RNA–Protein interactions for RNA: ENST00000567006.1

ACSM3-210, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 2

Gene ACSM3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-210ENST00000567006 LINC00528Q8N1L1 170 aa10.46□□□□□ -0.73
ACSM3-210ENST00000567006 CDV3Q9UKY7 258 aaKnown RBP10.46□□□□□ -0.73
ACSM3-210ENST00000567006 GMPRP36959 345 aa10.45□□□□□ -0.74
ACSM3-210ENST00000567006 ZBTB33Q86T24 672 aa10.45□□□□□ -0.74
ACSM3-210ENST00000567006 TSEN34Q9BSV6 310 aaKnown RBP10.45□□□□□ -0.74
ACSM3-210ENST00000567006 SOBPA7XYQ1 873 aa10.44□□□□□ -0.74
ACSM3-210ENST00000567006 AP1G2O75843 785 aa10.44□□□□□ -0.74
ACSM3-210ENST00000567006 NR6A1Q15406 480 aa10.44□□□□□ -0.74
ACSM3-210ENST00000567006 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
ACSM3-210ENST00000567006 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
ACSM3-210ENST00000567006 FAM181BA6NEQ2 426 aa10.43□□□□□ -0.74
ACSM3-210ENST00000567006 PTK2Q05397 1052 aa10.43□□□□□ -0.74
ACSM3-210ENST00000567006 FBXO31Q5XUX0 539 aaPredicted RBP10.43□□□□□ -0.74
ACSM3-210ENST00000567006 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
ACSM3-210ENST00000567006 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
ACSM3-210ENST00000567006 DHX9Q08211 1270 aaKnown RBP10.41□□□□□ -0.74
ACSM3-210ENST00000567006 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
ACSM3-210ENST00000567006 ERBB4Q15303 1308 aa10.4□□□□□ -0.74
ACSM3-210ENST00000567006 PPP1R26Q5T8A7 1209 aaPredicted RBP10.4□□□□□ -0.74
ACSM3-210ENST00000567006 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
ACSM3-210ENST00000567006 ZSCAN1Q8NBB4 408 aa10.39□□□□□ -0.75
ACSM3-210ENST00000567006 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
ACSM3-210ENST00000567006 Q6ZVU0 165 aa10.37□□□□□ -0.75
ACSM3-210ENST00000567006 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
ACSM3-210ENST00000567006 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
ACSM3-210ENST00000567006 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.36□□□□□ -0.75
ACSM3-210ENST00000567006 ADAM32Q8TC27 787 aa10.36□□□□□ -0.75
ACSM3-210ENST00000567006 GOPCQ9HD26 462 aa10.36□□□□□ -0.75
ACSM3-210ENST00000567006 DNMT3LQ9UJW3 386 aa10.36□□□□□ -0.75
ACSM3-210ENST00000567006 TTLL8A6PVC2 850 aa10.35□□□□□ -0.75
ACSM3-210ENST00000567006 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
ACSM3-210ENST00000567006 RFC5P40937 340 aa10.35□□□□□ -0.75
ACSM3-210ENST00000567006 NBPF20Q3BBV1 942 aa10.35□□□□□ -0.75
ACSM3-210ENST00000567006 CBLBQ13191 982 aa10.34□□□□□ -0.75
ACSM3-210ENST00000567006 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
ACSM3-210ENST00000567006 PCMTD1Q96MG8 357 aaPredicted RBP10.34□□□□□ -0.75
ACSM3-210ENST00000567006 OCSTAMPQ9BR26 566 aa10.34□□□□□ -0.75
ACSM3-210ENST00000567006 EPS8L1Q8TE68 723 aa10.33□□□□□ -0.76
ACSM3-210ENST00000567006 HMX1Q9NP08 348 aaPredicted RBP10.33□□□□□ -0.76
ACSM3-210ENST00000567006 SPINT1O43278 529 aa10.32□□□□□ -0.76
ACSM3-210ENST00000567006 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
ACSM3-210ENST00000567006 DZIP3Q86Y13 1208 aaKnown RBP10.32□□□□□ -0.76
ACSM3-210ENST00000567006 LORP23490 312 aaPredicted RBP10.31□□□□□ -0.76
ACSM3-210ENST00000567006 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
ACSM3-210ENST00000567006 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
ACSM3-210ENST00000567006 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
ACSM3-210ENST00000567006 PTSQ03393 145 aa10.28□□□□□ -0.76
ACSM3-210ENST00000567006 RELBQ01201 579 aa10.27□□□□□ -0.77
ACSM3-210ENST00000567006 RAB15P59190 212 aa10.26□□□□□ -0.77
ACSM3-210ENST00000567006 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
ACSM3-210ENST00000567006 IL27Q8NEV9 243 aa10.25□□□□□ -0.77
ACSM3-210ENST00000567006 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
ACSM3-210ENST00000567006 TMPRSS4Q9NRS4 437 aa10.25□□□□□ -0.77
ACSM3-210ENST00000567006 ESPNB1AK53 854 aa10.24□□□□□ -0.77
ACSM3-210ENST00000567006 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
ACSM3-210ENST00000567006 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
ACSM3-210ENST00000567006 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
ACSM3-210ENST00000567006 ERVH48-1M5A8F1 160 aa10.23□□□□□ -0.77
ACSM3-210ENST00000567006 CTSOP43234 321 aaPredicted RBP10.23□□□□□ -0.77
ACSM3-210ENST00000567006 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
ACSM3-210ENST00000567006 INSM2Q96T92 566 aaPredicted RBP10.23□□□□□ -0.77
ACSM3-210ENST00000567006 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
ACSM3-210ENST00000567006 ADH1AP07327 375 aa10.22□□□□□ -0.77
ACSM3-210ENST00000567006 ZNF395Q9H8N7 513 aaPredicted RBP10.22□□□□□ -0.77
ACSM3-210ENST00000567006 NANOS1Q8WY41 292 aaKnown RBP10.21□□□□□ -0.77
ACSM3-210ENST00000567006 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
ACSM3-210ENST00000567006 LILRA1O75019 489 aa10.2□□□□□ -0.78
ACSM3-210ENST00000567006 PTGIRP43119 386 aa10.2□□□□□ -0.78
ACSM3-210ENST00000567006 CCDC125Q86Z20 511 aa10.2□□□□□ -0.78
ACSM3-210ENST00000567006 ADD1P35611 737 aaKnown RBP10.19□□□□□ -0.78
ACSM3-210ENST00000567006 RNF217Q8TC41 542 aa10.19□□□□□ -0.78
ACSM3-210ENST00000567006 PCDHB9Q9Y5E1 797 aa10.19□□□□□ -0.78
ACSM3-210ENST00000567006 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
ACSM3-210ENST00000567006 GJD4Q96KN9 370 aaPredicted RBP10.18□□□□□ -0.78
ACSM3-210ENST00000567006 ITGA6P23229 1130 aa10.17□□□□□ -0.78
ACSM3-210ENST00000567006 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
ACSM3-210ENST00000567006 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
ACSM3-210ENST00000567006 FBXO45P0C2W1 286 aa10.16□□□□□ -0.78
ACSM3-210ENST00000567006 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
ACSM3-210ENST00000567006 CNTNAP3BQ96NU0 1288 aa10.16□□□□□ -0.78
ACSM3-210ENST00000567006 CNTNAP3Q9BZ76 1288 aa10.16□□□□□ -0.78
ACSM3-210ENST00000567006 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
ACSM3-210ENST00000567006 GIGYF1O75420 1035 aaPredicted RBP10.15□□□□□ -0.78
ACSM3-210ENST00000567006 BRPF1P55201 1214 aaPredicted RBP10.15□□□□□ -0.78
ACSM3-210ENST00000567006 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
ACSM3-210ENST00000567006 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
ACSM3-210ENST00000567006 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
ACSM3-210ENST00000567006 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
ACSM3-210ENST00000567006 KRT76Q01546 638 aa10.14□□□□□ -0.79
ACSM3-210ENST00000567006 LYSMD3Q7Z3D4 306 aa10.14□□□□□ -0.79
ACSM3-210ENST00000567006 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
ACSM3-210ENST00000567006 KDF1Q8NAX2 398 aaPredicted RBP10.14□□□□□ -0.79
ACSM3-210ENST00000567006 CDC14CA4D256 554 aa10.13□□□□□ -0.79
ACSM3-210ENST00000567006 ATP5J2-PTCD1G3V325 749 aa10.13□□□□□ -0.79
ACSM3-210ENST00000567006 SOCS7O14512 581 aa10.13□□□□□ -0.79
ACSM3-210ENST00000567006 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
ACSM3-210ENST00000567006 APBB1O00213 710 aa10.12□□□□□ -0.79
ACSM3-210ENST00000567006 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
ACSM3-210ENST00000567006 NR1H3Q13133 447 aa10.12□□□□□ -0.79
ACSM3-210ENST00000567006 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms