RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-215ENST00000565559 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
CAPN3-215ENST00000565559 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
CAPN3-215ENST00000565559 GPR162Q16538 588 aa16.62■□□□□ 0.25
CAPN3-215ENST00000565559 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
CAPN3-215ENST00000565559 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
CAPN3-215ENST00000565559 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
CAPN3-215ENST00000565559 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
CAPN3-215ENST00000565559 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
CAPN3-215ENST00000565559 ATP7BP35670 1465 aa16.6■□□□□ 0.25
CAPN3-215ENST00000565559 ARXQ96QS3 562 aa16.59■□□□□ 0.25
CAPN3-215ENST00000565559 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
CAPN3-215ENST00000565559 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
CAPN3-215ENST00000565559 MINK1Q8N4C8 1332 aaPredicted RBP16.58■□□□□ 0.24
CAPN3-215ENST00000565559 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
CAPN3-215ENST00000565559 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
CAPN3-215ENST00000565559 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
CAPN3-215ENST00000565559 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
CAPN3-215ENST00000565559 DDB1Q16531 1140 aa16.57■□□□□ 0.24
CAPN3-215ENST00000565559 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
CAPN3-215ENST00000565559 PROM2Q8N271 834 aa16.56■□□□□ 0.24
CAPN3-215ENST00000565559 SGIP1Q9BQI5 828 aa16.56■□□□□ 0.24
CAPN3-215ENST00000565559 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
CAPN3-215ENST00000565559 CPDO75976 1380 aa16.55■□□□□ 0.24
CAPN3-215ENST00000565559 TXNRD1Q16881 649 aa16.55■□□□□ 0.24
CAPN3-215ENST00000565559 CRB1P82279 1406 aa16.53■□□□□ 0.24
CAPN3-215ENST00000565559 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
CAPN3-215ENST00000565559 TRAK1Q9UPV9 953 aa16.53■□□□□ 0.24
CAPN3-215ENST00000565559 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
CAPN3-215ENST00000565559 PTF1AQ7RTS3 328 aa16.52■□□□□ 0.24
CAPN3-215ENST00000565559 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
CAPN3-215ENST00000565559 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
CAPN3-215ENST00000565559 COL5A2P05997 1499 aaPredicted RBP16.51■□□□□ 0.23
CAPN3-215ENST00000565559 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
CAPN3-215ENST00000565559 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
CAPN3-215ENST00000565559 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
CAPN3-215ENST00000565559 BCL9O00512 1426 aa16.49■□□□□ 0.23
CAPN3-215ENST00000565559 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
CAPN3-215ENST00000565559 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
CAPN3-215ENST00000565559 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
CAPN3-215ENST00000565559 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
CAPN3-215ENST00000565559 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
CAPN3-215ENST00000565559 USP19O94966 1318 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 GCP02774 474 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 HSPA6P17066 643 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 POLD1P28340 1107 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
CAPN3-215ENST00000565559 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-215ENST00000565559 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
CAPN3-215ENST00000565559 GRIN3BO60391 1043 aa16.46■□□□□ 0.23
CAPN3-215ENST00000565559 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
CAPN3-215ENST00000565559 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
CAPN3-215ENST00000565559 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-215ENST00000565559 ACEP12821 1306 aa16.45■□□□□ 0.22
CAPN3-215ENST00000565559 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
CAPN3-215ENST00000565559 GPBP1L1Q9HC44 474 aaPredicted RBP16.43■□□□□ 0.22
CAPN3-215ENST00000565559 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
CAPN3-215ENST00000565559 SLC16A10Q8TF71 515 aa16.41■□□□□ 0.22
CAPN3-215ENST00000565559 ATP10DQ9P241 1426 aa16.41■□□□□ 0.22
CAPN3-215ENST00000565559 EXOC5O00471 708 aa16.4■□□□□ 0.22
CAPN3-215ENST00000565559 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
CAPN3-215ENST00000565559 WDR17Q8IZU2 1322 aa16.4■□□□□ 0.22
CAPN3-215ENST00000565559 PLEKHG3A1L390 1219 aa16.39■□□□□ 0.21
CAPN3-215ENST00000565559 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
CAPN3-215ENST00000565559 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
CAPN3-215ENST00000565559 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
CAPN3-215ENST00000565559 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
CAPN3-215ENST00000565559 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
CAPN3-215ENST00000565559 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
CAPN3-215ENST00000565559 BRD4O60885 1362 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-215ENST00000565559 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
CAPN3-215ENST00000565559 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
CAPN3-215ENST00000565559 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
CAPN3-215ENST00000565559 NLRP6P59044 892 aa16.34■□□□□ 0.21
CAPN3-215ENST00000565559 ACSBG1Q96GR2 724 aa16.34■□□□□ 0.21
CAPN3-215ENST00000565559 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
CAPN3-215ENST00000565559 ZNF526Q8TF50 670 aaPredicted RBP16.33■□□□□ 0.2
CAPN3-215ENST00000565559 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.2
CAPN3-215ENST00000565559 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
CAPN3-215ENST00000565559 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
CAPN3-215ENST00000565559 APLP1P51693 650 aa16.31■□□□□ 0.2
CAPN3-215ENST00000565559 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
CAPN3-215ENST00000565559 KDM2AQ9Y2K7 1162 aa16.31■□□□□ 0.2
CAPN3-215ENST00000565559 AXIN2Q9Y2T1 843 aa16.31■□□□□ 0.2
CAPN3-215ENST00000565559 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
CAPN3-215ENST00000565559 USP6P35125 1406 aa16.3■□□□□ 0.2
CAPN3-215ENST00000565559 SLIT3O75094 1523 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
CAPN3-215ENST00000565559 PPIP5K1Q6PFW1 1433 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 PNPLA7Q6ZV29 1317 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 SLC27A3Q5K4L6 730 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 DCAF11Q8TEB1 546 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
CAPN3-215ENST00000565559 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
CAPN3-215ENST00000565559 ARHGEF28Q8N1W1 1705 aaKnown RBP16.28■□□□□ 0.2
CAPN3-215ENST00000565559 ADCY9O60503 1353 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms