BRIP1-204ENST00000579028 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
BRIP1-204ENST00000579028 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
BRIP1-204ENST00000579028 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
BRIP1-204ENST00000579028 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
BRIP1-204ENST00000579028 LTN1O94822 1766 aa12.53□□□□□ -0.4
BRIP1-204ENST00000579028 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
BRIP1-204ENST00000579028 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
BRIP1-204ENST00000579028 UTRNP46939 3433 aa12.53□□□□□ -0.4
BRIP1-204ENST00000579028 NLGN2Q8NFZ4 835 aa12.52□□□□□ -0.41
BRIP1-204ENST00000579028 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
BRIP1-204ENST00000579028 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
BRIP1-204ENST00000579028 LY75O60449 1722 aa12.51□□□□□ -0.41
BRIP1-204ENST00000579028 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
BRIP1-204ENST00000579028 YBX3P16989 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
BRIP1-204ENST00000579028 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms