RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
CDH1-206ENST00000564676 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
CDH1-206ENST00000564676 SEPT12Q8IYM1 358 aa13.76□□□□□ -0.21
CDH1-206ENST00000564676 COG3Q96JB2 828 aa13.76□□□□□ -0.21
CDH1-206ENST00000564676 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
CDH1-206ENST00000564676 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
CDH1-206ENST00000564676 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
CDH1-206ENST00000564676 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
CDH1-206ENST00000564676 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
CDH1-206ENST00000564676 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
CDH1-206ENST00000564676 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
CDH1-206ENST00000564676 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
CDH1-206ENST00000564676 FYB1O15117 783 aa13.73□□□□□ -0.21
CDH1-206ENST00000564676 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
CDH1-206ENST00000564676 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
CDH1-206ENST00000564676 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
CDH1-206ENST00000564676 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
CDH1-206ENST00000564676 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
CDH1-206ENST00000564676 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
CDH1-206ENST00000564676 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDH1-206ENST00000564676 NFAT5O94916 1531 aa13.72□□□□□ -0.21
CDH1-206ENST00000564676 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
CDH1-206ENST00000564676 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
CDH1-206ENST00000564676 TOM1L2Q6ZVM7 507 aa13.71□□□□□ -0.21
CDH1-206ENST00000564676 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.21
CDH1-206ENST00000564676 PANK3Q9H999 370 aa13.71□□□□□ -0.21
CDH1-206ENST00000564676 MYOM1P52179 1685 aa13.7□□□□□ -0.22
CDH1-206ENST00000564676 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
CDH1-206ENST00000564676 KRT27Q7Z3Y8 459 aa13.7□□□□□ -0.22
CDH1-206ENST00000564676 COL18A1P39060 1754 aa13.7□□□□□ -0.22
CDH1-206ENST00000564676 FBLN1P23142 703 aa13.69□□□□□ -0.22
CDH1-206ENST00000564676 BARGINQ6ZT62 677 aa13.69□□□□□ -0.22
CDH1-206ENST00000564676 THRAP3Q9Y2W1 955 aaKnown RBP13.69□□□□□ -0.22
CDH1-206ENST00000564676 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
CDH1-206ENST00000564676 WDR17Q8IZU2 1322 aa13.68□□□□□ -0.22
CDH1-206ENST00000564676 CRB1P82279 1406 aa13.68□□□□□ -0.22
CDH1-206ENST00000564676 AMPHP49418 695 aa13.68□□□□□ -0.22
CDH1-206ENST00000564676 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
CDH1-206ENST00000564676 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
CDH1-206ENST00000564676 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
CDH1-206ENST00000564676 IP6K1Q92551 441 aa13.67□□□□□ -0.22
CDH1-206ENST00000564676 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
CDH1-206ENST00000564676 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
CDH1-206ENST00000564676 LTN1O94822 1766 aa13.66□□□□□ -0.22
CDH1-206ENST00000564676 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
CDH1-206ENST00000564676 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
CDH1-206ENST00000564676 LTV1Q96GA3 475 aaPredicted RBP13.66□□□□□ -0.22
CDH1-206ENST00000564676 CARD10Q9BWT7 1032 aa13.66□□□□□ -0.22
CDH1-206ENST00000564676 ABCC6O95255 1503 aa13.65□□□□□ -0.22
CDH1-206ENST00000564676 PDE3BQ13370 1112 aa13.65□□□□□ -0.22
CDH1-206ENST00000564676 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.22
CDH1-206ENST00000564676 ERBB3P21860 1342 aa13.64□□□□□ -0.23
CDH1-206ENST00000564676 HOXC9P31274 260 aa13.64□□□□□ -0.23
CDH1-206ENST00000564676 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
CDH1-206ENST00000564676 FAM182BQ5T319 152 aa13.63□□□□□ -0.23
CDH1-206ENST00000564676 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
CDH1-206ENST00000564676 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
CDH1-206ENST00000564676 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
CDH1-206ENST00000564676 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
CDH1-206ENST00000564676 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
CDH1-206ENST00000564676 CCDC7Q96M83 1385 aa13.62□□□□□ -0.23
CDH1-206ENST00000564676 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
CDH1-206ENST00000564676 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
CDH1-206ENST00000564676 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
CDH1-206ENST00000564676 DDB1Q16531 1140 aa13.61□□□□□ -0.23
CDH1-206ENST00000564676 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
CDH1-206ENST00000564676 CAPN15O75808 1086 aa13.6□□□□□ -0.23
CDH1-206ENST00000564676 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
CDH1-206ENST00000564676 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
CDH1-206ENST00000564676 EXOC5O00471 708 aa13.59□□□□□ -0.23
CDH1-206ENST00000564676 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
CDH1-206ENST00000564676 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
CDH1-206ENST00000564676 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
CDH1-206ENST00000564676 NSD2O96028 1365 aa13.58□□□□□ -0.23
CDH1-206ENST00000564676 FLT4P35916 1363 aa13.58□□□□□ -0.23
CDH1-206ENST00000564676 IL2RBP14784 551 aa13.58□□□□□ -0.24
CDH1-206ENST00000564676 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
CDH1-206ENST00000564676 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
CDH1-206ENST00000564676 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
CDH1-206ENST00000564676 INSRP06213 1382 aa13.57□□□□□ -0.24
CDH1-206ENST00000564676 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
CDH1-206ENST00000564676 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
CDH1-206ENST00000564676 TRIM37O94972 964 aa13.56□□□□□ -0.24
CDH1-206ENST00000564676 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
CDH1-206ENST00000564676 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
CDH1-206ENST00000564676 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
CDH1-206ENST00000564676 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
CDH1-206ENST00000564676 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
CDH1-206ENST00000564676 DEFB132Q7Z7B7 95 aa13.55□□□□□ -0.24
CDH1-206ENST00000564676 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
CDH1-206ENST00000564676 ANKRD26Q9UPS8 1709 aa13.55□□□□□ -0.24
CDH1-206ENST00000564676 DSG3P32926 999 aa13.54□□□□□ -0.24
CDH1-206ENST00000564676 ZEB1P37275 1124 aaPredicted RBP13.54□□□□□ -0.24
CDH1-206ENST00000564676 BAG6P46379 1132 aa13.54□□□□□ -0.24
CDH1-206ENST00000564676 CNGB1Q14028 1251 aaPredicted RBP13.54□□□□□ -0.24
CDH1-206ENST00000564676 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
CDH1-206ENST00000564676 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
CDH1-206ENST00000564676 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
CDH1-206ENST00000564676 LRRC37A3O60309 1634 aa13.53□□□□□ -0.24
CDH1-206ENST00000564676 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms