RNA–Protein interactions for RNA: ENST00000567641.5

NUP93-215, Transcript of nucleoporin 93, human

TSL 4

Gene NUP93, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP93-215	ENST00000567641	RRS1	Q15050	365 aa	Known RBP	10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	BARGIN	Q6ZT62	677 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	LTV1	Q96GA3	475 aa	Predicted RBP	10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	THRAP3	Q9Y2W1	955 aa	Known RBP	10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	PLCH1	Q4KWH8	1693 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	OVOS2	A0A0J9YW53	1432 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	OVOS2	Q6IE36	1432 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	CGNL1	Q0VF96	1302 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	KIF7	Q2M1P5	1343 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	WDR17	Q8IZU2	1322 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	CRYBG1	Q9Y4K1	1723 aa		10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	COL5A2	P05997	1499 aa	Predicted RBP	10.81	□□□□□ -0.68
NUP93-215	ENST00000567641	PDE3B	Q13370	1112 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	FAM182B	Q5T319	152 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	ANKRD24	Q8TF21	1146 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	IP6K1	Q92551	441 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	NLRP2	Q9NX02	1062 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	CRB1	P82279	1406 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	NWD2	Q9ULI1	1742 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	MAP3K19	Q56UN5	1328 aa		10.8	□□□□□ -0.68
NUP93-215	ENST00000567641	MON2	Q7Z3U7	1717 aa		10.79	□□□□□ -0.68
NUP93-215	ENST00000567641	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.79	□□□□□ -0.68
NUP93-215	ENST00000567641	CARD10	Q9BWT7	1032 aa		10.79	□□□□□ -0.68
NUP93-215	ENST00000567641	KNSTRN	Q9Y448	316 aa		10.79	□□□□□ -0.68
NUP93-215	ENST00000567641	NFAT5	O94916	1531 aa		10.79	□□□□□ -0.68
NUP93-215	ENST00000567641	PPM1G	O15355	546 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP93-215	ENST00000567641	HOXC9	P31274	260 aa		10.78	□□□□□ -0.68
NUP93-215	ENST00000567641	TNNT2	P45379	298 aa	Predicted RBP	10.78	□□□□□ -0.68
NUP93-215	ENST00000567641	SF3B2	Q13435	895 aa	Known RBP	10.77	□□□□□ -0.69
NUP93-215	ENST00000567641	CCDC125	Q86Z20	511 aa		10.77	□□□□□ -0.69
NUP93-215	ENST00000567641	ERBB3	P21860	1342 aa		10.77	□□□□□ -0.69
NUP93-215	ENST00000567641	NRAP	Q86VF7	1730 aa		10.76	□□□□□ -0.69
NUP93-215	ENST00000567641	DDB1	Q16531	1140 aa		10.76	□□□□□ -0.69
NUP93-215	ENST00000567641	MORC1	Q86VD1	984 aa		10.76	□□□□□ -0.69
NUP93-215	ENST00000567641	EMILIN1	Q9Y6C2	1016 aa		10.76	□□□□□ -0.69
NUP93-215	ENST00000567641	LMO7	Q8WWI1	1683 aa		10.76	□□□□□ -0.69
NUP93-215	ENST00000567641	EXOC5	O00471	708 aa		10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	CNGB1	Q14028	1251 aa	Predicted RBP	10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	HSP90AB2P	Q58FF8	381 aa		10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	FAM196A	Q6ZSG2	479 aa		10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	WASHC2A	Q641Q2	1341 aa		10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	CCDC7	Q96M83	1385 aa		10.75	□□□□□ -0.69
NUP93-215	ENST00000567641	BLM	P54132	1417 aa	Predicted RBP	10.74	□□□□□ -0.69
NUP93-215	ENST00000567641	IL2RB	P14784	551 aa		10.73	□□□□□ -0.69
NUP93-215	ENST00000567641	POLK	Q9UBT6	870 aa		10.73	□□□□□ -0.69
NUP93-215	ENST00000567641	MYOM1	P52179	1685 aa		10.73	□□□□□ -0.69
NUP93-215	ENST00000567641	PER1	O15534	1290 aa	Predicted RBP	10.72	□□□□□ -0.69
NUP93-215	ENST00000567641	TRIM37	O94972	964 aa		10.72	□□□□□ -0.69
NUP93-215	ENST00000567641	NBPF6	Q5VWK0	638 aa		10.72	□□□□□ -0.69
NUP93-215	ENST00000567641	NBPF4	Q96M43	638 aa		10.72	□□□□□ -0.69
NUP93-215	ENST00000567641	RTL1	A6NKG5	1358 aa		10.72	□□□□□ -0.69
NUP93-215	ENST00000567641	FLT4	P35916	1363 aa		10.72	□□□□□ -0.69
NUP93-215	ENST00000567641	ABCC6	O95255	1503 aa		10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	COL18A1	P39060	1754 aa		10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	CC2D1B	Q5T0F9	858 aa	Known RBP	10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	DEFB132	Q7Z7B7	95 aa		10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	USHBP1	Q8N6Y0	703 aa		10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	MARCH10	Q8NA82	808 aa	Predicted RBP	10.71	□□□□□ -0.69
NUP93-215	ENST00000567641	USP54	Q70EL1	1684 aa		10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	SMG6	Q86US8	1419 aa	Known RBP	10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	NSD2	O96028	1365 aa		10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	INSR	P06213	1382 aa		10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	KIF24	Q5T7B8	1368 aa		10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	APBA3	O96018	575 aa		10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	BAG6	P46379	1132 aa		10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	DDX54	Q8TDD1	881 aa	Known RBP	10.7	□□□□□ -0.7
NUP93-215	ENST00000567641	ZEB1	P37275	1124 aa	Predicted RBP	10.69	□□□□□ -0.7
NUP93-215	ENST00000567641	EN1	Q05925	392 aa	Predicted RBP	10.69	□□□□□ -0.7
NUP93-215	ENST00000567641	THSD7A	Q9UPZ6	1657 aa		10.69	□□□□□ -0.7
NUP93-215	ENST00000567641	DISP2	A7MBM2	1401 aa		10.68	□□□□□ -0.7
NUP93-215	ENST00000567641	TAT	P17735	454 aa	Predicted RBP	10.68	□□□□□ -0.7
NUP93-215	ENST00000567641	RAPGEF4	Q8WZA2	1011 aa		10.68	□□□□□ -0.7
NUP93-215	ENST00000567641	EIF4A2	Q14240	407 aa	Known RBP	10.67	□□□□□ -0.7
NUP93-215	ENST00000567641	ZCRB1	Q8TBF4	217 aa	Known RBP	10.67	□□□□□ -0.7
NUP93-215	ENST00000567641	ACSBG1	Q96GR2	724 aa		10.67	□□□□□ -0.7
NUP93-215	ENST00000567641	OVOS2	A0A0G2JMS6	1433 aa		10.67	□□□□□ -0.7
NUP93-215	ENST00000567641	EZH2	Q15910	746 aa	Known RBP	10.66	□□□□□ -0.7
NUP93-215	ENST00000567641	EYA1	Q99502	592 aa		10.66	□□□□□ -0.7
NUP93-215	ENST00000567641	MTHFS	P49914	203 aa		10.65	□□□□□ -0.7
NUP93-215	ENST00000567641	PTF1A	Q7RTS3	328 aa		10.65	□□□□□ -0.7
NUP93-215	ENST00000567641	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.65	□□□□□ -0.7
NUP93-215	ENST00000567641	BRWD3	Q6RI45	1802 aa		10.65	□□□□□ -0.71
NUP93-215	ENST00000567641	LTN1	O94822	1766 aa		10.65	□□□□□ -0.71
NUP93-215	ENST00000567641	KIF20B	Q96Q89	1820 aa		10.64	□□□□□ -0.71
NUP93-215	ENST00000567641	KCNQ2	O43526	872 aa		10.64	□□□□□ -0.71
NUP93-215	ENST00000567641	CAMKK2	Q96RR4	588 aa		10.64	□□□□□ -0.71
NUP93-215	ENST00000567641	TNS2	Q63HR2	1409 aa		10.64	□□□□□ -0.71
NUP93-215	ENST00000567641	RGPD5	Q99666	1765 aa		10.63	□□□□□ -0.71
NUP93-215	ENST00000567641	SYTL4	Q96C24	671 aa	Predicted RBP	10.63	□□□□□ -0.71
NUP93-215	ENST00000567641	DDX10	Q13206	875 aa	Known RBP	10.62	□□□□□ -0.71
NUP93-215	ENST00000567641	SPG7	Q9UQ90	795 aa		10.62	□□□□□ -0.71
NUP93-215	ENST00000567641	MEGF6	O75095	1541 aa		10.62	□□□□□ -0.71
NUP93-215	ENST00000567641	NPC1L1	Q9UHC9	1359 aa		10.62	□□□□□ -0.71
NUP93-215	ENST00000567641	PEAK1	Q9H792	1746 aa		10.61	□□□□□ -0.71
NUP93-215	ENST00000567641	PARP4	Q9UKK3	1724 aa	Known RBP	10.61	□□□□□ -0.71
NUP93-215	ENST00000567641	PLSCR1	O15162	318 aa		10.61	□□□□□ -0.71
NUP93-215	ENST00000567641	PRIM1	P49642	420 aa	Known RBP	10.61	□□□□□ -0.71
NUP93-215	ENST00000567641	LRRC37A3	O60309	1634 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms