RNA–Protein interactions for RNA: ENST00000564386.6

GCSH-203, Transcript of glycine cleavage system protein H, humanhuman

TSL 2

Gene GCSH, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-203ENST00000564386 SPATA31A7Q8IWB4 1347 aa29.77■■■□□ 2.36
GCSH-203ENST00000564386 ANKRD26Q9UPS8 1709 aa29.76■■■□□ 2.36
GCSH-203ENST00000564386 BRWD3Q6RI45 1802 aa29.76■■■□□ 2.35
GCSH-203ENST00000564386 GGNBP2Q9H3C7 697 aa29.76■■■□□ 2.35
GCSH-203ENST00000564386 CGNL1Q0VF96 1302 aa29.74■■■□□ 2.35
GCSH-203ENST00000564386 PANK3Q9H999 370 aa29.73■■■□□ 2.35
GCSH-203ENST00000564386 SPATA31A1Q5TZJ5 1347 aa29.71■■■□□ 2.35
GCSH-203ENST00000564386 LARP1Q6PKG0 1096 aaKnown RBP29.71■■■□□ 2.35
GCSH-203ENST00000564386 THSD7AQ9UPZ6 1657 aa29.7■■■□□ 2.35
GCSH-203ENST00000564386 CCDC7Q96M83 1385 aa29.7■■■□□ 2.35
GCSH-203ENST00000564386 AXIN2Q9Y2T1 843 aa29.7■■■□□ 2.35
GCSH-203ENST00000564386 CRB1P82279 1406 aa29.7■■■□□ 2.34
GCSH-203ENST00000564386 ONECUT3O60422 494 aaPredicted RBP29.69■■■□□ 2.34
GCSH-203ENST00000564386 FAM98CQ17RN3 349 aaKnown RBP29.69■■■□□ 2.34
GCSH-203ENST00000564386 SEPT12Q8IYM1 358 aa29.67■■■□□ 2.34
GCSH-203ENST00000564386 WDR17Q8IZU2 1322 aa29.67■■■□□ 2.34
GCSH-203ENST00000564386 WNK3Q9BYP7 1800 aa29.66■■■□□ 2.34
GCSH-203ENST00000564386 A0A0G2JS52 829 aa29.66■■■□□ 2.34
GCSH-203ENST00000564386 MYT1Q01538 1121 aa29.66■■■□□ 2.34
GCSH-203ENST00000564386 BLMP54132 1417 aaPredicted RBP29.65■■■□□ 2.34
GCSH-203ENST00000564386 USP35Q9P2H5 1018 aa29.65■■■□□ 2.34
GCSH-203ENST00000564386 FAM208AQ9UK61 1670 aaKnown RBP29.65■■■□□ 2.34
GCSH-203ENST00000564386 WASHC2AQ641Q2 1341 aa29.65■■■□□ 2.34
GCSH-203ENST00000564386 CSB-PGBD3P0DP91 1061 aa29.63■■■□□ 2.33
GCSH-203ENST00000564386 TOM1L2Q6ZVM7 507 aa29.63■■■□□ 2.33
GCSH-203ENST00000564386 TCP11L2Q8N4U5 519 aa29.63■■■□□ 2.33
GCSH-203ENST00000564386 THRAP3Q9Y2W1 955 aaKnown RBP29.63■■■□□ 2.33
GCSH-203ENST00000564386 MAP2P11137 1827 aaKnown RBP29.63■■■□□ 2.33
GCSH-203ENST00000564386 MAP3K19Q56UN5 1328 aa29.63■■■□□ 2.33
GCSH-203ENST00000564386 RTL1A6NKG5 1358 aa29.63■■■□□ 2.33
GCSH-203ENST00000564386 NSD2O96028 1365 aa29.63■■■□□ 2.33
GCSH-203ENST00000564386 ZEB1P37275 1124 aaPredicted RBP29.62■■■□□ 2.33
GCSH-203ENST00000564386 BARGINQ6ZT62 677 aa29.62■■■□□ 2.33
GCSH-203ENST00000564386 IP6K1Q92551 441 aa29.62■■■□□ 2.33
GCSH-203ENST00000564386 AMPHP49418 695 aa29.61■■■□□ 2.33
GCSH-203ENST00000564386 KNSTRNQ9Y448 316 aa29.61■■■□□ 2.33
GCSH-203ENST00000564386 PARP4Q9UKK3 1724 aaKnown RBP29.6■■■□□ 2.33
GCSH-203ENST00000564386 FBLN1P23142 703 aa29.6■■■□□ 2.33
GCSH-203ENST00000564386 ERBB3P21860 1342 aa29.6■■■□□ 2.33
GCSH-203ENST00000564386 RRS1Q15050 365 aaKnown RBP29.58■■■□□ 2.33
GCSH-203ENST00000564386 PEAK1Q9H792 1746 aa29.57■■■□□ 2.32
GCSH-203ENST00000564386 HOXC9P31274 260 aa29.57■■■□□ 2.32
GCSH-203ENST00000564386 ANKRD24Q8TF21 1146 aa29.57■■■□□ 2.32
GCSH-203ENST00000564386 KIF24Q5T7B8 1368 aa29.56■■■□□ 2.32
GCSH-203ENST00000564386 KRT27Q7Z3Y8 459 aa29.56■■■□□ 2.32
GCSH-203ENST00000564386 CARD10Q9BWT7 1032 aa29.56■■■□□ 2.32
GCSH-203ENST00000564386 FLT4P35916 1363 aa29.53■■■□□ 2.32
GCSH-203ENST00000564386 RGPD2P0DJD1 1756 aa29.53■■■□□ 2.32
GCSH-203ENST00000564386 UPF1Q92900 1129 aaKnown RBP eCLIP29.52■■■□□ 2.32
GCSH-203ENST00000564386 NLRP2Q9NX02 1062 aa29.52■■■□□ 2.32
GCSH-203ENST00000564386 LRRC37A3O60309 1634 aa29.52■■■□□ 2.32
GCSH-203ENST00000564386 LTV1Q96GA3 475 aaPredicted RBP29.5■■■□□ 2.31
GCSH-203ENST00000564386 SMG6Q86US8 1419 aaKnown RBP29.5■■■□□ 2.31
GCSH-203ENST00000564386 CDCA7Q9BWT1 371 aaPredicted RBP29.49■■■□□ 2.31
GCSH-203ENST00000564386 AMER1Q5JTC6 1135 aaPredicted RBP29.48■■■□□ 2.31
GCSH-203ENST00000564386 MORC1Q86VD1 984 aa29.48■■■□□ 2.31
GCSH-203ENST00000564386 EMILIN1Q9Y6C2 1016 aa29.48■■■□□ 2.31
GCSH-203ENST00000564386 INSRP06213 1382 aa29.48■■■□□ 2.31
GCSH-203ENST00000564386 PER1O15534 1290 aaPredicted RBP29.47■■■□□ 2.31
GCSH-203ENST00000564386 TNNT2P45379 298 aaPredicted RBP29.47■■■□□ 2.31
GCSH-203ENST00000564386 EP400Q96L91 3159 aa29.47■■■□□ 2.31
GCSH-203ENST00000564386 DISP2A7MBM2 1401 aa29.46■■■□□ 2.31
GCSH-203ENST00000564386 PDE3BQ13370 1112 aa29.45■■■□□ 2.31
GCSH-203ENST00000564386 PPM1GO15355 546 aaPredicted RBP29.44■■■□□ 2.3
GCSH-203ENST00000564386 HSP90AB2PQ58FF8 381 aa29.43■■■□□ 2.3
GCSH-203ENST00000564386 POLKQ9UBT6 870 aa29.43■■■□□ 2.3
GCSH-203ENST00000564386 NPC1L1Q9UHC9 1359 aa29.41■■■□□ 2.3
GCSH-203ENST00000564386 RGPD1P0DJD0 1748 aa29.41■■■□□ 2.3
GCSH-203ENST00000564386 DDB1Q16531 1140 aa29.41■■■□□ 2.3
GCSH-203ENST00000564386 CCDC125Q86Z20 511 aa29.39■■■□□ 2.3
GCSH-203ENST00000564386 IL2RBP14784 551 aa29.38■■■□□ 2.29
GCSH-203ENST00000564386 FAM182BQ5T319 152 aa29.38■■■□□ 2.29
GCSH-203ENST00000564386 TNS2Q63HR2 1409 aa29.37■■■□□ 2.29
GCSH-203ENST00000564386 CC2D1BQ5T0F9 858 aaKnown RBP29.37■■■□□ 2.29
GCSH-203ENST00000564386 FAM196AQ6ZSG2 479 aa29.36■■■□□ 2.29
GCSH-203ENST00000564386 OVOS2A0A0G2JMS6 1433 aa29.35■■■□□ 2.29
GCSH-203ENST00000564386 EXOC5O00471 708 aa29.34■■■□□ 2.29
GCSH-203ENST00000564386 TNS1Q9HBL0 1735 aaKnown RBP29.34■■■□□ 2.29
GCSH-203ENST00000564386 SBF2Q86WG5 1849 aa29.34■■■□□ 2.29
GCSH-203ENST00000564386 NBPF6Q5VWK0 638 aa29.33■■■□□ 2.29
GCSH-203ENST00000564386 NBPF4Q96M43 638 aa29.33■■■□□ 2.29
GCSH-203ENST00000564386 SF3B2Q13435 895 aaKnown RBP29.32■■■□□ 2.28
GCSH-203ENST00000564386 USHBP1Q8N6Y0 703 aa29.29■■■□□ 2.28
GCSH-203ENST00000564386 CNGB1Q14028 1251 aaPredicted RBP29.28■■■□□ 2.28
GCSH-203ENST00000564386 MEGF6O75095 1541 aa29.28■■■□□ 2.28
GCSH-203ENST00000564386 SHANK3Q9BYB0 1731 aa29.28■■■□□ 2.28
GCSH-203ENST00000564386 NCAPD2Q15021 1401 aa29.28■■■□□ 2.28
GCSH-203ENST00000564386 MARCH10Q8NA82 808 aaPredicted RBP29.27■■■□□ 2.28
GCSH-203ENST00000564386 EIF4A2Q14240 407 aaKnown RBP29.26■■■□□ 2.27
GCSH-203ENST00000564386 RAPGEF4Q8WZA2 1011 aa29.26■■■□□ 2.27
GCSH-203ENST00000564386 BCL9O00512 1426 aa29.24■■■□□ 2.27
GCSH-203ENST00000564386 TATP17735 454 aaPredicted RBP29.23■■■□□ 2.27
GCSH-203ENST00000564386 TRIM37O94972 964 aa29.22■■■□□ 2.27
GCSH-203ENST00000564386 MTHFSP49914 203 aa29.22■■■□□ 2.27
GCSH-203ENST00000564386 EYA1Q99502 592 aa29.22■■■□□ 2.27
GCSH-203ENST00000564386 PKD1L3Q7Z443 1732 aa29.22■■■□□ 2.27
GCSH-203ENST00000564386 KAT6BQ8WYB5 2073 aa29.22■■■□□ 2.27
GCSH-203ENST00000564386 BAG6P46379 1132 aa29.2■■■□□ 2.26
GCSH-203ENST00000564386 NHSQ6T4R5 1651 aa29.19■■■□□ 2.26
GCSH-203ENST00000564386 ZCRB1Q8TBF4 217 aaKnown RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms