RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 USP47Q96K76 1375 aa12.75□□□□□ -0.37
NDE1-207ENST00000573203 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
NDE1-207ENST00000573203 CPDO75976 1380 aa12.74□□□□□ -0.37
NDE1-207ENST00000573203 EVA1CP58658 441 aa12.74□□□□□ -0.37
NDE1-207ENST00000573203 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
NDE1-207ENST00000573203 SEPT12Q8IYM1 358 aa12.74□□□□□ -0.37
NDE1-207ENST00000573203 PUS7Q96PZ0 661 aaKnown RBP12.74□□□□□ -0.37
NDE1-207ENST00000573203 TESK2Q96S53 571 aa12.74□□□□□ -0.37
NDE1-207ENST00000573203 SLIT3O75094 1523 aa12.73□□□□□ -0.37
NDE1-207ENST00000573203 ZBTB7CA1YPR0 619 aa12.73□□□□□ -0.37
NDE1-207ENST00000573203 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
NDE1-207ENST00000573203 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
NDE1-207ENST00000573203 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
NDE1-207ENST00000573203 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
NDE1-207ENST00000573203 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
NDE1-207ENST00000573203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.72□□□□□ -0.37
NDE1-207ENST00000573203 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
NDE1-207ENST00000573203 LMO7Q8WWI1 1683 aa12.72□□□□□ -0.37
NDE1-207ENST00000573203 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
NDE1-207ENST00000573203 CAMTA1Q9Y6Y1 1673 aa12.71□□□□□ -0.37
NDE1-207ENST00000573203 TMF1P82094 1093 aa12.71□□□□□ -0.37
NDE1-207ENST00000573203 EP400Q96L91 3159 aa12.71□□□□□ -0.37
NDE1-207ENST00000573203 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
NDE1-207ENST00000573203 SOX12O15370 315 aa12.7□□□□□ -0.38
NDE1-207ENST00000573203 KRT27Q7Z3Y8 459 aa12.7□□□□□ -0.38
NDE1-207ENST00000573203 KCNH5Q8NCM2 988 aa12.7□□□□□ -0.38
NDE1-207ENST00000573203 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
NDE1-207ENST00000573203 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
NDE1-207ENST00000573203 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
NDE1-207ENST00000573203 USP35Q9P2H5 1018 aa12.69□□□□□ -0.38
NDE1-207ENST00000573203 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
NDE1-207ENST00000573203 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
NDE1-207ENST00000573203 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
NDE1-207ENST00000573203 NME9Q86XW9 330 aa12.68□□□□□ -0.38
NDE1-207ENST00000573203 CCDC125Q86Z20 511 aa12.68□□□□□ -0.38
NDE1-207ENST00000573203 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
NDE1-207ENST00000573203 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
NDE1-207ENST00000573203 THSD7AQ9UPZ6 1657 aa12.67□□□□□ -0.38
NDE1-207ENST00000573203 COL5A2P05997 1499 aaPredicted RBP12.67□□□□□ -0.38
NDE1-207ENST00000573203 COL18A1P39060 1754 aa12.67□□□□□ -0.38
NDE1-207ENST00000573203 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
NDE1-207ENST00000573203 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
NDE1-207ENST00000573203 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
NDE1-207ENST00000573203 NFAT5O94916 1531 aa12.66□□□□□ -0.38
NDE1-207ENST00000573203 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
NDE1-207ENST00000573203 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
NDE1-207ENST00000573203 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
NDE1-207ENST00000573203 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
NDE1-207ENST00000573203 CRB1P82279 1406 aa12.64□□□□□ -0.39
NDE1-207ENST00000573203 LTN1O94822 1766 aa12.64□□□□□ -0.39
NDE1-207ENST00000573203 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
NDE1-207ENST00000573203 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
NDE1-207ENST00000573203 AXIN2Q9Y2T1 843 aa12.64□□□□□ -0.39
NDE1-207ENST00000573203 THRAP3Q9Y2W1 955 aaKnown RBP12.64□□□□□ -0.39
NDE1-207ENST00000573203 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
NDE1-207ENST00000573203 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
NDE1-207ENST00000573203 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
NDE1-207ENST00000573203 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
NDE1-207ENST00000573203 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
NDE1-207ENST00000573203 FAM182BQ5T319 152 aa12.62□□□□□ -0.39
NDE1-207ENST00000573203 COG3Q96JB2 828 aa12.62□□□□□ -0.39
NDE1-207ENST00000573203 ABCC6O95255 1503 aa12.62□□□□□ -0.39
NDE1-207ENST00000573203 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
NDE1-207ENST00000573203 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
NDE1-207ENST00000573203 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
NDE1-207ENST00000573203 PARP4Q9UKK3 1724 aaKnown RBP12.61□□□□□ -0.39
NDE1-207ENST00000573203 MYOM1P52179 1685 aa12.61□□□□□ -0.39
NDE1-207ENST00000573203 RGPD1P0DJD0 1748 aa12.6□□□□□ -0.39
NDE1-207ENST00000573203 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
NDE1-207ENST00000573203 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
NDE1-207ENST00000573203 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
NDE1-207ENST00000573203 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
NDE1-207ENST00000573203 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
NDE1-207ENST00000573203 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
NDE1-207ENST00000573203 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
NDE1-207ENST00000573203 BAG6P46379 1132 aa12.58□□□□□ -0.4
NDE1-207ENST00000573203 CARD10Q9BWT7 1032 aa12.58□□□□□ -0.4
NDE1-207ENST00000573203 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.4
NDE1-207ENST00000573203 FYB1O15117 783 aa12.57□□□□□ -0.4
NDE1-207ENST00000573203 PROM2Q8N271 834 aa12.57□□□□□ -0.4
NDE1-207ENST00000573203 ERBB3P21860 1342 aa12.57□□□□□ -0.4
NDE1-207ENST00000573203 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 DDB1Q16531 1140 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 IP6K1Q92551 441 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 CDCA7Q9BWT1 371 aaPredicted RBP12.56□□□□□ -0.4
NDE1-207ENST00000573203 NLRP2Q9NX02 1062 aa12.56□□□□□ -0.4
NDE1-207ENST00000573203 TNS1Q9HBL0 1735 aaKnown RBP12.56□□□□□ -0.4
NDE1-207ENST00000573203 TRIM37O94972 964 aa12.55□□□□□ -0.4
NDE1-207ENST00000573203 FBLN1P23142 703 aa12.55□□□□□ -0.4
NDE1-207ENST00000573203 AMPHP49418 695 aa12.55□□□□□ -0.4
NDE1-207ENST00000573203 CARD14Q9BXL6 1004 aa12.55□□□□□ -0.4
NDE1-207ENST00000573203 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
NDE1-207ENST00000573203 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
NDE1-207ENST00000573203 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
NDE1-207ENST00000573203 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
NDE1-207ENST00000573203 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
NDE1-207ENST00000573203 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms