RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 POLR3EQ9NVU0 708 aa7.58□□□□□ -1.2
TVP23B-205ENST00000572845 DNMT3LQ9UJW3 386 aa7.58□□□□□ -1.2
TVP23B-205ENST00000572845 CTDSPL2Q05D32 466 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 SKIV2LQ15477 1246 aaKnown RBP7.57□□□□□ -1.2
TVP23B-205ENST00000572845 PPP1R26Q5T8A7 1209 aaPredicted RBP7.57□□□□□ -1.2
TVP23B-205ENST00000572845 Q6ZVU0 165 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 ZBTB33Q86T24 672 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 PNMA1Q8ND90 353 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 SLC10A4Q96EP9 437 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 CARD14Q9BXL6 1004 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 FKBPLQ9UIM3 349 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
TVP23B-205ENST00000572845 PTK2Q05397 1052 aa7.56□□□□□ -1.2
TVP23B-205ENST00000572845 SPINT1O43278 529 aa7.55□□□□□ -1.2
TVP23B-205ENST00000572845 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
TVP23B-205ENST00000572845 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
TVP23B-205ENST00000572845 PTSQ03393 145 aa7.53□□□□□ -1.2
TVP23B-205ENST00000572845 KCNMA1Q12791 1236 aa7.53□□□□□ -1.2
TVP23B-205ENST00000572845 PPP2R2DQ66LE6 453 aa7.53□□□□□ -1.2
TVP23B-205ENST00000572845 DDRGK1Q96HY6 314 aa7.53□□□□□ -1.2
TVP23B-205ENST00000572845 ATP1B4Q9UN42 357 aaPredicted RBP7.53□□□□□ -1.2
TVP23B-205ENST00000572845 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
TVP23B-205ENST00000572845 SH3D19Q5HYK7 790 aa7.52□□□□□ -1.21
TVP23B-205ENST00000572845 RNF225M0QZC1 329 aaPredicted RBP7.51□□□□□ -1.21
TVP23B-205ENST00000572845 CBLBQ13191 982 aa7.51□□□□□ -1.21
TVP23B-205ENST00000572845 LRRN4Q8WUT4 740 aa7.51□□□□□ -1.21
TVP23B-205ENST00000572845 FIGNL2A6NMB9 653 aa7.5□□□□□ -1.21
TVP23B-205ENST00000572845 CCDC155Q8N6L0 562 aa7.5□□□□□ -1.21
TVP23B-205ENST00000572845 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.5□□□□□ -1.21
TVP23B-205ENST00000572845 SLC35F4A4IF30 521 aa7.49□□□□□ -1.21
TVP23B-205ENST00000572845 NR6A1Q15406 480 aa7.49□□□□□ -1.21
TVP23B-205ENST00000572845 INTS6LQ5JSJ4 861 aaKnown RBP7.49□□□□□ -1.21
TVP23B-205ENST00000572845 CNTNAP3BQ96NU0 1288 aa7.49□□□□□ -1.21
TVP23B-205ENST00000572845 CNTNAP3Q9BZ76 1288 aa7.49□□□□□ -1.21
TVP23B-205ENST00000572845 ADAM32Q8TC27 787 aa7.48□□□□□ -1.21
TVP23B-205ENST00000572845 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
TVP23B-205ENST00000572845 GPR161Q8N6U8 529 aaKnown RBP7.47□□□□□ -1.21
TVP23B-205ENST00000572845 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
TVP23B-205ENST00000572845 AP1G2O75843 785 aa7.46□□□□□ -1.22
TVP23B-205ENST00000572845 ITGA6P23229 1130 aa7.46□□□□□ -1.22
TVP23B-205ENST00000572845 RELBQ01201 579 aa7.46□□□□□ -1.22
TVP23B-205ENST00000572845 DZIP3Q86Y13 1208 aaKnown RBP7.46□□□□□ -1.22
TVP23B-205ENST00000572845 TMEM151AQ8N4L1 468 aa7.46□□□□□ -1.22
TVP23B-205ENST00000572845 KDM4CQ9H3R0 1056 aa7.46□□□□□ -1.22
TVP23B-205ENST00000572845 POLMQ9NP87 494 aaPredicted RBP7.46□□□□□ -1.22
TVP23B-205ENST00000572845 ADAMTS8Q9UP79 889 aa7.46□□□□□ -1.22
TVP23B-205ENST00000572845 KRT76Q01546 638 aa7.45□□□□□ -1.22
TVP23B-205ENST00000572845 CCDC125Q86Z20 511 aa7.45□□□□□ -1.22
TVP23B-205ENST00000572845 SEPT12Q8IYM1 358 aa7.45□□□□□ -1.22
TVP23B-205ENST00000572845 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
TVP23B-205ENST00000572845 PROCA1Q8NCQ7 364 aaPredicted RBP7.45□□□□□ -1.22
TVP23B-205ENST00000572845 INSM2Q96T92 566 aaPredicted RBP7.45□□□□□ -1.22
TVP23B-205ENST00000572845 CTSOP43234 321 aaPredicted RBP7.44□□□□□ -1.22
TVP23B-205ENST00000572845 AGBL1Q96MI9 1066 aa7.44□□□□□ -1.22
TVP23B-205ENST00000572845 GDF11O95390 407 aa7.43□□□□□ -1.22
TVP23B-205ENST00000572845 ADH1AP07327 375 aa7.43□□□□□ -1.22
TVP23B-205ENST00000572845 SLURP2P0DP57 97 aa7.43□□□□□ -1.22
TVP23B-205ENST00000572845 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
TVP23B-205ENST00000572845 OCSTAMPQ9BR26 566 aa7.43□□□□□ -1.22
TVP23B-205ENST00000572845 FAM117AQ9C073 453 aa7.43□□□□□ -1.22
TVP23B-205ENST00000572845 CDC14CA4D256 554 aa7.42□□□□□ -1.22
TVP23B-205ENST00000572845 PTGIRP43119 386 aa7.42□□□□□ -1.22
TVP23B-205ENST00000572845 RASSF7Q02833 373 aa7.42□□□□□ -1.22
TVP23B-205ENST00000572845 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
TVP23B-205ENST00000572845 GMCL1Q96IK5 515 aa7.42□□□□□ -1.22
TVP23B-205ENST00000572845 ESPNB1AK53 854 aa7.41□□□□□ -1.22
TVP23B-205ENST00000572845 ERVH48-1M5A8F1 160 aa7.41□□□□□ -1.22
TVP23B-205ENST00000572845 USP17L8P0C7I0 530 aa7.41□□□□□ -1.22
TVP23B-205ENST00000572845 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
TVP23B-205ENST00000572845 ZNF385CQ66K41 422 aaPredicted RBP7.41□□□□□ -1.22
TVP23B-205ENST00000572845 LYSMD3Q7Z3D4 306 aa7.41□□□□□ -1.22
TVP23B-205ENST00000572845 ZNF784Q8NCA9 323 aaPredicted RBP7.41□□□□□ -1.22
TVP23B-205ENST00000572845 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
TVP23B-205ENST00000572845 LILRA1O75019 489 aa7.4□□□□□ -1.22
TVP23B-205ENST00000572845 GSK3AP49840 483 aa7.4□□□□□ -1.22
TVP23B-205ENST00000572845 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
TVP23B-205ENST00000572845 ZNF592Q92610 1267 aa7.4□□□□□ -1.22
TVP23B-205ENST00000572845 GOPCQ9HD26 462 aa7.4□□□□□ -1.22
TVP23B-205ENST00000572845 TMPRSS4Q9NRS4 437 aa7.4□□□□□ -1.22
TVP23B-205ENST00000572845 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
TVP23B-205ENST00000572845 MCCD1P59942 119 aaPredicted RBP7.39□□□□□ -1.23
TVP23B-205ENST00000572845 RNFT1Q5M7Z0 435 aa7.39□□□□□ -1.23
TVP23B-205ENST00000572845 SCARF2Q96GP6 870 aaPredicted RBP7.39□□□□□ -1.23
TVP23B-205ENST00000572845 GPBP1L1Q9HC44 474 aaPredicted RBP7.39□□□□□ -1.23
TVP23B-205ENST00000572845 ADD1P35611 737 aaKnown RBP7.38□□□□□ -1.23
TVP23B-205ENST00000572845 RFC5P40937 340 aa7.38□□□□□ -1.23
TVP23B-205ENST00000572845 RNF144AP50876 292 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-205ENST00000572845 RAB15P59190 212 aa7.38□□□□□ -1.23
TVP23B-205ENST00000572845 SRSF11Q05519 484 aaKnown RBP7.38□□□□□ -1.23
TVP23B-205ENST00000572845 FBXO31Q5XUX0 539 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-205ENST00000572845 KANK3Q6NY19 840 aa7.38□□□□□ -1.23
TVP23B-205ENST00000572845 FOXR1Q6PIV2 292 aa7.38□□□□□ -1.23
TVP23B-205ENST00000572845 EPS8L1Q8TE68 723 aa7.38□□□□□ -1.23
TVP23B-205ENST00000572845 ENAMQ9NRM1 1142 aa7.38□□□□□ -1.23
TVP23B-205ENST00000572845 SENP3-EIF4A1A0A087X0R7 540 aa7.37□□□□□ -1.23
TVP23B-205ENST00000572845 ARHGEF15O94989 841 aa7.37□□□□□ -1.23
TVP23B-205ENST00000572845 IGHA1P01876 353 aa7.37□□□□□ -1.23
TVP23B-205ENST00000572845 GPC1P35052 558 aa7.37□□□□□ -1.23
TVP23B-205ENST00000572845 MAP3K10Q02779 954 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms