RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 MTHFSP49914 203 aa16.38■□□□□ 0.21
IFT20-207ENST00000578547 FNBP4Q8N3X1 1017 aaPredicted RBP16.38■□□□□ 0.21
IFT20-207ENST00000578547 BTG4Q9NY30 223 aa16.38■□□□□ 0.21
IFT20-207ENST00000578547 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
IFT20-207ENST00000578547 RTL1A6NKG5 1358 aa16.37■□□□□ 0.21
IFT20-207ENST00000578547 FLT4P35916 1363 aa16.37■□□□□ 0.21
IFT20-207ENST00000578547 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
IFT20-207ENST00000578547 HOXC9P31274 260 aa16.36■□□□□ 0.21
IFT20-207ENST00000578547 IP6K1Q92551 441 aa16.36■□□□□ 0.21
IFT20-207ENST00000578547 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
IFT20-207ENST00000578547 SLIT2O94813 1529 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 MIER1Q8N108 512 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
IFT20-207ENST00000578547 USP21Q9UK80 565 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 COL18A1P39060 1754 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 ABCC6O95255 1503 aa16.35■□□□□ 0.21
IFT20-207ENST00000578547 CAMTA1Q9Y6Y1 1673 aa16.34■□□□□ 0.21
IFT20-207ENST00000578547 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
IFT20-207ENST00000578547 UNC5CLQ8IV45 518 aa16.34■□□□□ 0.21
IFT20-207ENST00000578547 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
IFT20-207ENST00000578547 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
IFT20-207ENST00000578547 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
IFT20-207ENST00000578547 RGPD5Q99666 1765 aa16.33■□□□□ 0.21
IFT20-207ENST00000578547 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
IFT20-207ENST00000578547 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.2
IFT20-207ENST00000578547 INSRP06213 1382 aa16.32■□□□□ 0.2
IFT20-207ENST00000578547 EVA1CP58658 441 aa16.32■□□□□ 0.2
IFT20-207ENST00000578547 ZNF772Q68DY9 489 aaPredicted RBP16.31■□□□□ 0.2
IFT20-207ENST00000578547 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
IFT20-207ENST00000578547 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
IFT20-207ENST00000578547 COL5A2P05997 1499 aaPredicted RBP16.3■□□□□ 0.2
IFT20-207ENST00000578547 CSB-PGBD3P0DP91 1061 aa16.3■□□□□ 0.2
IFT20-207ENST00000578547 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
IFT20-207ENST00000578547 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
IFT20-207ENST00000578547 NWD2Q9ULI1 1742 aa16.3■□□□□ 0.2
IFT20-207ENST00000578547 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
IFT20-207ENST00000578547 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
IFT20-207ENST00000578547 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
IFT20-207ENST00000578547 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
IFT20-207ENST00000578547 MRS2Q9HD23 443 aa16.29■□□□□ 0.2
IFT20-207ENST00000578547 ERBB3P21860 1342 aa16.28■□□□□ 0.2
IFT20-207ENST00000578547 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
IFT20-207ENST00000578547 VPS72Q15906 364 aa16.28■□□□□ 0.2
IFT20-207ENST00000578547 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
IFT20-207ENST00000578547 ATRNO75882 1429 aa16.28■□□□□ 0.2
IFT20-207ENST00000578547 WDR17Q8IZU2 1322 aa16.27■□□□□ 0.2
IFT20-207ENST00000578547 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
IFT20-207ENST00000578547 U2SURPO15042 1029 aaKnown RBP16.26■□□□□ 0.19
IFT20-207ENST00000578547 TOM1L2Q6ZVM7 507 aa16.26■□□□□ 0.19
IFT20-207ENST00000578547 SPATA31A5Q5VU36 1347 aa16.25■□□□□ 0.19
IFT20-207ENST00000578547 SPATA31A7Q8IWB4 1347 aa16.25■□□□□ 0.19
IFT20-207ENST00000578547 FAM208AQ9UK61 1670 aaKnown RBP16.25■□□□□ 0.19
IFT20-207ENST00000578547 IL13P35225 146 aa16.25■□□□□ 0.19
IFT20-207ENST00000578547 GJD4Q96KN9 370 aaPredicted RBP16.25■□□□□ 0.19
IFT20-207ENST00000578547 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
IFT20-207ENST00000578547 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
IFT20-207ENST00000578547 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
IFT20-207ENST00000578547 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
IFT20-207ENST00000578547 USP35Q9P2H5 1018 aa16.24■□□□□ 0.19
IFT20-207ENST00000578547 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.24■□□□□ 0.19
IFT20-207ENST00000578547 SPATA31A1Q5TZJ5 1347 aa16.23■□□□□ 0.19
IFT20-207ENST00000578547 CRB1P82279 1406 aa16.23■□□□□ 0.19
IFT20-207ENST00000578547 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
IFT20-207ENST00000578547 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
IFT20-207ENST00000578547 NBPF4Q96M43 638 aa16.23■□□□□ 0.19
IFT20-207ENST00000578547 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
IFT20-207ENST00000578547 NUDCQ9Y266 331 aa16.23■□□□□ 0.19
IFT20-207ENST00000578547 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
IFT20-207ENST00000578547 RXRBP28702 533 aa16.22■□□□□ 0.19
IFT20-207ENST00000578547 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
IFT20-207ENST00000578547 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
IFT20-207ENST00000578547 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
IFT20-207ENST00000578547 TCP11L2Q8N4U5 519 aa16.21■□□□□ 0.19
IFT20-207ENST00000578547 EYA1Q99502 592 aa16.21■□□□□ 0.19
IFT20-207ENST00000578547 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
IFT20-207ENST00000578547 HMOX1P09601 288 aa16.2■□□□□ 0.18
IFT20-207ENST00000578547 GLI3P10071 1580 aa16.19■□□□□ 0.18
IFT20-207ENST00000578547 FAM98CQ17RN3 349 aaKnown RBP16.19■□□□□ 0.18
IFT20-207ENST00000578547 SULT6B1Q6IMI4 303 aa16.19■□□□□ 0.18
IFT20-207ENST00000578547 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
IFT20-207ENST00000578547 ONECUT3O60422 494 aaPredicted RBP16.18■□□□□ 0.18
IFT20-207ENST00000578547 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
IFT20-207ENST00000578547 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
IFT20-207ENST00000578547 BARGINQ6ZT62 677 aa16.17■□□□□ 0.18
IFT20-207ENST00000578547 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
IFT20-207ENST00000578547 NCAPD2Q15021 1401 aa16.16■□□□□ 0.18
IFT20-207ENST00000578547 SEPT12Q8IYM1 358 aa16.15■□□□□ 0.18
IFT20-207ENST00000578547 ADAMTS8Q9UP79 889 aa16.15■□□□□ 0.18
IFT20-207ENST00000578547 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
IFT20-207ENST00000578547 MEGF6O75095 1541 aa16.14■□□□□ 0.18
IFT20-207ENST00000578547 RAPGEF4Q8WZA2 1011 aa16.14■□□□□ 0.17
IFT20-207ENST00000578547 KDRP35968 1356 aa16.13■□□□□ 0.17
IFT20-207ENST00000578547 A0A0G2JS52 829 aa16.13■□□□□ 0.17
IFT20-207ENST00000578547 IL2RBP14784 551 aa16.13■□□□□ 0.17
IFT20-207ENST00000578547 PRKAR2BP31323 418 aa16.13■□□□□ 0.17
IFT20-207ENST00000578547 MYT1Q01538 1121 aa16.13■□□□□ 0.17
IFT20-207ENST00000578547 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
IFT20-207ENST00000578547 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms