RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
CDK5RAP3-203ENST00000577442 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-203ENST00000577442 EVA1CP58658 441 aa17.44■□□□□ 0.38
CDK5RAP3-203ENST00000577442 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
CDK5RAP3-203ENST00000577442 GLI3P10071 1580 aa17.44■□□□□ 0.38
CDK5RAP3-203ENST00000577442 RGS12O14924 1447 aa17.42■□□□□ 0.38
CDK5RAP3-203ENST00000577442 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
CDK5RAP3-203ENST00000577442 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
CDK5RAP3-203ENST00000577442 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
CDK5RAP3-203ENST00000577442 BLMP54132 1417 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-203ENST00000577442 RGPD5Q99666 1765 aa17.4■□□□□ 0.38
CDK5RAP3-203ENST00000577442 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
CDK5RAP3-203ENST00000577442 CRB1P82279 1406 aa17.39■□□□□ 0.38
CDK5RAP3-203ENST00000577442 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
CDK5RAP3-203ENST00000577442 SPATA31A1Q5TZJ5 1347 aa17.39■□□□□ 0.37
CDK5RAP3-203ENST00000577442 WDR17Q8IZU2 1322 aa17.39■□□□□ 0.37
CDK5RAP3-203ENST00000577442 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
CDK5RAP3-203ENST00000577442 AMPHP49418 695 aa17.38■□□□□ 0.37
CDK5RAP3-203ENST00000577442 IP6K1Q92551 441 aa17.38■□□□□ 0.37
CDK5RAP3-203ENST00000577442 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
CDK5RAP3-203ENST00000577442 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-203ENST00000577442 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 RRS1Q15050 365 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 TOM1L2Q6ZVM7 507 aa17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 ERBB3P21860 1342 aa17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 FLT4P35916 1363 aa17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
CDK5RAP3-203ENST00000577442 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 A0A0G2JS52 829 aa17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 HOXC9P31274 260 aa17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 MYT1Q01538 1121 aa17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
CDK5RAP3-203ENST00000577442 PER1O15534 1290 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-203ENST00000577442 ONECUT3O60422 494 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-203ENST00000577442 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
CDK5RAP3-203ENST00000577442 SMG6Q86US8 1419 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-203ENST00000577442 THSD7AQ9UPZ6 1657 aa17.34■□□□□ 0.37
CDK5RAP3-203ENST00000577442 SOCS7O14512 581 aa17.33■□□□□ 0.36
CDK5RAP3-203ENST00000577442 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
CDK5RAP3-203ENST00000577442 ANKRD24Q8TF21 1146 aa17.33■□□□□ 0.36
CDK5RAP3-203ENST00000577442 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.36
CDK5RAP3-203ENST00000577442 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
CDK5RAP3-203ENST00000577442 FBLN1P23142 703 aa17.32■□□□□ 0.36
CDK5RAP3-203ENST00000577442 WNK3Q9BYP7 1800 aa17.32■□□□□ 0.36
CDK5RAP3-203ENST00000577442 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
CDK5RAP3-203ENST00000577442 INSRP06213 1382 aa17.31■□□□□ 0.36
CDK5RAP3-203ENST00000577442 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
CDK5RAP3-203ENST00000577442 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-203ENST00000577442 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
CDK5RAP3-203ENST00000577442 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
CDK5RAP3-203ENST00000577442 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP3-203ENST00000577442 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-203ENST00000577442 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-203ENST00000577442 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-203ENST00000577442 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-203ENST00000577442 KRT27Q7Z3Y8 459 aa17.28■□□□□ 0.36
CDK5RAP3-203ENST00000577442 POLKQ9UBT6 870 aa17.28■□□□□ 0.36
CDK5RAP3-203ENST00000577442 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
CDK5RAP3-203ENST00000577442 DISP2A7MBM2 1401 aa17.25■□□□□ 0.35
CDK5RAP3-203ENST00000577442 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
CDK5RAP3-203ENST00000577442 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
CDK5RAP3-203ENST00000577442 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
CDK5RAP3-203ENST00000577442 DDB1Q16531 1140 aa17.23■□□□□ 0.35
CDK5RAP3-203ENST00000577442 EP400Q96L91 3159 aa17.23■□□□□ 0.35
CDK5RAP3-203ENST00000577442 IL2RBP14784 551 aa17.22■□□□□ 0.35
CDK5RAP3-203ENST00000577442 TNS2Q63HR2 1409 aa17.21■□□□□ 0.35
CDK5RAP3-203ENST00000577442 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-203ENST00000577442 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-203ENST00000577442 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
CDK5RAP3-203ENST00000577442 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
CDK5RAP3-203ENST00000577442 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-203ENST00000577442 EXOC5O00471 708 aa17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 MTHFSP49914 203 aa17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 EIF4A2Q14240 407 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 NCAPD2Q15021 1401 aa17.18■□□□□ 0.34
CDK5RAP3-203ENST00000577442 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
CDK5RAP3-203ENST00000577442 USHBP1Q8N6Y0 703 aa17.16■□□□□ 0.34
CDK5RAP3-203ENST00000577442 MEGF6O75095 1541 aa17.16■□□□□ 0.34
CDK5RAP3-203ENST00000577442 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
CDK5RAP3-203ENST00000577442 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
CDK5RAP3-203ENST00000577442 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-203ENST00000577442 EYA1Q99502 592 aa17.15■□□□□ 0.34
CDK5RAP3-203ENST00000577442 RGPD1P0DJD0 1748 aa17.15■□□□□ 0.34
CDK5RAP3-203ENST00000577442 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
CDK5RAP3-203ENST00000577442 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
CDK5RAP3-203ENST00000577442 KAT6BQ8WYB5 2073 aa17.14■□□□□ 0.33
CDK5RAP3-203ENST00000577442 BCL9O00512 1426 aa17.13■□□□□ 0.33
CDK5RAP3-203ENST00000577442 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-203ENST00000577442 RALBP1Q15311 655 aa17.13■□□□□ 0.33
CDK5RAP3-203ENST00000577442 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-203ENST00000577442 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
CDK5RAP3-203ENST00000577442 FAM182BQ5T319 152 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms