RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 MYT1Q01538 1121 aa20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 NFAT5O94916 1531 aa20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 SPATA31A1Q5TZJ5 1347 aa20.53■□□□□ 0.88
TRAPPC1-207ENST00000575639 CAMTA1Q9Y6Y1 1673 aa20.52■□□□□ 0.88
TRAPPC1-207ENST00000575639 AMPHP49418 695 aa20.52■□□□□ 0.88
TRAPPC1-207ENST00000575639 FAM98CQ17RN3 349 aaKnown RBP20.52■□□□□ 0.88
TRAPPC1-207ENST00000575639 SEPT12Q8IYM1 358 aa20.52■□□□□ 0.88
TRAPPC1-207ENST00000575639 USP35Q9P2H5 1018 aa20.52■□□□□ 0.88
TRAPPC1-207ENST00000575639 PLCH1Q4KWH8 1693 aa20.51■□□□□ 0.87
TRAPPC1-207ENST00000575639 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.51■□□□□ 0.87
TRAPPC1-207ENST00000575639 TOM1L2Q6ZVM7 507 aa20.51■□□□□ 0.87
TRAPPC1-207ENST00000575639 IP6K1Q92551 441 aa20.51■□□□□ 0.87
TRAPPC1-207ENST00000575639 MYOM1P52179 1685 aa20.51■□□□□ 0.87
TRAPPC1-207ENST00000575639 TCP11L2Q8N4U5 519 aa20.5■□□□□ 0.87
TRAPPC1-207ENST00000575639 THRAP3Q9Y2W1 955 aaKnown RBP20.5■□□□□ 0.87
TRAPPC1-207ENST00000575639 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
TRAPPC1-207ENST00000575639 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
TRAPPC1-207ENST00000575639 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC1-207ENST00000575639 FBLN1P23142 703 aa20.49■□□□□ 0.87
TRAPPC1-207ENST00000575639 NSD2O96028 1365 aa20.48■□□□□ 0.87
TRAPPC1-207ENST00000575639 RRS1Q15050 365 aaKnown RBP20.48■□□□□ 0.87
TRAPPC1-207ENST00000575639 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
TRAPPC1-207ENST00000575639 CRB1P82279 1406 aa20.47■□□□□ 0.87
TRAPPC1-207ENST00000575639 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
TRAPPC1-207ENST00000575639 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
TRAPPC1-207ENST00000575639 HOXC9P31274 260 aa20.46■□□□□ 0.87
TRAPPC1-207ENST00000575639 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
TRAPPC1-207ENST00000575639 CARD10Q9BWT7 1032 aa20.46■□□□□ 0.87
TRAPPC1-207ENST00000575639 ABCC6O95255 1503 aa20.46■□□□□ 0.87
TRAPPC1-207ENST00000575639 GLI3P10071 1580 aa20.46■□□□□ 0.87
TRAPPC1-207ENST00000575639 LMO7Q8WWI1 1683 aa20.45■□□□□ 0.86
TRAPPC1-207ENST00000575639 NLRP2Q9NX02 1062 aa20.45■□□□□ 0.86
TRAPPC1-207ENST00000575639 ERBB3P21860 1342 aa20.45■□□□□ 0.86
TRAPPC1-207ENST00000575639 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC1-207ENST00000575639 TNNT2P45379 298 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC1-207ENST00000575639 KRT27Q7Z3Y8 459 aa20.44■□□□□ 0.86
TRAPPC1-207ENST00000575639 RTL1A6NKG5 1358 aa20.44■□□□□ 0.86
TRAPPC1-207ENST00000575639 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
TRAPPC1-207ENST00000575639 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-207ENST00000575639 AMER1Q5JTC6 1135 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-207ENST00000575639 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-207ENST00000575639 CDCA7Q9BWT1 371 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC1-207ENST00000575639 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
TRAPPC1-207ENST00000575639 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC1-207ENST00000575639 FLT4P35916 1363 aa20.4■□□□□ 0.86
TRAPPC1-207ENST00000575639 PDE3BQ13370 1112 aa20.4■□□□□ 0.86
TRAPPC1-207ENST00000575639 EMILIN1Q9Y6C2 1016 aa20.4■□□□□ 0.86
TRAPPC1-207ENST00000575639 POLKQ9UBT6 870 aa20.39■□□□□ 0.85
TRAPPC1-207ENST00000575639 COL18A1P39060 1754 aa20.39■□□□□ 0.85
TRAPPC1-207ENST00000575639 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
TRAPPC1-207ENST00000575639 CC2D1BQ5T0F9 858 aaKnown RBP20.38■□□□□ 0.85
TRAPPC1-207ENST00000575639 SMG6Q86US8 1419 aaKnown RBP20.37■□□□□ 0.85
TRAPPC1-207ENST00000575639 INSRP06213 1382 aa20.37■□□□□ 0.85
TRAPPC1-207ENST00000575639 CCDC125Q86Z20 511 aa20.37■□□□□ 0.85
TRAPPC1-207ENST00000575639 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
TRAPPC1-207ENST00000575639 KIF20BQ96Q89 1820 aa20.35■□□□□ 0.85
TRAPPC1-207ENST00000575639 DDB1Q16531 1140 aa20.35■□□□□ 0.85
TRAPPC1-207ENST00000575639 EXOC5O00471 708 aa20.34■□□□□ 0.85
TRAPPC1-207ENST00000575639 IL2RBP14784 551 aa20.33■□□□□ 0.85
TRAPPC1-207ENST00000575639 CNGB1Q14028 1251 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC1-207ENST00000575639 EP400Q96L91 3159 aa20.32■□□□□ 0.84
TRAPPC1-207ENST00000575639 FAM196AQ6ZSG2 479 aa20.32■□□□□ 0.84
TRAPPC1-207ENST00000575639 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
TRAPPC1-207ENST00000575639 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
TRAPPC1-207ENST00000575639 LTN1O94822 1766 aa20.3■□□□□ 0.84
TRAPPC1-207ENST00000575639 SF3B2Q13435 895 aaKnown RBP20.29■□□□□ 0.84
TRAPPC1-207ENST00000575639 FAM182BQ5T319 152 aa20.29■□□□□ 0.84
TRAPPC1-207ENST00000575639 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
TRAPPC1-207ENST00000575639 THSD7AQ9UPZ6 1657 aa20.28■□□□□ 0.84
TRAPPC1-207ENST00000575639 LRP5O75197 1615 aa20.27■□□□□ 0.84
TRAPPC1-207ENST00000575639 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
TRAPPC1-207ENST00000575639 DISP2A7MBM2 1401 aa20.27■□□□□ 0.83
TRAPPC1-207ENST00000575639 MTHFSP49914 203 aa20.26■□□□□ 0.83
TRAPPC1-207ENST00000575639 EIF4A2Q14240 407 aaKnown RBP20.26■□□□□ 0.83
TRAPPC1-207ENST00000575639 USHBP1Q8N6Y0 703 aa20.26■□□□□ 0.83
TRAPPC1-207ENST00000575639 TATP17735 454 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC1-207ENST00000575639 EYA1Q99502 592 aa20.24■□□□□ 0.83
TRAPPC1-207ENST00000575639 MARCH10Q8NA82 808 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC1-207ENST00000575639 RGPD5Q99666 1765 aa20.23■□□□□ 0.83
TRAPPC1-207ENST00000575639 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
TRAPPC1-207ENST00000575639 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
TRAPPC1-207ENST00000575639 ANKRD26Q9UPS8 1709 aa20.22■□□□□ 0.83
TRAPPC1-207ENST00000575639 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
TRAPPC1-207ENST00000575639 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
TRAPPC1-207ENST00000575639 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC1-207ENST00000575639 TRIM37O94972 964 aa20.2■□□□□ 0.82
TRAPPC1-207ENST00000575639 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
TRAPPC1-207ENST00000575639 DEFB132Q7Z7B7 95 aa20.19■□□□□ 0.82
TRAPPC1-207ENST00000575639 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
TRAPPC1-207ENST00000575639 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
TRAPPC1-207ENST00000575639 IL13P35225 146 aa20.18■□□□□ 0.82
TRAPPC1-207ENST00000575639 BAG6P46379 1132 aa20.18■□□□□ 0.82
TRAPPC1-207ENST00000575639 FAM208AQ9UK61 1670 aaKnown RBP20.18■□□□□ 0.82
TRAPPC1-207ENST00000575639 PARP4Q9UKK3 1724 aaKnown RBP20.17■□□□□ 0.82
TRAPPC1-207ENST00000575639 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
TRAPPC1-207ENST00000575639 BRWD3Q6RI45 1802 aa20.17■□□□□ 0.82
TRAPPC1-207ENST00000575639 IGSF1Q8N6C5 1336 aa20.17■□□□□ 0.82
TRAPPC1-207ENST00000575639 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
TRAPPC1-207ENST00000575639 BCL9O00512 1426 aa20.16■□□□□ 0.82
TRAPPC1-207ENST00000575639 APBA3O96018 575 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms