RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 ABCC6O95255 1503 aa31.95■■■□□ 2.71
LIMD2-204ENST00000578297 SEPT12Q8IYM1 358 aa31.95■■■□□ 2.71
LIMD2-204ENST00000578297 FAM98CQ17RN3 349 aaKnown RBP31.94■■■□□ 2.7
LIMD2-204ENST00000578297 GGNBP2Q9H3C7 697 aa31.94■■■□□ 2.7
LIMD2-204ENST00000578297 KIF20BQ96Q89 1820 aa31.93■■■□□ 2.7
LIMD2-204ENST00000578297 KIF7Q2M1P5 1343 aa31.92■■■□□ 2.7
LIMD2-204ENST00000578297 LTN1O94822 1766 aa31.91■■■□□ 2.7
LIMD2-204ENST00000578297 RGPD5Q99666 1765 aa31.9■■■□□ 2.7
LIMD2-204ENST00000578297 PANK3Q9H999 370 aa31.9■■■□□ 2.7
LIMD2-204ENST00000578297 CRB1P82279 1406 aa31.89■■■□□ 2.7
LIMD2-204ENST00000578297 USP35Q9P2H5 1018 aa31.88■■■□□ 2.69
LIMD2-204ENST00000578297 CGNL1Q0VF96 1302 aa31.88■■■□□ 2.69
LIMD2-204ENST00000578297 WDR17Q8IZU2 1322 aa31.88■■■□□ 2.69
LIMD2-204ENST00000578297 BRWD3Q6RI45 1802 aa31.88■■■□□ 2.69
LIMD2-204ENST00000578297 BARGINQ6ZT62 677 aa31.87■■■□□ 2.69
LIMD2-204ENST00000578297 THRAP3Q9Y2W1 955 aaKnown RBP31.87■■■□□ 2.69
LIMD2-204ENST00000578297 A0A0G2JS52 829 aa31.86■■■□□ 2.69
LIMD2-204ENST00000578297 MYT1Q01538 1121 aa31.86■■■□□ 2.69
LIMD2-204ENST00000578297 TCP11L2Q8N4U5 519 aa31.86■■■□□ 2.69
LIMD2-204ENST00000578297 UPF1Q92900 1129 aaKnown RBP eCLIP31.86■■■□□ 2.692e-6■■□□□ 12.9
LIMD2-204ENST00000578297 THSD7AQ9UPZ6 1657 aa31.86■■■□□ 2.69
LIMD2-204ENST00000578297 TOM1L2Q6ZVM7 507 aa31.84■■■□□ 2.69
LIMD2-204ENST00000578297 FBLN1P23142 703 aa31.83■■■□□ 2.69
LIMD2-204ENST00000578297 IP6K1Q92551 441 aa31.83■■■□□ 2.69
LIMD2-204ENST00000578297 MAP3K19Q56UN5 1328 aa31.82■■■□□ 2.68
LIMD2-204ENST00000578297 KRT27Q7Z3Y8 459 aa31.82■■■□□ 2.68
LIMD2-204ENST00000578297 CSB-PGBD3P0DP91 1061 aa31.81■■■□□ 2.68
LIMD2-204ENST00000578297 BLMP54132 1417 aaPredicted RBP31.81■■■□□ 2.68
LIMD2-204ENST00000578297 EP400Q96L91 3159 aa31.8■■■□□ 2.68
LIMD2-204ENST00000578297 ERBB3P21860 1342 aa31.79■■■□□ 2.68
LIMD2-204ENST00000578297 CCDC7Q96M83 1385 aa31.79■■■□□ 2.68
LIMD2-204ENST00000578297 CARD10Q9BWT7 1032 aa31.78■■■□□ 2.68
LIMD2-204ENST00000578297 WASHC2AQ641Q2 1341 aa31.77■■■□□ 2.68
LIMD2-204ENST00000578297 AMPHP49418 695 aa31.77■■■□□ 2.68
LIMD2-204ENST00000578297 RRS1Q15050 365 aaKnown RBP31.77■■■□□ 2.68
LIMD2-204ENST00000578297 HOXC9P31274 260 aa31.76■■■□□ 2.67
LIMD2-204ENST00000578297 ANKRD24Q8TF21 1146 aa31.76■■■□□ 2.67
LIMD2-204ENST00000578297 RTL1A6NKG5 1358 aa31.75■■■□□ 2.67
LIMD2-204ENST00000578297 ANKRD26Q9UPS8 1709 aa31.73■■■□□ 2.67
LIMD2-204ENST00000578297 KNSTRNQ9Y448 316 aa31.73■■■□□ 2.67
LIMD2-204ENST00000578297 NSD2O96028 1365 aa31.72■■■□□ 2.67
LIMD2-204ENST00000578297 KIF24Q5T7B8 1368 aa31.71■■■□□ 2.67
LIMD2-204ENST00000578297 PARP4Q9UKK3 1724 aaKnown RBP31.7■■■□□ 2.67
LIMD2-204ENST00000578297 CDCA7Q9BWT1 371 aaPredicted RBP31.7■■■□□ 2.67
LIMD2-204ENST00000578297 NLRP2Q9NX02 1062 aa31.7■■■□□ 2.67
LIMD2-204ENST00000578297 CCDC125Q86Z20 511 aa31.68■■■□□ 2.66
LIMD2-204ENST00000578297 WNK3Q9BYP7 1800 aa31.68■■■□□ 2.66
LIMD2-204ENST00000578297 FLT4P35916 1363 aa31.67■■■□□ 2.66
LIMD2-204ENST00000578297 PER1O15534 1290 aaPredicted RBP31.66■■■□□ 2.66
LIMD2-204ENST00000578297 PDE3BQ13370 1112 aa31.66■■■□□ 2.66
LIMD2-204ENST00000578297 LTV1Q96GA3 475 aaPredicted RBP31.66■■■□□ 2.66
LIMD2-204ENST00000578297 FAM208AQ9UK61 1670 aaKnown RBP31.66■■■□□ 2.66
LIMD2-204ENST00000578297 PEAK1Q9H792 1746 aa31.66■■■□□ 2.66
LIMD2-204ENST00000578297 DISP2A7MBM2 1401 aa31.66■■■□□ 2.66
LIMD2-204ENST00000578297 EMILIN1Q9Y6C2 1016 aa31.65■■■□□ 2.66
LIMD2-204ENST00000578297 AMER1Q5JTC6 1135 aaPredicted RBP31.64■■■□□ 2.66
LIMD2-204ENST00000578297 FAM182BQ5T319 152 aa31.64■■■□□ 2.66
LIMD2-204ENST00000578297 INSRP06213 1382 aa31.64■■■□□ 2.66
LIMD2-204ENST00000578297 MAP2P11137 1827 aaKnown RBP31.63■■■□□ 2.65
LIMD2-204ENST00000578297 DDB1Q16531 1140 aa31.62■■■□□ 2.65
LIMD2-204ENST00000578297 HSP90AB2PQ58FF8 381 aa31.62■■■□□ 2.65
LIMD2-204ENST00000578297 LRRC37A3O60309 1634 aa31.61■■■□□ 2.65
LIMD2-204ENST00000578297 POLKQ9UBT6 870 aa31.61■■■□□ 2.65
LIMD2-204ENST00000578297 TNNT2P45379 298 aaPredicted RBP31.6■■■□□ 2.65
LIMD2-204ENST00000578297 FAM196AQ6ZSG2 479 aa31.6■■■□□ 2.65
LIMD2-204ENST00000578297 MORC1Q86VD1 984 aa31.6■■■□□ 2.65
LIMD2-204ENST00000578297 SMG6Q86US8 1419 aaKnown RBP31.59■■■□□ 2.65
LIMD2-204ENST00000578297 PPM1GO15355 546 aaPredicted RBP31.58■■■□□ 2.65
LIMD2-204ENST00000578297 ZEB1P37275 1124 aaPredicted RBP31.58■■■□□ 2.65
LIMD2-204ENST00000578297 IL2RBP14784 551 aa31.57■■■□□ 2.64
LIMD2-204ENST00000578297 EXOC5O00471 708 aa31.56■■■□□ 2.64
LIMD2-204ENST00000578297 RGPD2P0DJD1 1756 aa31.55■■■□□ 2.64
LIMD2-204ENST00000578297 NBPF6Q5VWK0 638 aa31.54■■■□□ 2.64
LIMD2-204ENST00000578297 NBPF4Q96M43 638 aa31.54■■■□□ 2.64
LIMD2-204ENST00000578297 SF3B2Q13435 895 aaKnown RBP31.53■■■□□ 2.64
LIMD2-204ENST00000578297 NPC1L1Q9UHC9 1359 aa31.52■■■□□ 2.64
LIMD2-204ENST00000578297 TNS2Q63HR2 1409 aa31.51■■■□□ 2.64
LIMD2-204ENST00000578297 OVOS2A0A0G2JMS6 1433 aa31.5■■■□□ 2.63
LIMD2-204ENST00000578297 MARCH10Q8NA82 808 aaPredicted RBP31.5■■■□□ 2.63
LIMD2-204ENST00000578297 RGPD1P0DJD0 1748 aa31.49■■■□□ 2.63
LIMD2-204ENST00000578297 CC2D1BQ5T0F9 858 aaKnown RBP31.48■■■□□ 2.63
LIMD2-204ENST00000578297 TRIM37O94972 964 aa31.46■■■□□ 2.63
LIMD2-204ENST00000578297 USHBP1Q8N6Y0 703 aa31.46■■■□□ 2.63
LIMD2-204ENST00000578297 BCL9O00512 1426 aa31.46■■■□□ 2.63
LIMD2-204ENST00000578297 DEFB132Q7Z7B7 95 aa31.43■■■□□ 2.62
LIMD2-204ENST00000578297 TNS1Q9HBL0 1735 aaKnown RBP31.43■■■□□ 2.62
LIMD2-204ENST00000578297 BAG6P46379 1132 aa31.42■■■□□ 2.62
LIMD2-204ENST00000578297 EIF4A2Q14240 407 aaKnown RBP31.42■■■□□ 2.62
LIMD2-204ENST00000578297 MEGF6O75095 1541 aa31.42■■■□□ 2.62
LIMD2-204ENST00000578297 NCAPD2Q15021 1401 aa31.41■■■□□ 2.62
LIMD2-204ENST00000578297 RAPGEF4Q8WZA2 1011 aa31.4■■■□□ 2.62
LIMD2-204ENST00000578297 EYA1Q99502 592 aa31.4■■■□□ 2.62
LIMD2-204ENST00000578297 SBF2Q86WG5 1849 aa31.39■■■□□ 2.62
LIMD2-204ENST00000578297 TATP17735 454 aaPredicted RBP31.37■■■□□ 2.61
LIMD2-204ENST00000578297 ZCRB1Q8TBF4 217 aaKnown RBP31.37■■■□□ 2.61
LIMD2-204ENST00000578297 APBA3O96018 575 aa31.35■■■□□ 2.61
LIMD2-204ENST00000578297 MTHFSP49914 203 aa31.35■■■□□ 2.61
LIMD2-204ENST00000578297 CNGB1Q14028 1251 aaPredicted RBP31.35■■■□□ 2.61
LIMD2-204ENST00000578297 DDX54Q8TDD1 881 aaKnown RBP31.34■■■□□ 2.61
LIMD2-204ENST00000578297 EN1Q05925 392 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms