RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
CXCL16-204ENST00000575168 NWD2Q9ULI1 1742 aa16.7■□□□□ 0.26
CXCL16-204ENST00000575168 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
CXCL16-204ENST00000575168 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
CXCL16-204ENST00000575168 INSRP06213 1382 aa16.69■□□□□ 0.26
CXCL16-204ENST00000575168 HOXC9P31274 260 aa16.69■□□□□ 0.26
CXCL16-204ENST00000575168 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
CXCL16-204ENST00000575168 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
CXCL16-204ENST00000575168 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
CXCL16-204ENST00000575168 BTG4Q9NY30 223 aa16.68■□□□□ 0.26
CXCL16-204ENST00000575168 LRP6O75581 1613 aa16.67■□□□□ 0.26
CXCL16-204ENST00000575168 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
CXCL16-204ENST00000575168 CSB-PGBD3P0DP91 1061 aa16.67■□□□□ 0.26
CXCL16-204ENST00000575168 ZNF772Q68DY9 489 aaPredicted RBP16.67■□□□□ 0.26
CXCL16-204ENST00000575168 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
CXCL16-204ENST00000575168 FAM208AQ9UK61 1670 aaKnown RBP16.66■□□□□ 0.26
CXCL16-204ENST00000575168 FBLN1P23142 703 aa16.66■□□□□ 0.26
CXCL16-204ENST00000575168 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
CXCL16-204ENST00000575168 USP21Q9UK80 565 aa16.66■□□□□ 0.26
CXCL16-204ENST00000575168 COL18A1P39060 1754 aa16.66■□□□□ 0.26
CXCL16-204ENST00000575168 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
CXCL16-204ENST00000575168 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
CXCL16-204ENST00000575168 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
CXCL16-204ENST00000575168 ANKRD24Q8TF21 1146 aa16.65■□□□□ 0.26
CXCL16-204ENST00000575168 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
CXCL16-204ENST00000575168 STRN4Q9NRL3 753 aa16.64■□□□□ 0.25
CXCL16-204ENST00000575168 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.64■□□□□ 0.25
CXCL16-204ENST00000575168 SLIT2O94813 1529 aa16.64■□□□□ 0.25
CXCL16-204ENST00000575168 AFF2P51816 1311 aa16.64■□□□□ 0.25
CXCL16-204ENST00000575168 CAMTA1Q9Y6Y1 1673 aa16.63■□□□□ 0.25
CXCL16-204ENST00000575168 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
CXCL16-204ENST00000575168 ERBB3P21860 1342 aa16.63■□□□□ 0.25
CXCL16-204ENST00000575168 WDR17Q8IZU2 1322 aa16.63■□□□□ 0.25
CXCL16-204ENST00000575168 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
CXCL16-204ENST00000575168 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
CXCL16-204ENST00000575168 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
CXCL16-204ENST00000575168 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
CXCL16-204ENST00000575168 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
CXCL16-204ENST00000575168 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
CXCL16-204ENST00000575168 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
CXCL16-204ENST00000575168 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
CXCL16-204ENST00000575168 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
CXCL16-204ENST00000575168 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
CXCL16-204ENST00000575168 AXIN2Q9Y2T1 843 aa16.61■□□□□ 0.25
CXCL16-204ENST00000575168 CRB1P82279 1406 aa16.61■□□□□ 0.25
CXCL16-204ENST00000575168 NEFMP07197 916 aa16.6■□□□□ 0.25
CXCL16-204ENST00000575168 VPS72Q15906 364 aa16.6■□□□□ 0.25
CXCL16-204ENST00000575168 CARD10Q9BWT7 1032 aa16.6■□□□□ 0.25
CXCL16-204ENST00000575168 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
CXCL16-204ENST00000575168 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
CXCL16-204ENST00000575168 THRAP3Q9Y2W1 955 aaKnown RBP16.59■□□□□ 0.25
CXCL16-204ENST00000575168 NRAPQ86VF7 1730 aa16.59■□□□□ 0.25
CXCL16-204ENST00000575168 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
CXCL16-204ENST00000575168 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
CXCL16-204ENST00000575168 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
CXCL16-204ENST00000575168 IL13P35225 146 aa16.57■□□□□ 0.24
CXCL16-204ENST00000575168 QTRT2Q9H974 415 aaKnown RBP16.57■□□□□ 0.24
CXCL16-204ENST00000575168 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
CXCL16-204ENST00000575168 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
CXCL16-204ENST00000575168 SPATA31A5Q5VU36 1347 aa16.55■□□□□ 0.24
CXCL16-204ENST00000575168 SPATA31A7Q8IWB4 1347 aa16.55■□□□□ 0.24
CXCL16-204ENST00000575168 U2AF1L5P0DN76 240 aaPredicted RBP16.55■□□□□ 0.24
CXCL16-204ENST00000575168 U2AF1Q01081 240 aaKnown RBP eCLIP16.55■□□□□ 0.24
CXCL16-204ENST00000575168 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
CXCL16-204ENST00000575168 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
CXCL16-204ENST00000575168 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
CXCL16-204ENST00000575168 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
CXCL16-204ENST00000575168 MIER1Q8N108 512 aa16.54■□□□□ 0.24
CXCL16-204ENST00000575168 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
CXCL16-204ENST00000575168 ATRNO75882 1429 aa16.53■□□□□ 0.24
CXCL16-204ENST00000575168 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
CXCL16-204ENST00000575168 FCHSD2O94868 740 aa16.53■□□□□ 0.24
CXCL16-204ENST00000575168 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
CXCL16-204ENST00000575168 EYA1Q99502 592 aa16.53■□□□□ 0.24
CXCL16-204ENST00000575168 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
CXCL16-204ENST00000575168 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
CXCL16-204ENST00000575168 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
CXCL16-204ENST00000575168 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
CXCL16-204ENST00000575168 BARGINQ6ZT62 677 aa16.52■□□□□ 0.24
CXCL16-204ENST00000575168 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
CXCL16-204ENST00000575168 IL2RBP14784 551 aa16.51■□□□□ 0.23
CXCL16-204ENST00000575168 RXRBP28702 533 aa16.51■□□□□ 0.23
CXCL16-204ENST00000575168 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
CXCL16-204ENST00000575168 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
CXCL16-204ENST00000575168 KDRP35968 1356 aa16.5■□□□□ 0.23
CXCL16-204ENST00000575168 A0A0G2JS52 829 aa16.49■□□□□ 0.23
CXCL16-204ENST00000575168 MYT1Q01538 1121 aa16.49■□□□□ 0.23
CXCL16-204ENST00000575168 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
CXCL16-204ENST00000575168 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
CXCL16-204ENST00000575168 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
CXCL16-204ENST00000575168 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
CXCL16-204ENST00000575168 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
CXCL16-204ENST00000575168 PLEKHO1Q53GL0 409 aaPredicted RBP16.48■□□□□ 0.23
CXCL16-204ENST00000575168 PNISRQ8TF01 805 aaKnown RBP16.48■□□□□ 0.23
CXCL16-204ENST00000575168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
CXCL16-204ENST00000575168 EXOC5O00471 708 aa16.47■□□□□ 0.23
CXCL16-204ENST00000575168 HMOX1P09601 288 aa16.47■□□□□ 0.23
CXCL16-204ENST00000575168 USHBP1Q8N6Y0 703 aa16.47■□□□□ 0.23
CXCL16-204ENST00000575168 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
CXCL16-204ENST00000575168 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms