RNA–Protein interactions for RNA: ENST00000567743.5

NAE1-218, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 1 (best)

Gene NAE1, Length 1,460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-218ENST00000567743 CCDC9Q9Y3X0 531 aaKnown RBP24.52■■□□□ 1.52
NAE1-218ENST00000567743 COG3Q96JB2 828 aa24.51■■□□□ 1.51
NAE1-218ENST00000567743 STRN4Q9NRL3 753 aa24.51■■□□□ 1.51
NAE1-218ENST00000567743 EP400Q96L91 3159 aa24.51■■□□□ 1.51
NAE1-218ENST00000567743 AXIN2Q9Y2T1 843 aa24.51■■□□□ 1.51
NAE1-218ENST00000567743 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
NAE1-218ENST00000567743 ONECUT3O60422 494 aaPredicted RBP24.5■■□□□ 1.51
NAE1-218ENST00000567743 GGNBP2Q9H3C7 697 aa24.5■■□□□ 1.51
NAE1-218ENST00000567743 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
NAE1-218ENST00000567743 LARP1Q6PKG0 1096 aaKnown RBP24.48■■□□□ 1.51
NAE1-218ENST00000567743 PANK3Q9H999 370 aa24.47■■□□□ 1.51
NAE1-218ENST00000567743 CRB1P82279 1406 aa24.46■■□□□ 1.51
NAE1-218ENST00000567743 EVA1CP58658 441 aa24.46■■□□□ 1.51
NAE1-218ENST00000567743 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
NAE1-218ENST00000567743 FAM98CQ17RN3 349 aaKnown RBP24.45■■□□□ 1.5
NAE1-218ENST00000567743 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
NAE1-218ENST00000567743 CGNL1Q0VF96 1302 aa24.44■■□□□ 1.5
NAE1-218ENST00000567743 WASHC2AQ641Q2 1341 aa24.44■■□□□ 1.5
NAE1-218ENST00000567743 SEPT12Q8IYM1 358 aa24.44■■□□□ 1.5
NAE1-218ENST00000567743 PARP4Q9UKK3 1724 aaKnown RBP24.43■■□□□ 1.5
NAE1-218ENST00000567743 WDR17Q8IZU2 1322 aa24.43■■□□□ 1.5
NAE1-218ENST00000567743 FBLN1P23142 703 aa24.43■■□□□ 1.5
NAE1-218ENST00000567743 FAM208AQ9UK61 1670 aaKnown RBP24.42■■□□□ 1.5
NAE1-218ENST00000567743 BLMP54132 1417 aaPredicted RBP24.42■■□□□ 1.5
NAE1-218ENST00000567743 MAP3K19Q56UN5 1328 aa24.41■■□□□ 1.5
NAE1-218ENST00000567743 USP35Q9P2H5 1018 aa24.41■■□□□ 1.5
NAE1-218ENST00000567743 MAP2P11137 1827 aaKnown RBP24.41■■□□□ 1.5
NAE1-218ENST00000567743 ERBB3P21860 1342 aa24.4■■□□□ 1.5
NAE1-218ENST00000567743 BARGINQ6ZT62 677 aa24.39■■□□□ 1.5
NAE1-218ENST00000567743 TCP11L2Q8N4U5 519 aa24.38■■□□□ 1.49
NAE1-218ENST00000567743 RGPD2P0DJD1 1756 aa24.38■■□□□ 1.49
NAE1-218ENST00000567743 RTL1A6NKG5 1358 aa24.38■■□□□ 1.49
NAE1-218ENST00000567743 LRRC37A3O60309 1634 aa24.38■■□□□ 1.49
NAE1-218ENST00000567743 IP6K1Q92551 441 aa24.38■■□□□ 1.49
NAE1-218ENST00000567743 RRS1Q15050 365 aaKnown RBP24.37■■□□□ 1.49
NAE1-218ENST00000567743 TOM1L2Q6ZVM7 507 aa24.37■■□□□ 1.49
NAE1-218ENST00000567743 THRAP3Q9Y2W1 955 aaKnown RBP24.37■■□□□ 1.49
NAE1-218ENST00000567743 NSD2O96028 1365 aa24.37■■□□□ 1.49
NAE1-218ENST00000567743 A0A0G2JS52 829 aa24.35■■□□□ 1.49
NAE1-218ENST00000567743 HOXC9P31274 260 aa24.35■■□□□ 1.49
NAE1-218ENST00000567743 MYT1Q01538 1121 aa24.35■■□□□ 1.49
NAE1-218ENST00000567743 UPF1Q92900 1129 aaKnown RBP eCLIP24.35■■□□□ 1.49
NAE1-218ENST00000567743 CSB-PGBD3P0DP91 1061 aa24.33■■□□□ 1.49
NAE1-218ENST00000567743 ANKRD24Q8TF21 1146 aa24.33■■□□□ 1.49
NAE1-218ENST00000567743 CARD10Q9BWT7 1032 aa24.33■■□□□ 1.49
NAE1-218ENST00000567743 KIF24Q5T7B8 1368 aa24.33■■□□□ 1.48
NAE1-218ENST00000567743 KRT27Q7Z3Y8 459 aa24.32■■□□□ 1.48
NAE1-218ENST00000567743 DISP2A7MBM2 1401 aa24.32■■□□□ 1.48
NAE1-218ENST00000567743 PER1O15534 1290 aaPredicted RBP24.32■■□□□ 1.48
NAE1-218ENST00000567743 AMPHP49418 695 aa24.32■■□□□ 1.48
NAE1-218ENST00000567743 AMER1Q5JTC6 1135 aaPredicted RBP24.31■■□□□ 1.48
NAE1-218ENST00000567743 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
NAE1-218ENST00000567743 FLT4P35916 1363 aa24.3■■□□□ 1.48
NAE1-218ENST00000567743 EMILIN1Q9Y6C2 1016 aa24.29■■□□□ 1.48
NAE1-218ENST00000567743 INSRP06213 1382 aa24.27■■□□□ 1.48
NAE1-218ENST00000567743 SMG6Q86US8 1419 aaKnown RBP24.27■■□□□ 1.48
NAE1-218ENST00000567743 NLRP2Q9NX02 1062 aa24.26■■□□□ 1.47
NAE1-218ENST00000567743 HSP90AB2PQ58FF8 381 aa24.26■■□□□ 1.47
NAE1-218ENST00000567743 LTV1Q96GA3 475 aaPredicted RBP24.26■■□□□ 1.47
NAE1-218ENST00000567743 POLKQ9UBT6 870 aa24.25■■□□□ 1.47
NAE1-218ENST00000567743 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
NAE1-218ENST00000567743 TNS1Q9HBL0 1735 aaKnown RBP24.24■■□□□ 1.47
NAE1-218ENST00000567743 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
NAE1-218ENST00000567743 FAM182BQ5T319 152 aa24.24■■□□□ 1.47
NAE1-218ENST00000567743 TNNT2P45379 298 aaPredicted RBP24.23■■□□□ 1.47
NAE1-218ENST00000567743 CDCA7Q9BWT1 371 aaPredicted RBP24.23■■□□□ 1.47
NAE1-218ENST00000567743 NPC1L1Q9UHC9 1359 aa24.22■■□□□ 1.47
NAE1-218ENST00000567743 SBF2Q86WG5 1849 aa24.22■■□□□ 1.47
NAE1-218ENST00000567743 TNS2Q63HR2 1409 aa24.22■■□□□ 1.47
NAE1-218ENST00000567743 SHANK3Q9BYB0 1731 aa24.21■■□□□ 1.47
NAE1-218ENST00000567743 MORC1Q86VD1 984 aa24.21■■□□□ 1.47
NAE1-218ENST00000567743 DDB1Q16531 1140 aa24.19■■□□□ 1.46
NAE1-218ENST00000567743 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
NAE1-218ENST00000567743 PDE3BQ13370 1112 aa24.19■■□□□ 1.46
NAE1-218ENST00000567743 IL2RBP14784 551 aa24.18■■□□□ 1.46
NAE1-218ENST00000567743 NBPF6Q5VWK0 638 aa24.18■■□□□ 1.46
NAE1-218ENST00000567743 NBPF4Q96M43 638 aa24.18■■□□□ 1.46
NAE1-218ENST00000567743 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
NAE1-218ENST00000567743 MEGF6O75095 1541 aa24.17■■□□□ 1.46
NAE1-218ENST00000567743 OVOS2A0A0G2JMS6 1433 aa24.16■■□□□ 1.46
NAE1-218ENST00000567743 CC2D1BQ5T0F9 858 aaKnown RBP24.16■■□□□ 1.46
NAE1-218ENST00000567743 CCDC125Q86Z20 511 aa24.16■■□□□ 1.46
NAE1-218ENST00000567743 FAM196AQ6ZSG2 479 aa24.14■■□□□ 1.46
NAE1-218ENST00000567743 USHBP1Q8N6Y0 703 aa24.13■■□□□ 1.45
NAE1-218ENST00000567743 MARCH10Q8NA82 808 aaPredicted RBP24.13■■□□□ 1.45
NAE1-218ENST00000567743 BCL9O00512 1426 aa24.12■■□□□ 1.45
NAE1-218ENST00000567743 EXOC5O00471 708 aa24.12■■□□□ 1.45
NAE1-218ENST00000567743 PKD1L3Q7Z443 1732 aa24.11■■□□□ 1.45
NAE1-218ENST00000567743 EIF4A2Q14240 407 aaKnown RBP24.11■■□□□ 1.45
NAE1-218ENST00000567743 NHSQ6T4R5 1651 aa24.08■■□□□ 1.45
NAE1-218ENST00000567743 EYA1Q99502 592 aa24.07■■□□□ 1.44
NAE1-218ENST00000567743 TRIM37O94972 964 aa24.07■■□□□ 1.44
NAE1-218ENST00000567743 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
NAE1-218ENST00000567743 RGPD3A6NKT7 1758 aaPredicted RBP24.05■■□□□ 1.44
NAE1-218ENST00000567743 RGPD4Q7Z3J3 1758 aa24.05■■□□□ 1.44
NAE1-218ENST00000567743 MTHFSP49914 203 aa24.05■■□□□ 1.44
NAE1-218ENST00000567743 SF3B2Q13435 895 aaKnown RBP24.05■■□□□ 1.44
NAE1-218ENST00000567743 DEFB132Q7Z7B7 95 aa24.05■■□□□ 1.44
NAE1-218ENST00000567743 IGSF1Q8N6C5 1336 aa24.05■■□□□ 1.44
NAE1-218ENST00000567743 COL3A1P02461 1466 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms