RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 SOCS7O14512 581 aa17.22■□□□□ 0.35
NSMCE1-214ENST00000569236 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
NSMCE1-214ENST00000569236 COL5A2P05997 1499 aaPredicted RBP17.21■□□□□ 0.35
NSMCE1-214ENST00000569236 ABCC6O95255 1503 aa17.21■□□□□ 0.34
NSMCE1-214ENST00000569236 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
NSMCE1-214ENST00000569236 SPATA31A5Q5VU36 1347 aa17.2■□□□□ 0.34
NSMCE1-214ENST00000569236 SPATA31A7Q8IWB4 1347 aa17.2■□□□□ 0.34
NSMCE1-214ENST00000569236 MIER1Q8N108 512 aa17.2■□□□□ 0.34
NSMCE1-214ENST00000569236 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
NSMCE1-214ENST00000569236 RGPD5Q99666 1765 aa17.19■□□□□ 0.34
NSMCE1-214ENST00000569236 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
NSMCE1-214ENST00000569236 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
NSMCE1-214ENST00000569236 SPATA31A1Q5TZJ5 1347 aa17.18■□□□□ 0.34
NSMCE1-214ENST00000569236 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
NSMCE1-214ENST00000569236 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
NSMCE1-214ENST00000569236 A0A0G2JS52 829 aa17.16■□□□□ 0.34
NSMCE1-214ENST00000569236 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
NSMCE1-214ENST00000569236 MYT1Q01538 1121 aa17.16■□□□□ 0.34
NSMCE1-214ENST00000569236 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
NSMCE1-214ENST00000569236 CRB1P82279 1406 aa17.16■□□□□ 0.34
NSMCE1-214ENST00000569236 ANKRD26Q9UPS8 1709 aa17.16■□□□□ 0.34
NSMCE1-214ENST00000569236 FBLN1P23142 703 aa17.15■□□□□ 0.34
NSMCE1-214ENST00000569236 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
NSMCE1-214ENST00000569236 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
NSMCE1-214ENST00000569236 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
NSMCE1-214ENST00000569236 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
NSMCE1-214ENST00000569236 TOM1L2Q6ZVM7 507 aa17.15■□□□□ 0.34
NSMCE1-214ENST00000569236 NSD2O96028 1365 aa17.14■□□□□ 0.33
NSMCE1-214ENST00000569236 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
NSMCE1-214ENST00000569236 AMPHP49418 695 aa17.13■□□□□ 0.33
NSMCE1-214ENST00000569236 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
NSMCE1-214ENST00000569236 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
NSMCE1-214ENST00000569236 IP6K1Q92551 441 aa17.13■□□□□ 0.33
NSMCE1-214ENST00000569236 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
NSMCE1-214ENST00000569236 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
NSMCE1-214ENST00000569236 ERBB3P21860 1342 aa17.12■□□□□ 0.33
NSMCE1-214ENST00000569236 RTL1A6NKG5 1358 aa17.12■□□□□ 0.33
NSMCE1-214ENST00000569236 BARGINQ6ZT62 677 aa17.12■□□□□ 0.33
NSMCE1-214ENST00000569236 THSD7AQ9UPZ6 1657 aa17.11■□□□□ 0.33
NSMCE1-214ENST00000569236 HOXC9P31274 260 aa17.11■□□□□ 0.33
NSMCE1-214ENST00000569236 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
NSMCE1-214ENST00000569236 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
NSMCE1-214ENST00000569236 PER1O15534 1290 aaPredicted RBP17.09■□□□□ 0.33
NSMCE1-214ENST00000569236 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
NSMCE1-214ENST00000569236 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
NSMCE1-214ENST00000569236 FLT4P35916 1363 aa17.08■□□□□ 0.33
NSMCE1-214ENST00000569236 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.33
NSMCE1-214ENST00000569236 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.33
NSMCE1-214ENST00000569236 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.33
NSMCE1-214ENST00000569236 MORC1Q86VD1 984 aa17.08■□□□□ 0.33
NSMCE1-214ENST00000569236 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.33
NSMCE1-214ENST00000569236 EP400Q96L91 3159 aa17.08■□□□□ 0.32
NSMCE1-214ENST00000569236 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
NSMCE1-214ENST00000569236 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
NSMCE1-214ENST00000569236 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
NSMCE1-214ENST00000569236 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
NSMCE1-214ENST00000569236 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
NSMCE1-214ENST00000569236 WNK3Q9BYP7 1800 aa17.06■□□□□ 0.32
NSMCE1-214ENST00000569236 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
NSMCE1-214ENST00000569236 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
NSMCE1-214ENST00000569236 INSRP06213 1382 aa17.05■□□□□ 0.32
NSMCE1-214ENST00000569236 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
NSMCE1-214ENST00000569236 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
NSMCE1-214ENST00000569236 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
NSMCE1-214ENST00000569236 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
NSMCE1-214ENST00000569236 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
NSMCE1-214ENST00000569236 CENPBP07199 599 aaPredicted RBP17.03■□□□□ 0.32
NSMCE1-214ENST00000569236 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
NSMCE1-214ENST00000569236 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
NSMCE1-214ENST00000569236 LRRC37A3O60309 1634 aa17.02■□□□□ 0.32
NSMCE1-214ENST00000569236 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
NSMCE1-214ENST00000569236 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
NSMCE1-214ENST00000569236 DISP2A7MBM2 1401 aa17.01■□□□□ 0.31
NSMCE1-214ENST00000569236 DDB1Q16531 1140 aa17.01■□□□□ 0.31
NSMCE1-214ENST00000569236 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
NSMCE1-214ENST00000569236 FAM182BQ5T319 152 aa17■□□□□ 0.31
NSMCE1-214ENST00000569236 IL2RBP14784 551 aa17■□□□□ 0.31
NSMCE1-214ENST00000569236 NBPF6Q5VWK0 638 aa16.99■□□□□ 0.31
NSMCE1-214ENST00000569236 NBPF4Q96M43 638 aa16.99■□□□□ 0.31
NSMCE1-214ENST00000569236 EXOC5O00471 708 aa16.97■□□□□ 0.31
NSMCE1-214ENST00000569236 FAM196AQ6ZSG2 479 aa16.97■□□□□ 0.31
NSMCE1-214ENST00000569236 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
NSMCE1-214ENST00000569236 TNS2Q63HR2 1409 aa16.96■□□□□ 0.31
NSMCE1-214ENST00000569236 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
NSMCE1-214ENST00000569236 OVOS2A0A0G2JMS6 1433 aa16.95■□□□□ 0.3
NSMCE1-214ENST00000569236 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
NSMCE1-214ENST00000569236 MTHFSP49914 203 aa16.93■□□□□ 0.3
NSMCE1-214ENST00000569236 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
NSMCE1-214ENST00000569236 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
NSMCE1-214ENST00000569236 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
NSMCE1-214ENST00000569236 MEGF6O75095 1541 aa16.92■□□□□ 0.3
NSMCE1-214ENST00000569236 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
NSMCE1-214ENST00000569236 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
NSMCE1-214ENST00000569236 EYA1Q99502 592 aa16.92■□□□□ 0.3
NSMCE1-214ENST00000569236 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
NSMCE1-214ENST00000569236 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
NSMCE1-214ENST00000569236 TRIM37O94972 964 aa16.89■□□□□ 0.3
NSMCE1-214ENST00000569236 ZCRB1Q8TBF4 217 aaKnown RBP16.89■□□□□ 0.29
NSMCE1-214ENST00000569236 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
NSMCE1-214ENST00000569236 BCL9O00512 1426 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms