RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 MTHFSP49914 203 aa16.78■□□□□ 0.28
NSMCE1-208ENST00000565070 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
NSMCE1-208ENST00000565070 RRS1Q15050 365 aaKnown RBP16.77■□□□□ 0.27
NSMCE1-208ENST00000565070 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.27
NSMCE1-208ENST00000565070 FLT4P35916 1363 aa16.77■□□□□ 0.27
NSMCE1-208ENST00000565070 COL3A1P02461 1466 aaPredicted RBP16.76■□□□□ 0.27
NSMCE1-208ENST00000565070 AMPHP49418 695 aa16.76■□□□□ 0.27
NSMCE1-208ENST00000565070 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
NSMCE1-208ENST00000565070 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
NSMCE1-208ENST00000565070 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
NSMCE1-208ENST00000565070 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
NSMCE1-208ENST00000565070 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
NSMCE1-208ENST00000565070 FBLN1P23142 703 aa16.75■□□□□ 0.27
NSMCE1-208ENST00000565070 PEAK1Q9H792 1746 aa16.74■□□□□ 0.27
NSMCE1-208ENST00000565070 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
NSMCE1-208ENST00000565070 PRDM11Q9NQV5 511 aa16.73■□□□□ 0.27
NSMCE1-208ENST00000565070 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
NSMCE1-208ENST00000565070 IP6K1Q92551 441 aa16.73■□□□□ 0.27
NSMCE1-208ENST00000565070 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
NSMCE1-208ENST00000565070 ZBTB7CA1YPR0 619 aa16.71■□□□□ 0.27
NSMCE1-208ENST00000565070 HOXC9P31274 260 aa16.71■□□□□ 0.27
NSMCE1-208ENST00000565070 COL18A1P39060 1754 aa16.71■□□□□ 0.27
NSMCE1-208ENST00000565070 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
NSMCE1-208ENST00000565070 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
NSMCE1-208ENST00000565070 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
NSMCE1-208ENST00000565070 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
NSMCE1-208ENST00000565070 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
NSMCE1-208ENST00000565070 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
NSMCE1-208ENST00000565070 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
NSMCE1-208ENST00000565070 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
NSMCE1-208ENST00000565070 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
NSMCE1-208ENST00000565070 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
NSMCE1-208ENST00000565070 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
NSMCE1-208ENST00000565070 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
NSMCE1-208ENST00000565070 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
NSMCE1-208ENST00000565070 NWD2Q9ULI1 1742 aa16.66■□□□□ 0.26
NSMCE1-208ENST00000565070 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
NSMCE1-208ENST00000565070 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
NSMCE1-208ENST00000565070 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
NSMCE1-208ENST00000565070 LRP6O75581 1613 aa16.65■□□□□ 0.26
NSMCE1-208ENST00000565070 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
NSMCE1-208ENST00000565070 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
NSMCE1-208ENST00000565070 CAMTA1Q9Y6Y1 1673 aa16.64■□□□□ 0.25
NSMCE1-208ENST00000565070 ERBB3P21860 1342 aa16.64■□□□□ 0.25
NSMCE1-208ENST00000565070 IL13P35225 146 aa16.64■□□□□ 0.25
NSMCE1-208ENST00000565070 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
NSMCE1-208ENST00000565070 NGEFQ8N5V2 710 aa16.64■□□□□ 0.25
NSMCE1-208ENST00000565070 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
NSMCE1-208ENST00000565070 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
NSMCE1-208ENST00000565070 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
NSMCE1-208ENST00000565070 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
NSMCE1-208ENST00000565070 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
NSMCE1-208ENST00000565070 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 EVA1CP58658 441 aa16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 SLIT2O94813 1529 aa16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
NSMCE1-208ENST00000565070 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 APAF1O14727 1248 aa16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 C8orf37Q96NL8 207 aa16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
NSMCE1-208ENST00000565070 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
NSMCE1-208ENST00000565070 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.59■□□□□ 0.25
NSMCE1-208ENST00000565070 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
NSMCE1-208ENST00000565070 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
NSMCE1-208ENST00000565070 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.24
NSMCE1-208ENST00000565070 EYA1Q99502 592 aa16.58■□□□□ 0.24
NSMCE1-208ENST00000565070 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
NSMCE1-208ENST00000565070 CRB1P82279 1406 aa16.57■□□□□ 0.24
NSMCE1-208ENST00000565070 FCHSD2O94868 740 aa16.57■□□□□ 0.24
NSMCE1-208ENST00000565070 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
NSMCE1-208ENST00000565070 STRN4Q9NRL3 753 aa16.57■□□□□ 0.24
NSMCE1-208ENST00000565070 NLRP2Q9NX02 1062 aa16.57■□□□□ 0.24
NSMCE1-208ENST00000565070 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
NSMCE1-208ENST00000565070 TOM1L2Q6ZVM7 507 aa16.56■□□□□ 0.24
NSMCE1-208ENST00000565070 TRMT2AQ8IZ69 625 aaKnown RBP16.56■□□□□ 0.24
NSMCE1-208ENST00000565070 KDRP35968 1356 aa16.56■□□□□ 0.24
NSMCE1-208ENST00000565070 SLFN5Q08AF3 891 aa16.56■□□□□ 0.24
NSMCE1-208ENST00000565070 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
NSMCE1-208ENST00000565070 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
NSMCE1-208ENST00000565070 NEFMP07197 916 aa16.55■□□□□ 0.24
NSMCE1-208ENST00000565070 NBPF6Q5VWK0 638 aa16.55■□□□□ 0.24
NSMCE1-208ENST00000565070 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
NSMCE1-208ENST00000565070 NBPF4Q96M43 638 aa16.55■□□□□ 0.24
NSMCE1-208ENST00000565070 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
NSMCE1-208ENST00000565070 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
NSMCE1-208ENST00000565070 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
NSMCE1-208ENST00000565070 BCL9LQ86UU0 1499 aa16.54■□□□□ 0.24
NSMCE1-208ENST00000565070 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
NSMCE1-208ENST00000565070 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
NSMCE1-208ENST00000565070 USP21Q9UK80 565 aa16.54■□□□□ 0.24
NSMCE1-208ENST00000565070 AFF2P51816 1311 aa16.53■□□□□ 0.24
NSMCE1-208ENST00000565070 HMOX1P09601 288 aa16.52■□□□□ 0.24
NSMCE1-208ENST00000565070 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms