RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 ARMC2Q8NEN0 867 aa11.42□□□□□ -0.58
CHD9-214ENST00000565119 MAGEB6P1A0A0J9YX57 407 aa11.41□□□□□ -0.58
CHD9-214ENST00000565119 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
CHD9-214ENST00000565119 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
CHD9-214ENST00000565119 PPP1R26Q5T8A7 1209 aaPredicted RBP11.41□□□□□ -0.58
CHD9-214ENST00000565119 KANK3Q6NY19 840 aa11.41□□□□□ -0.58
CHD9-214ENST00000565119 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHD9-214ENST00000565119 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
CHD9-214ENST00000565119 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
CHD9-214ENST00000565119 CDC14CA4D256 554 aa11.39□□□□□ -0.59
CHD9-214ENST00000565119 FOXK2Q01167 660 aa11.39□□□□□ -0.59
CHD9-214ENST00000565119 NBPF14Q5TI25 921 aa11.39□□□□□ -0.59
CHD9-214ENST00000565119 SV2AQ7L0J3 742 aa11.39□□□□□ -0.59
CHD9-214ENST00000565119 TSC1Q92574 1164 aa11.39□□□□□ -0.59
CHD9-214ENST00000565119 CARD14Q9BXL6 1004 aa11.37□□□□□ -0.59
CHD9-214ENST00000565119 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
CHD9-214ENST00000565119 CTSOP43234 321 aaPredicted RBP11.36□□□□□ -0.59
CHD9-214ENST00000565119 QPCTQ16769 361 aa11.36□□□□□ -0.59
CHD9-214ENST00000565119 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
CHD9-214ENST00000565119 XP32Q5T750 250 aa11.36□□□□□ -0.59
CHD9-214ENST00000565119 LYPD4Q6UWN0 246 aa11.36□□□□□ -0.59
CHD9-214ENST00000565119 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
CHD9-214ENST00000565119 SCARF2Q96GP6 870 aaPredicted RBP11.36□□□□□ -0.59
CHD9-214ENST00000565119 ZMYND10O75800 440 aa11.35□□□□□ -0.59
CHD9-214ENST00000565119 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
CHD9-214ENST00000565119 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
CHD9-214ENST00000565119 LIMD1Q9UGP4 676 aa11.34□□□□□ -0.59
CHD9-214ENST00000565119 INSM2Q96T92 566 aaPredicted RBP11.33□□□□□ -0.6
CHD9-214ENST00000565119 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
CHD9-214ENST00000565119 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
CHD9-214ENST00000565119 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
CHD9-214ENST00000565119 LILRB3O75022 631 aa11.31□□□□□ -0.6
CHD9-214ENST00000565119 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
CHD9-214ENST00000565119 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
CHD9-214ENST00000565119 RELBQ01201 579 aa11.3□□□□□ -0.6
CHD9-214ENST00000565119 CELA2BP08218 269 aaPredicted RBP11.29□□□□□ -0.6
CHD9-214ENST00000565119 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
CHD9-214ENST00000565119 KCTD15Q96SI1 283 aaPredicted RBP11.29□□□□□ -0.6
CHD9-214ENST00000565119 SRSF11Q05519 484 aaKnown RBP11.28□□□□□ -0.6
CHD9-214ENST00000565119 GAS6Q14393 721 aa11.28□□□□□ -0.6
CHD9-214ENST00000565119 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
CHD9-214ENST00000565119 MYSM1Q5VVJ2 828 aa11.28□□□□□ -0.6
CHD9-214ENST00000565119 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.6
CHD9-214ENST00000565119 ADAM23O75077 832 aa11.27□□□□□ -0.61
CHD9-214ENST00000565119 ITGB2P05107 769 aa11.27□□□□□ -0.61
CHD9-214ENST00000565119 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
CHD9-214ENST00000565119 PLA2G4EQ3MJ16 856 aa11.27□□□□□ -0.61
CHD9-214ENST00000565119 POLMQ9NP87 494 aaPredicted RBP11.27□□□□□ -0.61
CHD9-214ENST00000565119 TUSC1Q2TAM9 212 aa11.26□□□□□ -0.61
CHD9-214ENST00000565119 CUEDC1Q9NWM3 386 aaPredicted RBP11.26□□□□□ -0.61
CHD9-214ENST00000565119 MSTNO14793 375 aa11.25□□□□□ -0.61
CHD9-214ENST00000565119 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
CHD9-214ENST00000565119 ZNF395Q9H8N7 513 aaPredicted RBP11.25□□□□□ -0.61
CHD9-214ENST00000565119 DHX9Q08211 1270 aaKnown RBP11.24□□□□□ -0.61
CHD9-214ENST00000565119 INTS6LQ5JSJ4 861 aaKnown RBP11.24□□□□□ -0.61
CHD9-214ENST00000565119 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
CHD9-214ENST00000565119 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
CHD9-214ENST00000565119 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
CHD9-214ENST00000565119 ARHGAP9Q9BRR9 750 aa11.24□□□□□ -0.61
CHD9-214ENST00000565119 TRIM66O15016 1216 aa11.23□□□□□ -0.61
CHD9-214ENST00000565119 SLC10A4Q96EP9 437 aa11.23□□□□□ -0.61
CHD9-214ENST00000565119 CNTNAP5Q8WYK1 1306 aa11.23□□□□□ -0.61
CHD9-214ENST00000565119 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
CHD9-214ENST00000565119 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
CHD9-214ENST00000565119 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.61
CHD9-214ENST00000565119 ENAMQ9NRM1 1142 aa11.19□□□□□ -0.62
CHD9-214ENST00000565119 TMPRSS4Q9NRS4 437 aa11.19□□□□□ -0.62
CHD9-214ENST00000565119 PROCP04070 461 aa11.18□□□□□ -0.62
CHD9-214ENST00000565119 KDF1Q8NAX2 398 aaPredicted RBP11.18□□□□□ -0.62
CHD9-214ENST00000565119 PHF20L1A8MW92 1017 aa11.17□□□□□ -0.62
CHD9-214ENST00000565119 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
CHD9-214ENST00000565119 OCSTAMPQ9BR26 566 aa11.17□□□□□ -0.62
CHD9-214ENST00000565119 FKBPLQ9UIM3 349 aa11.17□□□□□ -0.62
CHD9-214ENST00000565119 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
CHD9-214ENST00000565119 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
CHD9-214ENST00000565119 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
CHD9-214ENST00000565119 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
CHD9-214ENST00000565119 ADH1AP07327 375 aa11.15□□□□□ -0.62
CHD9-214ENST00000565119 LILRA1O75019 489 aa11.14□□□□□ -0.63
CHD9-214ENST00000565119 LYSMD3Q7Z3D4 306 aa11.14□□□□□ -0.63
CHD9-214ENST00000565119 BEND7Q8N7W2 519 aaPredicted RBP11.14□□□□□ -0.63
CHD9-214ENST00000565119 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
CHD9-214ENST00000565119 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
CHD9-214ENST00000565119 IGF1RP08069 1367 aa11.14□□□□□ -0.63
CHD9-214ENST00000565119 GPR25O00155 361 aa11.13□□□□□ -0.63
CHD9-214ENST00000565119 PTGIRP43119 386 aa11.13□□□□□ -0.63
CHD9-214ENST00000565119 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
CHD9-214ENST00000565119 CLK2P49760 499 aaKnown RBP11.12□□□□□ -0.63
CHD9-214ENST00000565119 KRTAP4-8Q9BYQ9 185 aa11.12□□□□□ -0.63
CHD9-214ENST00000565119 BCRP11274 1271 aa11.11□□□□□ -0.63
CHD9-214ENST00000565119 RHOQP17081 205 aa11.11□□□□□ -0.63
CHD9-214ENST00000565119 RAB15P59190 212 aa11.11□□□□□ -0.63
CHD9-214ENST00000565119 AK7Q96M32 723 aa11.11□□□□□ -0.63
CHD9-214ENST00000565119 PRICKLE2Q7Z3G6 844 aa11.1□□□□□ -0.63
CHD9-214ENST00000565119 TRIM22Q8IYM9 498 aa11.1□□□□□ -0.63
CHD9-214ENST00000565119 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
CHD9-214ENST00000565119 ADAM32Q8TC27 787 aa11.1□□□□□ -0.63
CHD9-214ENST00000565119 ACDQ96AP0 544 aa11.1□□□□□ -0.63
CHD9-214ENST00000565119 NR6A1Q15406 480 aa11.09□□□□□ -0.63
CHD9-214ENST00000565119 DBN1Q16643 649 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms