RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 SPATA31A5Q5VU36 1347 aa22.24■■□□□ 1.15
LITAF-210ENST00000571976 SPATA31A7Q8IWB4 1347 aa22.24■■□□□ 1.15
LITAF-210ENST00000571976 RGS12O14924 1447 aa22.23■■□□□ 1.15
LITAF-210ENST00000571976 COL5A2P05997 1499 aaPredicted RBP22.23■■□□□ 1.15
LITAF-210ENST00000571976 SOCS7O14512 581 aa22.23■■□□□ 1.15
LITAF-210ENST00000571976 ABCC6O95255 1503 aa22.22■■□□□ 1.15
LITAF-210ENST00000571976 ONECUT3O60422 494 aaPredicted RBP22.22■■□□□ 1.15
LITAF-210ENST00000571976 LARP1Q6PKG0 1096 aaKnown RBP22.22■■□□□ 1.15
LITAF-210ENST00000571976 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
LITAF-210ENST00000571976 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
LITAF-210ENST00000571976 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
LITAF-210ENST00000571976 LTN1O94822 1766 aa22.19■■□□□ 1.14
LITAF-210ENST00000571976 FBLN1P23142 703 aa22.18■■□□□ 1.14
LITAF-210ENST00000571976 FAM98CQ17RN3 349 aaKnown RBP22.18■■□□□ 1.14
LITAF-210ENST00000571976 IP6K1Q92551 441 aa22.18■■□□□ 1.14
LITAF-210ENST00000571976 CRB1P82279 1406 aa22.17■■□□□ 1.14
LITAF-210ENST00000571976 NSD2O96028 1365 aa22.17■■□□□ 1.14
LITAF-210ENST00000571976 WDR17Q8IZU2 1322 aa22.17■■□□□ 1.14
LITAF-210ENST00000571976 AMPHP49418 695 aa22.17■■□□□ 1.14
LITAF-210ENST00000571976 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
LITAF-210ENST00000571976 CSB-PGBD3P0DP91 1061 aa22.16■■□□□ 1.14
LITAF-210ENST00000571976 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
LITAF-210ENST00000571976 SEPT12Q8IYM1 358 aa22.16■■□□□ 1.14
LITAF-210ENST00000571976 THRAP3Q9Y2W1 955 aaKnown RBP22.16■■□□□ 1.14
LITAF-210ENST00000571976 BLMP54132 1417 aaPredicted RBP22.15■■□□□ 1.14
LITAF-210ENST00000571976 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
LITAF-210ENST00000571976 PER1O15534 1290 aaPredicted RBP22.15■■□□□ 1.14
LITAF-210ENST00000571976 RRS1Q15050 365 aaKnown RBP22.15■■□□□ 1.14
LITAF-210ENST00000571976 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
LITAF-210ENST00000571976 A0A0G2JS52 829 aa22.14■■□□□ 1.13
LITAF-210ENST00000571976 HOXC9P31274 260 aa22.14■■□□□ 1.13
LITAF-210ENST00000571976 MYT1Q01538 1121 aa22.14■■□□□ 1.13
LITAF-210ENST00000571976 BARGINQ6ZT62 677 aa22.14■■□□□ 1.13
LITAF-210ENST00000571976 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
LITAF-210ENST00000571976 ERBB3P21860 1342 aa22.13■■□□□ 1.13
LITAF-210ENST00000571976 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
LITAF-210ENST00000571976 ANKRD26Q9UPS8 1709 aa22.12■■□□□ 1.13
LITAF-210ENST00000571976 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
LITAF-210ENST00000571976 ANKRD24Q8TF21 1146 aa22.12■■□□□ 1.13
LITAF-210ENST00000571976 CARD10Q9BWT7 1032 aa22.12■■□□□ 1.13
LITAF-210ENST00000571976 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
LITAF-210ENST00000571976 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
LITAF-210ENST00000571976 NLRP2Q9NX02 1062 aa22.08■■□□□ 1.13
LITAF-210ENST00000571976 FLT4P35916 1363 aa22.08■■□□□ 1.12
LITAF-210ENST00000571976 THSD7AQ9UPZ6 1657 aa22.07■■□□□ 1.12
LITAF-210ENST00000571976 KRT27Q7Z3Y8 459 aa22.07■■□□□ 1.12
LITAF-210ENST00000571976 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
LITAF-210ENST00000571976 POLKQ9UBT6 870 aa22.07■■□□□ 1.12
LITAF-210ENST00000571976 EMILIN1Q9Y6C2 1016 aa22.07■■□□□ 1.12
LITAF-210ENST00000571976 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
LITAF-210ENST00000571976 INSRP06213 1382 aa22.06■■□□□ 1.12
LITAF-210ENST00000571976 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
LITAF-210ENST00000571976 NPC1L1Q9UHC9 1359 aa22.05■■□□□ 1.12
LITAF-210ENST00000571976 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
LITAF-210ENST00000571976 CDCA7Q9BWT1 371 aaPredicted RBP22.05■■□□□ 1.12
LITAF-210ENST00000571976 MAP2P11137 1827 aaKnown RBP22.04■■□□□ 1.12
LITAF-210ENST00000571976 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
LITAF-210ENST00000571976 CC2D1BQ5T0F9 858 aaKnown RBP22.03■■□□□ 1.12
LITAF-210ENST00000571976 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
LITAF-210ENST00000571976 FAM208AQ9UK61 1670 aaKnown RBP22.02■■□□□ 1.12
LITAF-210ENST00000571976 UPF1Q92900 1129 aaKnown RBP eCLIP22.02■■□□□ 1.12
LITAF-210ENST00000571976 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
LITAF-210ENST00000571976 PARP4Q9UKK3 1724 aaKnown RBP22■■□□□ 1.11
LITAF-210ENST00000571976 DISP2A7MBM2 1401 aa21.99■■□□□ 1.11
LITAF-210ENST00000571976 DDB1Q16531 1140 aa21.99■■□□□ 1.11
LITAF-210ENST00000571976 IL2RBP14784 551 aa21.98■■□□□ 1.11
LITAF-210ENST00000571976 WNK3Q9BYP7 1800 aa21.97■■□□□ 1.11
LITAF-210ENST00000571976 NBPF6Q5VWK0 638 aa21.97■■□□□ 1.11
LITAF-210ENST00000571976 NBPF4Q96M43 638 aa21.97■■□□□ 1.11
LITAF-210ENST00000571976 EP400Q96L91 3159 aa21.96■■□□□ 1.11
LITAF-210ENST00000571976 EXOC5O00471 708 aa21.96■■□□□ 1.11
LITAF-210ENST00000571976 CNGB1Q14028 1251 aaPredicted RBP21.96■■□□□ 1.11
LITAF-210ENST00000571976 CCDC125Q86Z20 511 aa21.95■■□□□ 1.1
LITAF-210ENST00000571976 FAM182BQ5T319 152 aa21.94■■□□□ 1.1
LITAF-210ENST00000571976 LRRC37A3O60309 1634 aa21.94■■□□□ 1.1
LITAF-210ENST00000571976 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
LITAF-210ENST00000571976 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
LITAF-210ENST00000571976 FAM196AQ6ZSG2 479 aa21.93■■□□□ 1.1
LITAF-210ENST00000571976 MTHFSP49914 203 aa21.92■■□□□ 1.1
LITAF-210ENST00000571976 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
LITAF-210ENST00000571976 USHBP1Q8N6Y0 703 aa21.91■■□□□ 1.1
LITAF-210ENST00000571976 TNS2Q63HR2 1409 aa21.9■■□□□ 1.1
LITAF-210ENST00000571976 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
LITAF-210ENST00000571976 EYA1Q99502 592 aa21.9■■□□□ 1.1
LITAF-210ENST00000571976 MARCH10Q8NA82 808 aaPredicted RBP21.88■■□□□ 1.09
LITAF-210ENST00000571976 OVOS2A0A0G2JMS6 1433 aa21.88■■□□□ 1.09
LITAF-210ENST00000571976 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
LITAF-210ENST00000571976 SF3B2Q13435 895 aaKnown RBP21.87■■□□□ 1.09
LITAF-210ENST00000571976 NCAPD2Q15021 1401 aa21.87■■□□□ 1.09
LITAF-210ENST00000571976 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
LITAF-210ENST00000571976 MEGF6O75095 1541 aa21.85■■□□□ 1.09
LITAF-210ENST00000571976 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
LITAF-210ENST00000571976 IGSF1Q8N6C5 1336 aa21.84■■□□□ 1.09
LITAF-210ENST00000571976 BCL9O00512 1426 aa21.84■■□□□ 1.09
LITAF-210ENST00000571976 IL13P35225 146 aa21.84■■□□□ 1.09
LITAF-210ENST00000571976 TRIM37O94972 964 aa21.83■■□□□ 1.09
LITAF-210ENST00000571976 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
LITAF-210ENST00000571976 DDX54Q8TDD1 881 aaKnown RBP21.82■■□□□ 1.08
LITAF-210ENST00000571976 DIAPH1O60610 1272 aaKnown RBP21.81■■□□□ 1.08
LITAF-210ENST00000571976 PARD3Q8TEW0 1356 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms