RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
CNOT1-208ENST00000565697 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
CNOT1-208ENST00000565697 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
CNOT1-208ENST00000565697 SSH2Q76I76 1423 aa13.89□□□□□ -0.19
CNOT1-208ENST00000565697 AKAP12Q02952 1782 aa13.88□□□□□ -0.19
CNOT1-208ENST00000565697 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
CNOT1-208ENST00000565697 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
CNOT1-208ENST00000565697 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
CNOT1-208ENST00000565697 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
CNOT1-208ENST00000565697 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
CNOT1-208ENST00000565697 TTC21BQ7Z4L5 1316 aa13.88□□□□□ -0.19
CNOT1-208ENST00000565697 GCP02774 474 aa13.87□□□□□ -0.19
CNOT1-208ENST00000565697 CPDO75976 1380 aa13.86□□□□□ -0.19
CNOT1-208ENST00000565697 KCNH5Q8NCM2 988 aa13.86□□□□□ -0.19
CNOT1-208ENST00000565697 NRAPQ86VF7 1730 aa13.85□□□□□ -0.19
CNOT1-208ENST00000565697 GLI3P10071 1580 aa13.85□□□□□ -0.19
CNOT1-208ENST00000565697 NRKQ7Z2Y5 1582 aa13.85□□□□□ -0.19
CNOT1-208ENST00000565697 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
CNOT1-208ENST00000565697 SLC12A5Q9H2X9 1139 aa13.85□□□□□ -0.19
CNOT1-208ENST00000565697 ONECUT3O60422 494 aaPredicted RBP13.84□□□□□ -0.19
CNOT1-208ENST00000565697 EVA1CP58658 441 aa13.84□□□□□ -0.19
CNOT1-208ENST00000565697 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
CNOT1-208ENST00000565697 MON2Q7Z3U7 1717 aa13.84□□□□□ -0.19
CNOT1-208ENST00000565697 PIK3C2AO00443 1686 aa13.83□□□□□ -0.2
CNOT1-208ENST00000565697 SLIT3O75094 1523 aa13.83□□□□□ -0.2
CNOT1-208ENST00000565697 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
CNOT1-208ENST00000565697 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
CNOT1-208ENST00000565697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
CNOT1-208ENST00000565697 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
CNOT1-208ENST00000565697 STRN4Q9NRL3 753 aa13.82□□□□□ -0.2
CNOT1-208ENST00000565697 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
CNOT1-208ENST00000565697 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
CNOT1-208ENST00000565697 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
CNOT1-208ENST00000565697 A0A0G2JS52 829 aa13.81□□□□□ -0.2
CNOT1-208ENST00000565697 MYT1Q01538 1121 aa13.81□□□□□ -0.2
CNOT1-208ENST00000565697 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
CNOT1-208ENST00000565697 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
CNOT1-208ENST00000565697 ZBTB7CA1YPR0 619 aa13.8□□□□□ -0.2
CNOT1-208ENST00000565697 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
CNOT1-208ENST00000565697 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
CNOT1-208ENST00000565697 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-208ENST00000565697 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
CNOT1-208ENST00000565697 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
CNOT1-208ENST00000565697 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
CNOT1-208ENST00000565697 SPATA31A1Q5TZJ5 1347 aa13.79□□□□□ -0.2
CNOT1-208ENST00000565697 ANKRD36BQ8N2N9 1353 aa13.79□□□□□ -0.2
CNOT1-208ENST00000565697 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
CNOT1-208ENST00000565697 ARHGEF25Q86VW2 580 aa13.78□□□□□ -0.2
CNOT1-208ENST00000565697 NME9Q86XW9 330 aa13.78□□□□□ -0.2
CNOT1-208ENST00000565697 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
CNOT1-208ENST00000565697 SOX12O15370 315 aa13.77□□□□□ -0.21
CNOT1-208ENST00000565697 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
CNOT1-208ENST00000565697 USP54Q70EL1 1684 aa13.77□□□□□ -0.21
CNOT1-208ENST00000565697 THRAP3Q9Y2W1 955 aaKnown RBP13.77□□□□□ -0.21
CNOT1-208ENST00000565697 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-208ENST00000565697 LARP1Q6PKG0 1096 aaKnown RBP13.76□□□□□ -0.21
CNOT1-208ENST00000565697 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
CNOT1-208ENST00000565697 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
CNOT1-208ENST00000565697 COG3Q96JB2 828 aa13.75□□□□□ -0.21
CNOT1-208ENST00000565697 BRWD3Q6RI45 1802 aa13.75□□□□□ -0.21
CNOT1-208ENST00000565697 ABCC6O95255 1503 aa13.74□□□□□ -0.21
CNOT1-208ENST00000565697 CRB1P82279 1406 aa13.74□□□□□ -0.21
CNOT1-208ENST00000565697 HSPA5P11021 654 aaKnown RBP13.74□□□□□ -0.21
CNOT1-208ENST00000565697 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
CNOT1-208ENST00000565697 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
CNOT1-208ENST00000565697 NFAT5O94916 1531 aa13.74□□□□□ -0.21
CNOT1-208ENST00000565697 CSB-PGBD3P0DP91 1061 aa13.73□□□□□ -0.21
CNOT1-208ENST00000565697 SF3B2Q13435 895 aaKnown RBP13.73□□□□□ -0.21
CNOT1-208ENST00000565697 COL18A1P39060 1754 aa13.73□□□□□ -0.21
CNOT1-208ENST00000565697 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
CNOT1-208ENST00000565697 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
CNOT1-208ENST00000565697 THSD7AQ9UPZ6 1657 aa13.72□□□□□ -0.21
CNOT1-208ENST00000565697 WDR17Q8IZU2 1322 aa13.72□□□□□ -0.21
CNOT1-208ENST00000565697 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
CNOT1-208ENST00000565697 BLMP54132 1417 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-208ENST00000565697 PDE3BQ13370 1112 aa13.71□□□□□ -0.21
CNOT1-208ENST00000565697 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-208ENST00000565697 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
CNOT1-208ENST00000565697 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-208ENST00000565697 FYB1O15117 783 aa13.69□□□□□ -0.22
CNOT1-208ENST00000565697 FAM196AQ6ZSG2 479 aa13.69□□□□□ -0.22
CNOT1-208ENST00000565697 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
CNOT1-208ENST00000565697 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
CNOT1-208ENST00000565697 LTN1O94822 1766 aa13.68□□□□□ -0.22
CNOT1-208ENST00000565697 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
CNOT1-208ENST00000565697 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
CNOT1-208ENST00000565697 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
CNOT1-208ENST00000565697 MYOM1P52179 1685 aa13.67□□□□□ -0.22
CNOT1-208ENST00000565697 IP6K1Q92551 441 aa13.67□□□□□ -0.22
CNOT1-208ENST00000565697 ERBB3P21860 1342 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 BAG6P46379 1132 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 AMPHP49418 695 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 DDB1Q16531 1140 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
CNOT1-208ENST00000565697 KIF20BQ96Q89 1820 aa13.66□□□□□ -0.22
CNOT1-208ENST00000565697 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
CNOT1-208ENST00000565697 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.22
CNOT1-208ENST00000565697 RTL1A6NKG5 1358 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms