RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 COL5A2P05997 1499 aaPredicted RBP26.91■■□□□ 1.9
SCO1-202ENST00000577335 SOCS7O14512 581 aa26.9■■□□□ 1.9
SCO1-202ENST00000577335 RGS12O14924 1447 aa26.9■■□□□ 1.9
SCO1-202ENST00000577335 GLI3P10071 1580 aa26.89■■□□□ 1.9
SCO1-202ENST00000577335 NSD2O96028 1365 aa26.89■■□□□ 1.9
SCO1-202ENST00000577335 AXIN2Q9Y2T1 843 aa26.89■■□□□ 1.9
SCO1-202ENST00000577335 SPATA31A1Q5TZJ5 1347 aa26.89■■□□□ 1.89
SCO1-202ENST00000577335 KNSTRNQ9Y448 316 aa26.88■■□□□ 1.89
SCO1-202ENST00000577335 COL18A1P39060 1754 aa26.87■■□□□ 1.89
SCO1-202ENST00000577335 KIF20BQ96Q89 1820 aa26.86■■□□□ 1.89
SCO1-202ENST00000577335 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
SCO1-202ENST00000577335 IP6K1Q92551 441 aa26.85■■□□□ 1.89
SCO1-202ENST00000577335 THRAP3Q9Y2W1 955 aaKnown RBP26.85■■□□□ 1.89
SCO1-202ENST00000577335 MAP3K19Q56UN5 1328 aa26.85■■□□□ 1.89
SCO1-202ENST00000577335 WDR17Q8IZU2 1322 aa26.85■■□□□ 1.89
SCO1-202ENST00000577335 BLMP54132 1417 aaPredicted RBP26.84■■□□□ 1.89
SCO1-202ENST00000577335 CRB1P82279 1406 aa26.84■■□□□ 1.89
SCO1-202ENST00000577335 BARGINQ6ZT62 677 aa26.83■■□□□ 1.89
SCO1-202ENST00000577335 RTL1A6NKG5 1358 aa26.83■■□□□ 1.88
SCO1-202ENST00000577335 KIF24Q5T7B8 1368 aa26.83■■□□□ 1.88
SCO1-202ENST00000577335 TCP11L2Q8N4U5 519 aa26.82■■□□□ 1.88
SCO1-202ENST00000577335 AMPHP49418 695 aa26.81■■□□□ 1.88
SCO1-202ENST00000577335 FAM98CQ17RN3 349 aaKnown RBP26.81■■□□□ 1.88
SCO1-202ENST00000577335 SEPT12Q8IYM1 358 aa26.81■■□□□ 1.88
SCO1-202ENST00000577335 PER1O15534 1290 aaPredicted RBP26.8■■□□□ 1.88
SCO1-202ENST00000577335 CSB-PGBD3P0DP91 1061 aa26.8■■□□□ 1.88
SCO1-202ENST00000577335 TOM1L2Q6ZVM7 507 aa26.8■■□□□ 1.88
SCO1-202ENST00000577335 ERBB3P21860 1342 aa26.8■■□□□ 1.88
SCO1-202ENST00000577335 HOXC9P31274 260 aa26.78■■□□□ 1.88
SCO1-202ENST00000577335 AMER1Q5JTC6 1135 aaPredicted RBP26.78■■□□□ 1.88
SCO1-202ENST00000577335 CARD10Q9BWT7 1032 aa26.78■■□□□ 1.88
SCO1-202ENST00000577335 LTN1O94822 1766 aa26.77■■□□□ 1.88
SCO1-202ENST00000577335 FBLN1P23142 703 aa26.77■■□□□ 1.88
SCO1-202ENST00000577335 RRS1Q15050 365 aaKnown RBP26.77■■□□□ 1.88
SCO1-202ENST00000577335 ANKRD24Q8TF21 1146 aa26.77■■□□□ 1.88
SCO1-202ENST00000577335 USP35Q9P2H5 1018 aa26.77■■□□□ 1.88
SCO1-202ENST00000577335 NPC1L1Q9UHC9 1359 aa26.75■■□□□ 1.87
SCO1-202ENST00000577335 A0A0G2JS52 829 aa26.75■■□□□ 1.87
SCO1-202ENST00000577335 MYT1Q01538 1121 aa26.75■■□□□ 1.87
SCO1-202ENST00000577335 FLT4P35916 1363 aa26.74■■□□□ 1.87
SCO1-202ENST00000577335 MORC1Q86VD1 984 aa26.74■■□□□ 1.87
SCO1-202ENST00000577335 CDCA7Q9BWT1 371 aaPredicted RBP26.74■■□□□ 1.87
SCO1-202ENST00000577335 ANKRD26Q9UPS8 1709 aa26.73■■□□□ 1.87
SCO1-202ENST00000577335 INSRP06213 1382 aa26.72■■□□□ 1.87
SCO1-202ENST00000577335 THSD7AQ9UPZ6 1657 aa26.71■■□□□ 1.87
SCO1-202ENST00000577335 KRT27Q7Z3Y8 459 aa26.71■■□□□ 1.87
SCO1-202ENST00000577335 NLRP2Q9NX02 1062 aa26.7■■□□□ 1.86
SCO1-202ENST00000577335 POLKQ9UBT6 870 aa26.7■■□□□ 1.86
SCO1-202ENST00000577335 EMILIN1Q9Y6C2 1016 aa26.69■■□□□ 1.86
SCO1-202ENST00000577335 RGPD5Q99666 1765 aa26.69■■□□□ 1.86
SCO1-202ENST00000577335 SMG6Q86US8 1419 aaKnown RBP26.68■■□□□ 1.86
SCO1-202ENST00000577335 TNNT2P45379 298 aaPredicted RBP26.67■■□□□ 1.86
SCO1-202ENST00000577335 HSP90AB2PQ58FF8 381 aa26.67■■□□□ 1.86
SCO1-202ENST00000577335 LTV1Q96GA3 475 aaPredicted RBP26.66■■□□□ 1.86
SCO1-202ENST00000577335 PPM1GO15355 546 aaPredicted RBP26.65■■□□□ 1.86
SCO1-202ENST00000577335 FAM208AQ9UK61 1670 aaKnown RBP26.63■■□□□ 1.85
SCO1-202ENST00000577335 PDE3BQ13370 1112 aa26.63■■□□□ 1.85
SCO1-202ENST00000577335 UPF1Q92900 1129 aaKnown RBP eCLIP26.63■■□□□ 1.85
SCO1-202ENST00000577335 DISP2A7MBM2 1401 aa26.63■■□□□ 1.85
SCO1-202ENST00000577335 PEAK1Q9H792 1746 aa26.62■■□□□ 1.85
SCO1-202ENST00000577335 CC2D1BQ5T0F9 858 aaKnown RBP26.62■■□□□ 1.85
SCO1-202ENST00000577335 DDB1Q16531 1140 aa26.61■■□□□ 1.85
SCO1-202ENST00000577335 CCDC125Q86Z20 511 aa26.61■■□□□ 1.85
SCO1-202ENST00000577335 IL2RBP14784 551 aa26.6■■□□□ 1.85
SCO1-202ENST00000577335 BRWD3Q6RI45 1802 aa26.59■■□□□ 1.85
SCO1-202ENST00000577335 PARP4Q9UKK3 1724 aaKnown RBP26.59■■□□□ 1.85
SCO1-202ENST00000577335 EXOC5O00471 708 aa26.57■■□□□ 1.84
SCO1-202ENST00000577335 NBPF6Q5VWK0 638 aa26.57■■□□□ 1.84
SCO1-202ENST00000577335 NBPF4Q96M43 638 aa26.57■■□□□ 1.84
SCO1-202ENST00000577335 MAP2P11137 1827 aaKnown RBP26.56■■□□□ 1.84
SCO1-202ENST00000577335 FAM196AQ6ZSG2 479 aa26.56■■□□□ 1.84
SCO1-202ENST00000577335 WNK3Q9BYP7 1800 aa26.53■■□□□ 1.84
SCO1-202ENST00000577335 LRRC37A3O60309 1634 aa26.52■■□□□ 1.84
SCO1-202ENST00000577335 EIF4A2Q14240 407 aaKnown RBP26.52■■□□□ 1.84
SCO1-202ENST00000577335 TNS2Q63HR2 1409 aa26.52■■□□□ 1.84
SCO1-202ENST00000577335 MTHFSP49914 203 aa26.51■■□□□ 1.83
SCO1-202ENST00000577335 NCAPD2Q15021 1401 aa26.5■■□□□ 1.83
SCO1-202ENST00000577335 DDX10Q13206 875 aaKnown RBP26.5■■□□□ 1.83
SCO1-202ENST00000577335 RAPGEF4Q8WZA2 1011 aa26.5■■□□□ 1.83
SCO1-202ENST00000577335 OVOS2A0A0G2JMS6 1433 aa26.49■■□□□ 1.83
SCO1-202ENST00000577335 FAM182BQ5T319 152 aa26.49■■□□□ 1.83
SCO1-202ENST00000577335 EYA1Q99502 592 aa26.49■■□□□ 1.83
SCO1-202ENST00000577335 BCL9O00512 1426 aa26.48■■□□□ 1.83
SCO1-202ENST00000577335 TATP17735 454 aaPredicted RBP26.47■■□□□ 1.83
SCO1-202ENST00000577335 SF3B2Q13435 895 aaKnown RBP26.47■■□□□ 1.83
SCO1-202ENST00000577335 USHBP1Q8N6Y0 703 aa26.47■■□□□ 1.83
SCO1-202ENST00000577335 MARCH10Q8NA82 808 aaPredicted RBP26.47■■□□□ 1.83
SCO1-202ENST00000577335 CNGB1Q14028 1251 aaPredicted RBP26.46■■□□□ 1.83
SCO1-202ENST00000577335 PLEKHG2Q9H7P9 1386 aa26.46■■□□□ 1.83
SCO1-202ENST00000577335 IGSF1Q8N6C5 1336 aa26.45■■□□□ 1.83
SCO1-202ENST00000577335 EP400Q96L91 3159 aa26.45■■□□□ 1.82
SCO1-202ENST00000577335 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
SCO1-202ENST00000577335 ZCRB1Q8TBF4 217 aaKnown RBP26.44■■□□□ 1.82
SCO1-202ENST00000577335 MEGF6O75095 1541 aa26.44■■□□□ 1.82
SCO1-202ENST00000577335 IL13P35225 146 aa26.43■■□□□ 1.82
SCO1-202ENST00000577335 RGPD2P0DJD1 1756 aa26.42■■□□□ 1.82
SCO1-202ENST00000577335 PPP2R1AP30153 589 aa26.41■■□□□ 1.82
SCO1-202ENST00000577335 PARD3Q8TEW0 1356 aa26.41■■□□□ 1.82
SCO1-202ENST00000577335 DIAPH1O60610 1272 aaKnown RBP26.4■■□□□ 1.82
SCO1-202ENST00000577335 CFAP53Q96M91 514 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms