RNA–Protein interactions for RNA: ENST00000566617.1

COX4I1-212, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-212ENST00000566617 CGNL1Q0VF96 1302 aa39.09■■■■□ 3.85
COX4I1-212ENST00000566617 GGNBP2Q9H3C7 697 aa39.08■■■■□ 3.85
COX4I1-212ENST00000566617 STRN4Q9NRL3 753 aa39.07■■■■□ 3.85
COX4I1-212ENST00000566617 AXIN2Q9Y2T1 843 aa39.07■■■■□ 3.85
COX4I1-212ENST00000566617 RGPD5Q99666 1765 aa39.06■■■■□ 3.84
COX4I1-212ENST00000566617 ZBTB7CA1YPR0 619 aa39.06■■■■□ 3.84
COX4I1-212ENST00000566617 SPATA31A1Q5TZJ5 1347 aa39.06■■■■□ 3.84
COX4I1-212ENST00000566617 CCDC7Q96M83 1385 aa39.04■■■■□ 3.84
COX4I1-212ENST00000566617 LARP1Q6PKG0 1096 aaKnown RBP39.02■■■■□ 3.84
COX4I1-212ENST00000566617 WASHC2AQ641Q2 1341 aa39■■■■□ 3.83
COX4I1-212ENST00000566617 CRB1P82279 1406 aa38.99■■■■□ 3.83
COX4I1-212ENST00000566617 ZEB1P37275 1124 aaPredicted RBP38.99■■■■□ 3.83
COX4I1-212ENST00000566617 WDR17Q8IZU2 1322 aa38.98■■■■□ 3.83
COX4I1-212ENST00000566617 THRAP3Q9Y2W1 955 aaKnown RBP38.98■■■■□ 3.83
COX4I1-212ENST00000566617 ANKRD26Q9UPS8 1709 aa38.97■■■■□ 3.83
COX4I1-212ENST00000566617 BARGINQ6ZT62 677 aa38.97■■■■□ 3.83
COX4I1-212ENST00000566617 SEPT12Q8IYM1 358 aa38.97■■■■□ 3.83
COX4I1-212ENST00000566617 IP6K1Q92551 441 aa38.96■■■■□ 3.83
COX4I1-212ENST00000566617 BLMP54132 1417 aaPredicted RBP38.96■■■■□ 3.83
COX4I1-212ENST00000566617 FAM98CQ17RN3 349 aaKnown RBP38.95■■■■□ 3.83
COX4I1-212ENST00000566617 NSD2O96028 1365 aa38.95■■■■□ 3.83
COX4I1-212ENST00000566617 MAP3K19Q56UN5 1328 aa38.94■■■■□ 3.82
COX4I1-212ENST00000566617 THSD7AQ9UPZ6 1657 aa38.94■■■■□ 3.82
COX4I1-212ENST00000566617 BRWD3Q6RI45 1802 aa38.94■■■■□ 3.82
COX4I1-212ENST00000566617 TCP11L2Q8N4U5 519 aa38.93■■■■□ 3.82
COX4I1-212ENST00000566617 KNSTRNQ9Y448 316 aa38.91■■■■□ 3.82
COX4I1-212ENST00000566617 RTL1A6NKG5 1358 aa38.91■■■■□ 3.82
COX4I1-212ENST00000566617 KIF24Q5T7B8 1368 aa38.91■■■■□ 3.82
COX4I1-212ENST00000566617 TOM1L2Q6ZVM7 507 aa38.9■■■■□ 3.82
COX4I1-212ENST00000566617 ERBB3P21860 1342 aa38.89■■■■□ 3.82
COX4I1-212ENST00000566617 FBLN1P23142 703 aa38.89■■■■□ 3.82
COX4I1-212ENST00000566617 PER1O15534 1290 aaPredicted RBP38.88■■■■□ 3.81
COX4I1-212ENST00000566617 USP35Q9P2H5 1018 aa38.88■■■■□ 3.81
COX4I1-212ENST00000566617 CARD10Q9BWT7 1032 aa38.87■■■■□ 3.81
COX4I1-212ENST00000566617 HOXC9P31274 260 aa38.86■■■■□ 3.81
COX4I1-212ENST00000566617 AMPHP49418 695 aa38.86■■■■□ 3.81
COX4I1-212ENST00000566617 CSB-PGBD3P0DP91 1061 aa38.85■■■■□ 3.81
COX4I1-212ENST00000566617 RRS1Q15050 365 aaKnown RBP38.84■■■■□ 3.81
COX4I1-212ENST00000566617 ANKRD24Q8TF21 1146 aa38.83■■■■□ 3.81
COX4I1-212ENST00000566617 MAP2P11137 1827 aaKnown RBP38.83■■■■□ 3.81
COX4I1-212ENST00000566617 FAM208AQ9UK61 1670 aaKnown RBP38.83■■■■□ 3.81
COX4I1-212ENST00000566617 AMER1Q5JTC6 1135 aaPredicted RBP38.82■■■■□ 3.8
COX4I1-212ENST00000566617 KRT27Q7Z3Y8 459 aa38.82■■■■□ 3.8
COX4I1-212ENST00000566617 A0A0G2JS52 829 aa38.8■■■■□ 3.8
COX4I1-212ENST00000566617 MYT1Q01538 1121 aa38.8■■■■□ 3.8
COX4I1-212ENST00000566617 PARP4Q9UKK3 1724 aaKnown RBP38.8■■■■□ 3.8
COX4I1-212ENST00000566617 UPF1Q92900 1129 aaKnown RBP eCLIP38.79■■■■□ 3.8
COX4I1-212ENST00000566617 CDCA7Q9BWT1 371 aaPredicted RBP38.79■■■■□ 3.8
COX4I1-212ENST00000566617 WNK3Q9BYP7 1800 aa38.79■■■■□ 3.8
COX4I1-212ENST00000566617 FLT4P35916 1363 aa38.79■■■■□ 3.8
COX4I1-212ENST00000566617 PEAK1Q9H792 1746 aa38.77■■■■□ 3.8
COX4I1-212ENST00000566617 INSRP06213 1382 aa38.76■■■■□ 3.8
COX4I1-212ENST00000566617 NPC1L1Q9UHC9 1359 aa38.75■■■■□ 3.79
COX4I1-212ENST00000566617 NLRP2Q9NX02 1062 aa38.74■■■■□ 3.79
COX4I1-212ENST00000566617 POLKQ9UBT6 870 aa38.73■■■■□ 3.79
COX4I1-212ENST00000566617 MORC1Q86VD1 984 aa38.72■■■■□ 3.79
COX4I1-212ENST00000566617 EMILIN1Q9Y6C2 1016 aa38.72■■■■□ 3.79
COX4I1-212ENST00000566617 DISP2A7MBM2 1401 aa38.72■■■■□ 3.79
COX4I1-212ENST00000566617 HSP90AB2PQ58FF8 381 aa38.7■■■■□ 3.79
COX4I1-212ENST00000566617 CCDC125Q86Z20 511 aa38.69■■■■□ 3.78
COX4I1-212ENST00000566617 LTV1Q96GA3 475 aaPredicted RBP38.68■■■■□ 3.78
COX4I1-212ENST00000566617 SMG6Q86US8 1419 aaKnown RBP38.67■■■■□ 3.78
COX4I1-212ENST00000566617 LRRC37A3O60309 1634 aa38.65■■■■□ 3.78
COX4I1-212ENST00000566617 TNNT2P45379 298 aaPredicted RBP38.65■■■■□ 3.78
COX4I1-212ENST00000566617 PDE3BQ13370 1112 aa38.65■■■■□ 3.78
COX4I1-212ENST00000566617 RGPD2P0DJD1 1756 aa38.64■■■■□ 3.78
COX4I1-212ENST00000566617 DDB1Q16531 1140 aa38.63■■■■□ 3.77
COX4I1-212ENST00000566617 PPM1GO15355 546 aaPredicted RBP38.61■■■■□ 3.77
COX4I1-212ENST00000566617 IL2RBP14784 551 aa38.6■■■■□ 3.77
COX4I1-212ENST00000566617 EP400Q96L91 3159 aa38.59■■■■□ 3.77
COX4I1-212ENST00000566617 FAM196AQ6ZSG2 479 aa38.59■■■■□ 3.77
COX4I1-212ENST00000566617 NBPF6Q5VWK0 638 aa38.58■■■■□ 3.77
COX4I1-212ENST00000566617 NBPF4Q96M43 638 aa38.58■■■■□ 3.77
COX4I1-212ENST00000566617 CC2D1BQ5T0F9 858 aaKnown RBP38.57■■■■□ 3.76
COX4I1-212ENST00000566617 EXOC5O00471 708 aa38.56■■■■□ 3.76
COX4I1-212ENST00000566617 FAM182BQ5T319 152 aa38.53■■■■□ 3.76
COX4I1-212ENST00000566617 TNS2Q63HR2 1409 aa38.53■■■■□ 3.76
COX4I1-212ENST00000566617 NCAPD2Q15021 1401 aa38.52■■■■□ 3.76
COX4I1-212ENST00000566617 BCL9O00512 1426 aa38.5■■■■□ 3.75
COX4I1-212ENST00000566617 OVOS2A0A0G2JMS6 1433 aa38.49■■■■□ 3.75
COX4I1-212ENST00000566617 RGPD1P0DJD0 1748 aa38.48■■■■□ 3.75
COX4I1-212ENST00000566617 MARCH10Q8NA82 808 aaPredicted RBP38.47■■■■□ 3.75
COX4I1-212ENST00000566617 EIF4A2Q14240 407 aaKnown RBP38.46■■■■□ 3.75
COX4I1-212ENST00000566617 EYA1Q99502 592 aa38.44■■■■□ 3.74
COX4I1-212ENST00000566617 MTHFSP49914 203 aa38.43■■■■□ 3.74
COX4I1-212ENST00000566617 SF3B2Q13435 895 aaKnown RBP38.43■■■■□ 3.74
COX4I1-212ENST00000566617 RAPGEF4Q8WZA2 1011 aa38.42■■■■□ 3.74
COX4I1-212ENST00000566617 SBF2Q86WG5 1849 aa38.42■■■■□ 3.74
COX4I1-212ENST00000566617 MEGF6O75095 1541 aa38.42■■■■□ 3.74
COX4I1-212ENST00000566617 USHBP1Q8N6Y0 703 aa38.41■■■■□ 3.74
COX4I1-212ENST00000566617 TNS1Q9HBL0 1735 aaKnown RBP38.39■■■■□ 3.74
COX4I1-212ENST00000566617 TATP17735 454 aaPredicted RBP38.37■■■■□ 3.73
COX4I1-212ENST00000566617 ZCRB1Q8TBF4 217 aaKnown RBP38.37■■■■□ 3.73
COX4I1-212ENST00000566617 IGSF1Q8N6C5 1336 aa38.37■■■■□ 3.73
COX4I1-212ENST00000566617 PLEKHG2Q9H7P9 1386 aa38.36■■■■□ 3.73
COX4I1-212ENST00000566617 TRIM37O94972 964 aa38.36■■■■□ 3.73
COX4I1-212ENST00000566617 SHANK3Q9BYB0 1731 aa38.35■■■■□ 3.73
COX4I1-212ENST00000566617 DDX10Q13206 875 aaKnown RBP38.34■■■■□ 3.73
COX4I1-212ENST00000566617 IL13P35225 146 aa38.33■■■■□ 3.73
COX4I1-212ENST00000566617 BAG6P46379 1132 aa38.32■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms