RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 GJD4Q96KN9 370 aaPredicted RBP28.97■■■□□ 2.23
SHCBP1-205ENST00000566016 KNSTRNQ9Y448 316 aa28.93■■■□□ 2.22
SHCBP1-205ENST00000566016 RGS12O14924 1447 aa28.92■■■□□ 2.22
SHCBP1-205ENST00000566016 SPATA31A5Q5VU36 1347 aa28.91■■■□□ 2.22
SHCBP1-205ENST00000566016 SPATA31A7Q8IWB4 1347 aa28.91■■■□□ 2.22
SHCBP1-205ENST00000566016 BLMP54132 1417 aaPredicted RBP28.91■■■□□ 2.22
SHCBP1-205ENST00000566016 ZBTB7CA1YPR0 619 aa28.91■■■□□ 2.22
SHCBP1-205ENST00000566016 RTL1A6NKG5 1358 aa28.9■■■□□ 2.22
SHCBP1-205ENST00000566016 PER1O15534 1290 aaPredicted RBP28.9■■■□□ 2.22
SHCBP1-205ENST00000566016 AXIN2Q9Y2T1 843 aa28.9■■■□□ 2.22
SHCBP1-205ENST00000566016 MAP2P11137 1827 aaKnown RBP28.9■■■□□ 2.22
SHCBP1-205ENST00000566016 STRN4Q9NRL3 753 aa28.89■■■□□ 2.22
SHCBP1-205ENST00000566016 MAP3K19Q56UN5 1328 aa28.89■■■□□ 2.22
SHCBP1-205ENST00000566016 KIF24Q5T7B8 1368 aa28.89■■■□□ 2.21
SHCBP1-205ENST00000566016 FAM208AQ9UK61 1670 aaKnown RBP28.89■■■□□ 2.21
SHCBP1-205ENST00000566016 EVA1CP58658 441 aa28.88■■■□□ 2.21
SHCBP1-205ENST00000566016 CRB1P82279 1406 aa28.88■■■□□ 2.21
SHCBP1-205ENST00000566016 AMER1Q5JTC6 1135 aaPredicted RBP28.87■■■□□ 2.21
SHCBP1-205ENST00000566016 CCDC9Q9Y3X0 531 aaKnown RBP28.87■■■□□ 2.21
SHCBP1-205ENST00000566016 NPC1L1Q9UHC9 1359 aa28.86■■■□□ 2.21
SHCBP1-205ENST00000566016 SPATA31A1Q5TZJ5 1347 aa28.86■■■□□ 2.21
SHCBP1-205ENST00000566016 WDR17Q8IZU2 1322 aa28.86■■■□□ 2.21
SHCBP1-205ENST00000566016 IP6K1Q92551 441 aa28.85■■■□□ 2.21
SHCBP1-205ENST00000566016 THSD7AQ9UPZ6 1657 aa28.85■■■□□ 2.21
SHCBP1-205ENST00000566016 PEAK1Q9H792 1746 aa28.85■■■□□ 2.21
SHCBP1-205ENST00000566016 ONECUT3O60422 494 aaPredicted RBP28.85■■■□□ 2.21
SHCBP1-205ENST00000566016 LARP1Q6PKG0 1096 aaKnown RBP28.85■■■□□ 2.21
SHCBP1-205ENST00000566016 ERBB3P21860 1342 aa28.84■■■□□ 2.21
SHCBP1-205ENST00000566016 WNK3Q9BYP7 1800 aa28.83■■■□□ 2.21
SHCBP1-205ENST00000566016 BRWD3Q6RI45 1802 aa28.81■■■□□ 2.2
SHCBP1-205ENST00000566016 FBLN1P23142 703 aa28.81■■■□□ 2.2
SHCBP1-205ENST00000566016 RRS1Q15050 365 aaKnown RBP28.81■■■□□ 2.2
SHCBP1-205ENST00000566016 FLT4P35916 1363 aa28.81■■■□□ 2.2
SHCBP1-205ENST00000566016 HOXC9P31274 260 aa28.8■■■□□ 2.2
SHCBP1-205ENST00000566016 AMPHP49418 695 aa28.8■■■□□ 2.2
SHCBP1-205ENST00000566016 THRAP3Q9Y2W1 955 aaKnown RBP28.8■■■□□ 2.2
SHCBP1-205ENST00000566016 BARGINQ6ZT62 677 aa28.78■■■□□ 2.2
SHCBP1-205ENST00000566016 SMG6Q86US8 1419 aaKnown RBP28.78■■■□□ 2.2
SHCBP1-205ENST00000566016 TCP11L2Q8N4U5 519 aa28.78■■■□□ 2.2
SHCBP1-205ENST00000566016 PARP4Q9UKK3 1724 aaKnown RBP28.77■■■□□ 2.2
SHCBP1-205ENST00000566016 TOM1L2Q6ZVM7 507 aa28.77■■■□□ 2.2
SHCBP1-205ENST00000566016 EP400Q96L91 3159 aa28.76■■■□□ 2.19
SHCBP1-205ENST00000566016 INSRP06213 1382 aa28.76■■■□□ 2.19
SHCBP1-205ENST00000566016 FAM98CQ17RN3 349 aaKnown RBP28.76■■■□□ 2.19
SHCBP1-205ENST00000566016 MORC1Q86VD1 984 aa28.76■■■□□ 2.19
SHCBP1-205ENST00000566016 CARD10Q9BWT7 1032 aa28.76■■■□□ 2.19
SHCBP1-205ENST00000566016 CSB-PGBD3P0DP91 1061 aa28.75■■■□□ 2.19
SHCBP1-205ENST00000566016 ANKRD24Q8TF21 1146 aa28.75■■■□□ 2.19
SHCBP1-205ENST00000566016 SEPT12Q8IYM1 358 aa28.73■■■□□ 2.19
SHCBP1-205ENST00000566016 USP35Q9P2H5 1018 aa28.73■■■□□ 2.19
SHCBP1-205ENST00000566016 POLKQ9UBT6 870 aa28.73■■■□□ 2.19
SHCBP1-205ENST00000566016 EMILIN1Q9Y6C2 1016 aa28.73■■■□□ 2.19
SHCBP1-205ENST00000566016 RGPD2P0DJD1 1756 aa28.72■■■□□ 2.19
SHCBP1-205ENST00000566016 SOCS7O14512 581 aa28.7■■■□□ 2.18
SHCBP1-205ENST00000566016 TNNT2P45379 298 aaPredicted RBP28.7■■■□□ 2.18
SHCBP1-205ENST00000566016 LRRC37A3O60309 1634 aa28.69■■■□□ 2.18
SHCBP1-205ENST00000566016 DISP2A7MBM2 1401 aa28.69■■■□□ 2.18
SHCBP1-205ENST00000566016 HSP90AB2PQ58FF8 381 aa28.68■■■□□ 2.18
SHCBP1-205ENST00000566016 CC2D1BQ5T0F9 858 aaKnown RBP28.67■■■□□ 2.18
SHCBP1-205ENST00000566016 CDCA7Q9BWT1 371 aaPredicted RBP28.67■■■□□ 2.18
SHCBP1-205ENST00000566016 A0A0G2JS52 829 aa28.66■■■□□ 2.18
SHCBP1-205ENST00000566016 MYT1Q01538 1121 aa28.66■■■□□ 2.18
SHCBP1-205ENST00000566016 NLRP2Q9NX02 1062 aa28.66■■■□□ 2.18
SHCBP1-205ENST00000566016 PPM1GO15355 546 aaPredicted RBP28.65■■■□□ 2.18
SHCBP1-205ENST00000566016 LTV1Q96GA3 475 aaPredicted RBP28.64■■■□□ 2.17
SHCBP1-205ENST00000566016 KRT27Q7Z3Y8 459 aa28.62■■■□□ 2.17
SHCBP1-205ENST00000566016 NCAPD2Q15021 1401 aa28.62■■■□□ 2.17
SHCBP1-205ENST00000566016 DDX10Q13206 875 aaKnown RBP28.59■■■□□ 2.17
SHCBP1-205ENST00000566016 TNS2Q63HR2 1409 aa28.58■■■□□ 2.17
SHCBP1-205ENST00000566016 IL2RBP14784 551 aa28.57■■■□□ 2.16
SHCBP1-205ENST00000566016 NBPF6Q5VWK0 638 aa28.57■■■□□ 2.16
SHCBP1-205ENST00000566016 NBPF4Q96M43 638 aa28.57■■■□□ 2.16
SHCBP1-205ENST00000566016 ZNF316A6NFI3 1004 aaPredicted RBP28.56■■■□□ 2.16
SHCBP1-205ENST00000566016 RGPD1P0DJD0 1748 aa28.55■■■□□ 2.16
SHCBP1-205ENST00000566016 PARD3Q8TEW0 1356 aa28.54■■■□□ 2.16
SHCBP1-205ENST00000566016 EIF4A2Q14240 407 aaKnown RBP28.54■■■□□ 2.16
SHCBP1-205ENST00000566016 DDB1Q16531 1140 aa28.54■■■□□ 2.16
SHCBP1-205ENST00000566016 MTHFSP49914 203 aa28.53■■■□□ 2.16
SHCBP1-205ENST00000566016 PDE3BQ13370 1112 aa28.53■■■□□ 2.16
SHCBP1-205ENST00000566016 MEGF6O75095 1541 aa28.52■■■□□ 2.16
SHCBP1-205ENST00000566016 OVOS2A0A0G2JMS6 1433 aa28.51■■■□□ 2.15
SHCBP1-205ENST00000566016 SHANK3Q9BYB0 1731 aa28.51■■■□□ 2.15
SHCBP1-205ENST00000566016 UPF1Q92900 1129 aaKnown RBP eCLIP28.5■■■□□ 2.15
SHCBP1-205ENST00000566016 PLEKHG2Q9H7P9 1386 aa28.49■■■□□ 2.15
SHCBP1-205ENST00000566016 CNGB1Q14028 1251 aaPredicted RBP28.49■■■□□ 2.15
SHCBP1-205ENST00000566016 EYA1Q99502 592 aa28.49■■■□□ 2.15
SHCBP1-205ENST00000566016 COL3A1P02461 1466 aaPredicted RBP28.49■■■□□ 2.15
SHCBP1-205ENST00000566016 PKD1L3Q7Z443 1732 aa28.49■■■□□ 2.15
SHCBP1-205ENST00000566016 IGSF1Q8N6C5 1336 aa28.49■■■□□ 2.15
SHCBP1-205ENST00000566016 BCL9O00512 1426 aa28.48■■■□□ 2.15
SHCBP1-205ENST00000566016 EXOC5O00471 708 aa28.48■■■□□ 2.15
SHCBP1-205ENST00000566016 SBF2Q86WG5 1849 aa28.47■■■□□ 2.15
SHCBP1-205ENST00000566016 FAM196AQ6ZSG2 479 aa28.46■■■□□ 2.15
SHCBP1-205ENST00000566016 USHBP1Q8N6Y0 703 aa28.46■■■□□ 2.15
SHCBP1-205ENST00000566016 RAPGEF4Q8WZA2 1011 aa28.46■■■□□ 2.15
SHCBP1-205ENST00000566016 PPP2R1AP30153 589 aa28.45■■■□□ 2.14
SHCBP1-205ENST00000566016 CCDC125Q86Z20 511 aa28.45■■■□□ 2.14
SHCBP1-205ENST00000566016 IL13P35225 146 aa28.44■■■□□ 2.14
SHCBP1-205ENST00000566016 TNS1Q9HBL0 1735 aaKnown RBP28.43■■■□□ 2.14
SHCBP1-205ENST00000566016 KDRP35968 1356 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms