RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NUTM2FA1L443 756 aa8.46□□□□□ -1.06
SMG1-217ENST00000569764 ABTB2Q8N961 1025 aa8.46□□□□□ -1.06
SMG1-217ENST00000569764 STRN4Q9NRL3 753 aa8.46□□□□□ -1.06
SMG1-217ENST00000569764 PPRC1Q5VV67 1664 aaKnown RBP8.45□□□□□ -1.06
SMG1-217ENST00000569764 C16orf71Q8IYS4 520 aaPredicted RBP8.45□□□□□ -1.06
SMG1-217ENST00000569764 COG3Q96JB2 828 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 ZNF662Q6ZS27 426 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 ST20-MTHFSA0A0A6YYL1 179 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 EXOC5O00471 708 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 TRAK1Q9UPV9 953 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 RICTORQ6R327 1708 aa8.45□□□□□ -1.06
SMG1-217ENST00000569764 NLRP6P59044 892 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 MPNDQ8N594 471 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 SIRT1Q96EB6 747 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 PRDM15P57071 1507 aaPredicted RBP8.44□□□□□ -1.06
SMG1-217ENST00000569764 HSP90AB1P08238 724 aaKnown RBP8.44□□□□□ -1.06
SMG1-217ENST00000569764 MROH2AA6NES4 1674 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 TET3O43151 1660 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 FLAD1Q8NFF5 587 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 CCDC61Q9Y6R9 512 aa8.44□□□□□ -1.06
SMG1-217ENST00000569764 SMG6Q86US8 1419 aaKnown RBP8.44□□□□□ -1.06
SMG1-217ENST00000569764 UNCXA6NJT0 531 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 FOXO3O43524 673 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 VTI1AQ96AJ9 217 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 CAMSAP1Q5T5Y3 1602 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 CARNS1A5YM72 827 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 FAM135BQ49AJ0 1406 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
SMG1-217ENST00000569764 PNMA2Q9UL42 364 aa8.43□□□□□ -1.06
SMG1-217ENST00000569764 MINK1Q8N4C8 1332 aaPredicted RBP8.43□□□□□ -1.06
SMG1-217ENST00000569764 TRPM2O94759 1503 aa8.42□□□□□ -1.06
SMG1-217ENST00000569764 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
SMG1-217ENST00000569764 KIF4AO95239 1232 aa8.42□□□□□ -1.06
SMG1-217ENST00000569764 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
SMG1-217ENST00000569764 MADDQ8WXG6 1647 aa8.42□□□□□ -1.06
SMG1-217ENST00000569764 CENPJQ9HC77 1338 aaPredicted RBP8.42□□□□□ -1.06
SMG1-217ENST00000569764 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
SMG1-217ENST00000569764 AFF2P51816 1311 aa8.42□□□□□ -1.06
SMG1-217ENST00000569764 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
SMG1-217ENST00000569764 EIF2AK4Q9P2K8 1649 aaKnown RBP8.42□□□□□ -1.06
SMG1-217ENST00000569764 RALBP1Q15311 655 aa8.42□□□□□ -1.06
SMG1-217ENST00000569764 SMARCC1Q92922 1105 aaPredicted RBP8.42□□□□□ -1.06
SMG1-217ENST00000569764 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 ANP32CO43423 234 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 CREBRFQ8IUR6 639 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 KNSTRNQ9Y448 316 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 REREQ9P2R6 1566 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 RAB11FIP3O75154 756 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 MYCNP04198 464 aaPredicted RBP8.41□□□□□ -1.06
SMG1-217ENST00000569764 TATP17735 454 aaPredicted RBP8.41□□□□□ -1.06
SMG1-217ENST00000569764 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
SMG1-217ENST00000569764 DIP2CQ9Y2E4 1556 aa8.41□□□□□ -1.06
SMG1-217ENST00000569764 KRT27Q7Z3Y8 459 aa8.4□□□□□ -1.06
SMG1-217ENST00000569764 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.06
SMG1-217ENST00000569764 C1orf141Q5JVX7 400 aa8.4□□□□□ -1.06
SMG1-217ENST00000569764 SPATA32Q96LK8 384 aa8.4□□□□□ -1.06
SMG1-217ENST00000569764 TESK2Q96S53 571 aa8.4□□□□□ -1.06
SMG1-217ENST00000569764 PRKRIP1Q9H875 184 aaPredicted RBP8.4□□□□□ -1.06
SMG1-217ENST00000569764 ERVK-7P63135 1459 aa8.4□□□□□ -1.07
SMG1-217ENST00000569764 SENP3-EIF4A1A0A087X0R7 540 aa8.4□□□□□ -1.07
SMG1-217ENST00000569764 MAP4K4O95819 1239 aaPredicted RBP8.4□□□□□ -1.07
SMG1-217ENST00000569764 NKTRP30414 1462 aaKnown RBP8.39□□□□□ -1.07
SMG1-217ENST00000569764 RINLQ6ZS11 566 aa8.39□□□□□ -1.07
SMG1-217ENST00000569764 KIF13AQ9H1H9 1805 aa8.39□□□□□ -1.07
SMG1-217ENST00000569764 IFT172Q9UG01 1749 aa8.39□□□□□ -1.07
SMG1-217ENST00000569764 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
SMG1-217ENST00000569764 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 IRX3P78415 501 aaPredicted RBP8.38□□□□□ -1.07
SMG1-217ENST00000569764 DDB1Q16531 1140 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 UNC5CLQ8IV45 518 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 SYTL4Q96C24 671 aaPredicted RBP8.38□□□□□ -1.07
SMG1-217ENST00000569764 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
SMG1-217ENST00000569764 ABCC3O15438 1527 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 SH3BP5O60239 455 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 SPON1Q9HCB6 807 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 SPG7Q9UQ90 795 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 ADGRF5Q8IZF2 1346 aa8.38□□□□□ -1.07
SMG1-217ENST00000569764 PAX3P23760 479 aa8.37□□□□□ -1.07
SMG1-217ENST00000569764 RTF1Q92541 710 aaKnown RBP8.37□□□□□ -1.07
SMG1-217ENST00000569764 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
SMG1-217ENST00000569764 IQGAP1P46940 1657 aa8.37□□□□□ -1.07
SMG1-217ENST00000569764 MYO5BQ9ULV0 1848 aa8.37□□□□□ -1.07
SMG1-217ENST00000569764 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
SMG1-217ENST00000569764 PREX1Q8TCU6 1659 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 KLHL42Q9P2K6 505 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 G3V3G9 751 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 SYNMO15061 1565 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 DCAF8Q5TAQ9 597 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 SUGT1Q9Y2Z0 365 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 KIF1BO60333 1816 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 LMTK2Q8IWU2 1503 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 LAMC1P11047 1609 aa8.36□□□□□ -1.07
SMG1-217ENST00000569764 DCCP43146 1447 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms