RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
CYLD-213ENST00000568744 MRGPRX2Q96LB1 330 aa10.93□□□□□ -0.66
CYLD-213ENST00000568744 KCTD15Q96SI1 283 aaPredicted RBP10.93□□□□□ -0.66
CYLD-213ENST00000568744 CDV3Q9UKY7 258 aaKnown RBP10.93□□□□□ -0.66
CYLD-213ENST00000568744 CDCA8Q53HL2 280 aa10.92□□□□□ -0.66
CYLD-213ENST00000568744 CFAP70Q5T0N1 1121 aa10.92□□□□□ -0.66
CYLD-213ENST00000568744 HOMEZQ8IX15 550 aa10.92□□□□□ -0.66
CYLD-213ENST00000568744 DEPDC4Q8N2C3 294 aa10.92□□□□□ -0.66
CYLD-213ENST00000568744 WNT7AO00755 349 aa10.91□□□□□ -0.66
CYLD-213ENST00000568744 RNF20Q5VTR2 975 aa10.91□□□□□ -0.66
CYLD-213ENST00000568744 ARXQ96QS3 562 aa10.91□□□□□ -0.66
CYLD-213ENST00000568744 MAFBQ9Y5Q3 323 aaPredicted RBP10.91□□□□□ -0.66
CYLD-213ENST00000568744 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.9□□□□□ -0.66
CYLD-213ENST00000568744 USP17L5A8MUK1 530 aa10.9□□□□□ -0.66
CYLD-213ENST00000568744 PLPP7Q8NBV4 271 aa10.9□□□□□ -0.66
CYLD-213ENST00000568744 NFATC2IPQ8NCF5 419 aa10.9□□□□□ -0.66
CYLD-213ENST00000568744 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
CYLD-213ENST00000568744 USP17L3A6NCW0 530 aa10.89□□□□□ -0.67
CYLD-213ENST00000568744 USP17L4A6NCW7 530 aa10.89□□□□□ -0.67
CYLD-213ENST00000568744 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
CYLD-213ENST00000568744 USP17L1Q7RTZ2 530 aa10.89□□□□□ -0.67
CYLD-213ENST00000568744 PHTF2Q8N3S3 785 aa10.89□□□□□ -0.67
CYLD-213ENST00000568744 DOLKQ9UPQ8 538 aa10.89□□□□□ -0.67
CYLD-213ENST00000568744 FSHRP23945 695 aa10.88□□□□□ -0.67
CYLD-213ENST00000568744 TSGA10IPQ3SY00 556 aa10.88□□□□□ -0.67
CYLD-213ENST00000568744 OXLD1Q5BKU9 147 aa10.88□□□□□ -0.67
CYLD-213ENST00000568744 CCDC85AQ96PX6 553 aaPredicted RBP10.88□□□□□ -0.67
CYLD-213ENST00000568744 MAP4K5Q9Y4K4 846 aa10.88□□□□□ -0.67
CYLD-213ENST00000568744 PCDHB11Q9Y5F2 797 aa10.88□□□□□ -0.67
CYLD-213ENST00000568744 ALDH1A1P00352 501 aa10.87□□□□□ -0.67
CYLD-213ENST00000568744 NCOA4Q13772 614 aa10.87□□□□□ -0.67
CYLD-213ENST00000568744 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
CYLD-213ENST00000568744 ESPNB1AK53 854 aa10.86□□□□□ -0.67
CYLD-213ENST00000568744 TNFRSF10AO00220 468 aa10.86□□□□□ -0.67
CYLD-213ENST00000568744 SIAH2O43255 324 aa10.86□□□□□ -0.67
CYLD-213ENST00000568744 MAP7D1Q3KQU3 841 aa10.86□□□□□ -0.67
CYLD-213ENST00000568744 INTS6LQ5JSJ4 861 aaKnown RBP10.86□□□□□ -0.67
CYLD-213ENST00000568744 PBXIP1Q96AQ6 731 aa10.86□□□□□ -0.67
CYLD-213ENST00000568744 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
CYLD-213ENST00000568744 EML3Q32P44 896 aa10.85□□□□□ -0.67
CYLD-213ENST00000568744 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
CYLD-213ENST00000568744 CDK15Q96Q40 435 aa10.85□□□□□ -0.67
CYLD-213ENST00000568744 VRTNQ9H8Y1 702 aa10.85□□□□□ -0.67
CYLD-213ENST00000568744 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
CYLD-213ENST00000568744 ADH1CP00326 375 aa10.84□□□□□ -0.67
CYLD-213ENST00000568744 ESF1Q9H501 851 aaKnown RBP10.84□□□□□ -0.67
CYLD-213ENST00000568744 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
CYLD-213ENST00000568744 WASF2Q9Y6W5 498 aa10.84□□□□□ -0.67
CYLD-213ENST00000568744 PLEKHM2Q8IWE5 1019 aa10.83□□□□□ -0.68
CYLD-213ENST00000568744 CYP4X1Q8N118 509 aa10.83□□□□□ -0.68
CYLD-213ENST00000568744 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
CYLD-213ENST00000568744 MKRN1Q9UHC7 482 aaKnown RBP10.83□□□□□ -0.68
CYLD-213ENST00000568744 ERVH48-1M5A8F1 160 aa10.82□□□□□ -0.68
CYLD-213ENST00000568744 GRM5P41594 1212 aa10.82□□□□□ -0.68
CYLD-213ENST00000568744 TRAF7Q6Q0C0 670 aa10.82□□□□□ -0.68
CYLD-213ENST00000568744 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
CYLD-213ENST00000568744 DHX9Q08211 1270 aaKnown RBP10.81□□□□□ -0.68
CYLD-213ENST00000568744 CCDC116Q8IYX3 515 aa10.81□□□□□ -0.68
CYLD-213ENST00000568744 MPNDQ8N594 471 aa10.81□□□□□ -0.68
CYLD-213ENST00000568744 SNIP1Q8TAD8 396 aaKnown RBP10.81□□□□□ -0.68
CYLD-213ENST00000568744 TMPRSS4Q9NRS4 437 aa10.81□□□□□ -0.68
CYLD-213ENST00000568744 LZTS3O60299 673 aaPredicted RBP10.8□□□□□ -0.68
CYLD-213ENST00000568744 MYCP01106 439 aaPredicted RBP10.8□□□□□ -0.68
CYLD-213ENST00000568744 NR5A1Q13285 461 aa10.8□□□□□ -0.68
CYLD-213ENST00000568744 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
CYLD-213ENST00000568744 CHIC2Q9UKJ5 165 aa10.8□□□□□ -0.68
CYLD-213ENST00000568744 RASA1P20936 1047 aa10.79□□□□□ -0.68
CYLD-213ENST00000568744 NNTQ13423 1086 aa10.79□□□□□ -0.68
CYLD-213ENST00000568744 KANK4Q5T7N3 995 aaPredicted RBP10.79□□□□□ -0.68
CYLD-213ENST00000568744 CYLDQ9NQC7 956 aa10.79□□□□□ -0.68
CYLD-213ENST00000568744 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 J3QL48 77 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 GDF9O60383 454 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 NR3C2P08235 984 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 PSME1Q06323 249 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 USP4Q13107 963 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 PPP1R26Q5T8A7 1209 aaPredicted RBP10.78□□□□□ -0.68
CYLD-213ENST00000568744 LARP1Q6PKG0 1096 aaKnown RBP10.78□□□□□ -0.68
CYLD-213ENST00000568744 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 SIRT1Q96EB6 747 aa10.78□□□□□ -0.68
CYLD-213ENST00000568744 CSB-PGBD3P0DP91 1061 aa10.77□□□□□ -0.69
CYLD-213ENST00000568744 SRPK2P78362 688 aaKnown RBP10.77□□□□□ -0.69
CYLD-213ENST00000568744 SCTRP47872 440 aa10.76□□□□□ -0.69
CYLD-213ENST00000568744 RETREG2Q8NC44 543 aa10.76□□□□□ -0.69
CYLD-213ENST00000568744 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
CYLD-213ENST00000568744 ZNF594Q96JF6 807 aaPredicted RBP10.76□□□□□ -0.69
CYLD-213ENST00000568744 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
CYLD-213ENST00000568744 ATP1A2P50993 1020 aa10.75□□□□□ -0.69
CYLD-213ENST00000568744 GTF2IP78347 998 aa10.75□□□□□ -0.69
CYLD-213ENST00000568744 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
CYLD-213ENST00000568744 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
CYLD-213ENST00000568744 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L21D6R901 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L18D6R9N7 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L22D6RA61 530 aa10.74□□□□□ -0.69
CYLD-213ENST00000568744 USP17L17D6RBQ6 530 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms