RNA–Protein interactions for RNA: ENST00000567742.1

AP000439.4-201, humanhuman

TSL 3 BASIC

Gene AP000439.4, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.4-201ENST00000567742 ILDR2Q71H61 639 aa20.8■□□□□ 0.92
AP000439.4-201ENST00000567742 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
AP000439.4-201ENST00000567742 COL5A2P05997 1499 aaPredicted RBP20.8■□□□□ 0.92
AP000439.4-201ENST00000567742 GJD4Q96KN9 370 aaPredicted RBP20.79■□□□□ 0.92
AP000439.4-201ENST00000567742 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
AP000439.4-201ENST00000567742 EVA1CP58658 441 aa20.78■□□□□ 0.92
AP000439.4-201ENST00000567742 STRN4Q9NRL3 753 aa20.77■□□□□ 0.92
AP000439.4-201ENST00000567742 CCDC9Q9Y3X0 531 aaKnown RBP20.77■□□□□ 0.92
AP000439.4-201ENST00000567742 WNK3Q9BYP7 1800 aa20.76■□□□□ 0.91
AP000439.4-201ENST00000567742 BLMP54132 1417 aaPredicted RBP20.75■□□□□ 0.91
AP000439.4-201ENST00000567742 SPATA31A5Q5VU36 1347 aa20.74■□□□□ 0.91
AP000439.4-201ENST00000567742 SPATA31A7Q8IWB4 1347 aa20.74■□□□□ 0.91
AP000439.4-201ENST00000567742 BRWD3Q6RI45 1802 aa20.74■□□□□ 0.91
AP000439.4-201ENST00000567742 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
AP000439.4-201ENST00000567742 RGS12O14924 1447 aa20.73■□□□□ 0.91
AP000439.4-201ENST00000567742 PER1O15534 1290 aaPredicted RBP20.73■□□□□ 0.91
AP000439.4-201ENST00000567742 AXIN2Q9Y2T1 843 aa20.73■□□□□ 0.91
AP000439.4-201ENST00000567742 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
AP000439.4-201ENST00000567742 CRB1P82279 1406 aa20.72■□□□□ 0.91
AP000439.4-201ENST00000567742 PEAK1Q9H792 1746 aa20.72■□□□□ 0.91
AP000439.4-201ENST00000567742 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
AP000439.4-201ENST00000567742 AMPHP49418 695 aa20.71■□□□□ 0.91
AP000439.4-201ENST00000567742 IP6K1Q92551 441 aa20.71■□□□□ 0.91
AP000439.4-201ENST00000567742 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
AP000439.4-201ENST00000567742 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
AP000439.4-201ENST00000567742 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.91
AP000439.4-201ENST00000567742 RGPD2P0DJD1 1756 aa20.7■□□□□ 0.9
AP000439.4-201ENST00000567742 RRS1Q15050 365 aaKnown RBP20.7■□□□□ 0.9
AP000439.4-201ENST00000567742 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.9
AP000439.4-201ENST00000567742 LARP1Q6PKG0 1096 aaKnown RBP20.7■□□□□ 0.9
AP000439.4-201ENST00000567742 FBLN1P23142 703 aa20.69■□□□□ 0.9
AP000439.4-201ENST00000567742 NPC1L1Q9UHC9 1359 aa20.69■□□□□ 0.9
AP000439.4-201ENST00000567742 CSB-PGBD3P0DP91 1061 aa20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 HOXC9P31274 260 aa20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 TOM1L2Q6ZVM7 507 aa20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 MORC1Q86VD1 984 aa20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 THRAP3Q9Y2W1 955 aaKnown RBP20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 ERBB3P21860 1342 aa20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 FLT4P35916 1363 aa20.68■□□□□ 0.9
AP000439.4-201ENST00000567742 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
AP000439.4-201ENST00000567742 ONECUT3O60422 494 aaPredicted RBP20.67■□□□□ 0.9
AP000439.4-201ENST00000567742 TCP11L2Q8N4U5 519 aa20.66■□□□□ 0.9
AP000439.4-201ENST00000567742 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
AP000439.4-201ENST00000567742 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
AP000439.4-201ENST00000567742 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
AP000439.4-201ENST00000567742 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
AP000439.4-201ENST00000567742 BARGINQ6ZT62 677 aa20.65■□□□□ 0.9
AP000439.4-201ENST00000567742 INSRP06213 1382 aa20.64■□□□□ 0.89
AP000439.4-201ENST00000567742 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
AP000439.4-201ENST00000567742 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
AP000439.4-201ENST00000567742 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
AP000439.4-201ENST00000567742 CARD10Q9BWT7 1032 aa20.63■□□□□ 0.89
AP000439.4-201ENST00000567742 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
AP000439.4-201ENST00000567742 A0A0G2JS52 829 aa20.62■□□□□ 0.89
AP000439.4-201ENST00000567742 MYT1Q01538 1121 aa20.62■□□□□ 0.89
AP000439.4-201ENST00000567742 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
AP000439.4-201ENST00000567742 LRRC37A3O60309 1634 aa20.6■□□□□ 0.89
AP000439.4-201ENST00000567742 PPM1GO15355 546 aaPredicted RBP20.6■□□□□ 0.89
AP000439.4-201ENST00000567742 LTV1Q96GA3 475 aaPredicted RBP20.6■□□□□ 0.89
AP000439.4-201ENST00000567742 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
AP000439.4-201ENST00000567742 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
AP000439.4-201ENST00000567742 CDCA7Q9BWT1 371 aaPredicted RBP20.59■□□□□ 0.89
AP000439.4-201ENST00000567742 SOCS7O14512 581 aa20.57■□□□□ 0.88
AP000439.4-201ENST00000567742 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
AP000439.4-201ENST00000567742 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
AP000439.4-201ENST00000567742 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
AP000439.4-201ENST00000567742 DISP2A7MBM2 1401 aa20.55■□□□□ 0.88
AP000439.4-201ENST00000567742 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
AP000439.4-201ENST00000567742 IL2RBP14784 551 aa20.52■□□□□ 0.88
AP000439.4-201ENST00000567742 DDB1Q16531 1140 aa20.52■□□□□ 0.88
AP000439.4-201ENST00000567742 PDE3BQ13370 1112 aa20.51■□□□□ 0.87
AP000439.4-201ENST00000567742 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
AP000439.4-201ENST00000567742 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
AP000439.4-201ENST00000567742 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
AP000439.4-201ENST00000567742 MTHFSP49914 203 aa20.5■□□□□ 0.87
AP000439.4-201ENST00000567742 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
AP000439.4-201ENST00000567742 TNS2Q63HR2 1409 aa20.5■□□□□ 0.87
AP000439.4-201ENST00000567742 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
AP000439.4-201ENST00000567742 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
AP000439.4-201ENST00000567742 SHANK3Q9BYB0 1731 aa20.49■□□□□ 0.87
AP000439.4-201ENST00000567742 EXOC5O00471 708 aa20.48■□□□□ 0.87
AP000439.4-201ENST00000567742 PARD3Q8TEW0 1356 aa20.47■□□□□ 0.87
AP000439.4-201ENST00000567742 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
AP000439.4-201ENST00000567742 USHBP1Q8N6Y0 703 aa20.46■□□□□ 0.87
AP000439.4-201ENST00000567742 EYA1Q99502 592 aa20.46■□□□□ 0.87
AP000439.4-201ENST00000567742 OVOS2A0A0G2JMS6 1433 aa20.45■□□□□ 0.86
AP000439.4-201ENST00000567742 MEGF6O75095 1541 aa20.45■□□□□ 0.86
AP000439.4-201ENST00000567742 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
AP000439.4-201ENST00000567742 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
AP000439.4-201ENST00000567742 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
AP000439.4-201ENST00000567742 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
AP000439.4-201ENST00000567742 FAM196AQ6ZSG2 479 aa20.44■□□□□ 0.86
AP000439.4-201ENST00000567742 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
AP000439.4-201ENST00000567742 TATP17735 454 aaPredicted RBP20.43■□□□□ 0.86
AP000439.4-201ENST00000567742 RALBP1Q15311 655 aa20.43■□□□□ 0.86
AP000439.4-201ENST00000567742 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
AP000439.4-201ENST00000567742 TNS1Q9HBL0 1735 aaKnown RBP20.43■□□□□ 0.86
AP000439.4-201ENST00000567742 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
AP000439.4-201ENST00000567742 IL13P35225 146 aa20.42■□□□□ 0.86
AP000439.4-201ENST00000567742 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms