RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.28
GGA3-206ENST00000578773 C14orf93Q9H972 538 aaKnown RBP16.83■□□□□ 0.28
GGA3-206ENST00000578773 CAPN15O75808 1086 aa16.82■□□□□ 0.28
GGA3-206ENST00000578773 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
GGA3-206ENST00000578773 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
GGA3-206ENST00000578773 POGKQ9P215 609 aa16.82■□□□□ 0.28
GGA3-206ENST00000578773 CRB1P82279 1406 aa16.81■□□□□ 0.28
GGA3-206ENST00000578773 THRAP3Q9Y2W1 955 aaKnown RBP16.81■□□□□ 0.28
GGA3-206ENST00000578773 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
GGA3-206ENST00000578773 ZNF827Q17R98 1081 aa16.8■□□□□ 0.28
GGA3-206ENST00000578773 KAT6BQ8WYB5 2073 aa16.79■□□□□ 0.28
GGA3-206ENST00000578773 CPDO75976 1380 aa16.79■□□□□ 0.28
GGA3-206ENST00000578773 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
GGA3-206ENST00000578773 DDB1Q16531 1140 aa16.78■□□□□ 0.28
GGA3-206ENST00000578773 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.28
GGA3-206ENST00000578773 ZNF526Q8TF50 670 aaPredicted RBP16.77■□□□□ 0.28
GGA3-206ENST00000578773 TRAK1Q9UPV9 953 aa16.77■□□□□ 0.28
GGA3-206ENST00000578773 USP19O94966 1318 aa16.76■□□□□ 0.27
GGA3-206ENST00000578773 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
GGA3-206ENST00000578773 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
GGA3-206ENST00000578773 BCL9O00512 1426 aa16.74■□□□□ 0.27
GGA3-206ENST00000578773 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
GGA3-206ENST00000578773 ADCY9O60503 1353 aa16.74■□□□□ 0.27
GGA3-206ENST00000578773 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
GGA3-206ENST00000578773 EIF3AQ14152 1382 aaKnown RBP16.73■□□□□ 0.27
GGA3-206ENST00000578773 WDR90Q96KV7 1748 aa16.72■□□□□ 0.27
GGA3-206ENST00000578773 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
GGA3-206ENST00000578773 GPBP1L1Q9HC44 474 aaPredicted RBP16.71■□□□□ 0.27
GGA3-206ENST00000578773 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
GGA3-206ENST00000578773 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
GGA3-206ENST00000578773 ACEP12821 1306 aa16.7■□□□□ 0.26
GGA3-206ENST00000578773 GCP02774 474 aa16.69■□□□□ 0.26
GGA3-206ENST00000578773 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
GGA3-206ENST00000578773 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
GGA3-206ENST00000578773 ACSBG1Q96GR2 724 aa16.69■□□□□ 0.26
GGA3-206ENST00000578773 PCNTO95613 3336 aa16.69■□□□□ 0.26
GGA3-206ENST00000578773 SLIT3O75094 1523 aa16.68■□□□□ 0.26
GGA3-206ENST00000578773 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
GGA3-206ENST00000578773 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
GGA3-206ENST00000578773 AXIN2Q9Y2T1 843 aa16.67■□□□□ 0.26
GGA3-206ENST00000578773 PNPLA7Q6ZV29 1317 aa16.67■□□□□ 0.26
GGA3-206ENST00000578773 KIF3CO14782 793 aa16.65■□□□□ 0.26
GGA3-206ENST00000578773 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
GGA3-206ENST00000578773 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
GGA3-206ENST00000578773 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
GGA3-206ENST00000578773 KCNQ4P56696 695 aa16.64■□□□□ 0.25
GGA3-206ENST00000578773 WDR17Q8IZU2 1322 aa16.63■□□□□ 0.25
GGA3-206ENST00000578773 LY75O60449 1722 aa16.62■□□□□ 0.25
GGA3-206ENST00000578773 ABCC6O95255 1503 aa16.62■□□□□ 0.25
GGA3-206ENST00000578773 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
GGA3-206ENST00000578773 POLD1P28340 1107 aa16.62■□□□□ 0.25
GGA3-206ENST00000578773 HTRA3P83110 453 aa16.62■□□□□ 0.25
GGA3-206ENST00000578773 USP6P35125 1406 aa16.61■□□□□ 0.25
GGA3-206ENST00000578773 CDK19Q9BWU1 502 aa16.6■□□□□ 0.25
GGA3-206ENST00000578773 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
GGA3-206ENST00000578773 PRELPP51888 382 aa16.59■□□□□ 0.25
GGA3-206ENST00000578773 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
GGA3-206ENST00000578773 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
GGA3-206ENST00000578773 APLP1P51693 650 aa16.58■□□□□ 0.24
GGA3-206ENST00000578773 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
GGA3-206ENST00000578773 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
GGA3-206ENST00000578773 SLC34A2O95436 690 aa16.57■□□□□ 0.24
GGA3-206ENST00000578773 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
GGA3-206ENST00000578773 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
GGA3-206ENST00000578773 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
GGA3-206ENST00000578773 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
GGA3-206ENST00000578773 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
GGA3-206ENST00000578773 EXOC5O00471 708 aa16.56■□□□□ 0.24
GGA3-206ENST00000578773 PPIP5K1Q6PFW1 1433 aa16.55■□□□□ 0.24
GGA3-206ENST00000578773 QRICH2Q9H0J4 1663 aa16.55■□□□□ 0.24
GGA3-206ENST00000578773 CDCA7Q9BWT1 371 aaPredicted RBP16.54■□□□□ 0.24
GGA3-206ENST00000578773 CARD10Q9BWT7 1032 aa16.54■□□□□ 0.24
GGA3-206ENST00000578773 CCDC61Q9Y6R9 512 aa16.53■□□□□ 0.24
GGA3-206ENST00000578773 NFAT5O94916 1531 aa16.52■□□□□ 0.24
GGA3-206ENST00000578773 NLRP6P59044 892 aa16.52■□□□□ 0.24
GGA3-206ENST00000578773 TFCP2L1Q9NZI6 479 aa16.52■□□□□ 0.24
GGA3-206ENST00000578773 LTN1O94822 1766 aa16.51■□□□□ 0.23
GGA3-206ENST00000578773 USP54Q70EL1 1684 aa16.51■□□□□ 0.23
GGA3-206ENST00000578773 SOX12O15370 315 aa16.51■□□□□ 0.23
GGA3-206ENST00000578773 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
GGA3-206ENST00000578773 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
GGA3-206ENST00000578773 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
GGA3-206ENST00000578773 C5P01031 1676 aa16.5■□□□□ 0.23
GGA3-206ENST00000578773 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
GGA3-206ENST00000578773 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
GGA3-206ENST00000578773 COL23A1Q86Y22 540 aaPredicted RBP16.49■□□□□ 0.23
GGA3-206ENST00000578773 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
GGA3-206ENST00000578773 ARHGEF25Q86VW2 580 aa16.48■□□□□ 0.23
GGA3-206ENST00000578773 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
GGA3-206ENST00000578773 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
GGA3-206ENST00000578773 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
GGA3-206ENST00000578773 MSH5O43196 834 aa16.47■□□□□ 0.23
GGA3-206ENST00000578773 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
GGA3-206ENST00000578773 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
GGA3-206ENST00000578773 CABP2Q9NPB3 220 aa16.45■□□□□ 0.22
GGA3-206ENST00000578773 NSD2O96028 1365 aa16.45■□□□□ 0.22
GGA3-206ENST00000578773 RGPD2P0DJD1 1756 aa16.45■□□□□ 0.22
GGA3-206ENST00000578773 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
GGA3-206ENST00000578773 TOMM70O94826 608 aa16.44■□□□□ 0.22
GGA3-206ENST00000578773 SLC27A3Q5K4L6 730 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms