RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KCNH5Q8NCM2 988 aa23.03■■□□□ 1.28
CMTM3-208ENST00000564247 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
CMTM3-208ENST00000564247 AATKQ6ZMQ8 1374 aa23.02■■□□□ 1.28
CMTM3-208ENST00000564247 NPC1L1Q9UHC9 1359 aa23.02■■□□□ 1.28
CMTM3-208ENST00000564247 EVA1CP58658 441 aa23.02■■□□□ 1.28
CMTM3-208ENST00000564247 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
CMTM3-208ENST00000564247 SPATA31A1Q5TZJ5 1347 aa23.02■■□□□ 1.28
CMTM3-208ENST00000564247 COL18A1P39060 1754 aa23.01■■□□□ 1.27
CMTM3-208ENST00000564247 RALBP1Q15311 655 aa23■■□□□ 1.27
CMTM3-208ENST00000564247 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
CMTM3-208ENST00000564247 COL5A2P05997 1499 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-208ENST00000564247 NFAT5O94916 1531 aa22.99■■□□□ 1.27
CMTM3-208ENST00000564247 FYB1O15117 783 aa22.99■■□□□ 1.27
CMTM3-208ENST00000564247 NME9Q86XW9 330 aa22.99■■□□□ 1.27
CMTM3-208ENST00000564247 NSD2O96028 1365 aa22.99■■□□□ 1.27
CMTM3-208ENST00000564247 KRT27Q7Z3Y8 459 aa22.98■■□□□ 1.27
CMTM3-208ENST00000564247 ARHGEF25Q86VW2 580 aa22.98■■□□□ 1.27
CMTM3-208ENST00000564247 PRKRIP1Q9H875 184 aaPredicted RBP22.98■■□□□ 1.27
CMTM3-208ENST00000564247 ZRANB1Q9UGI0 708 aa22.98■■□□□ 1.27
CMTM3-208ENST00000564247 A0A0G2JS52 829 aa22.97■■□□□ 1.27
CMTM3-208ENST00000564247 ZBTB7CA1YPR0 619 aa22.97■■□□□ 1.27
CMTM3-208ENST00000564247 MYT1Q01538 1121 aa22.97■■□□□ 1.27
CMTM3-208ENST00000564247 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
CMTM3-208ENST00000564247 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
CMTM3-208ENST00000564247 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
CMTM3-208ENST00000564247 GGNBP2Q9H3C7 697 aa22.96■■□□□ 1.27
CMTM3-208ENST00000564247 SOX12O15370 315 aa22.95■■□□□ 1.26
CMTM3-208ENST00000564247 ABCC6O95255 1503 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 OVOS2A0A0J9YW53 1432 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 OVOS2Q6IE36 1432 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 MIER1Q8N108 512 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 COG3Q96JB2 828 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 RGPD5Q99666 1765 aa22.94■■□□□ 1.26
CMTM3-208ENST00000564247 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
CMTM3-208ENST00000564247 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
CMTM3-208ENST00000564247 CRB1P82279 1406 aa22.92■■□□□ 1.26
CMTM3-208ENST00000564247 KIF20BQ96Q89 1820 aa22.92■■□□□ 1.26
CMTM3-208ENST00000564247 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
CMTM3-208ENST00000564247 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
CMTM3-208ENST00000564247 LTN1O94822 1766 aa22.91■■□□□ 1.26
CMTM3-208ENST00000564247 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
CMTM3-208ENST00000564247 BLMP54132 1417 aaPredicted RBP22.9■■□□□ 1.26
CMTM3-208ENST00000564247 WDR17Q8IZU2 1322 aa22.89■■□□□ 1.26
CMTM3-208ENST00000564247 MYBBP1AQ9BQG0 1328 aaKnown RBP22.87■■□□□ 1.25
CMTM3-208ENST00000564247 PARP4Q9UKK3 1724 aaKnown RBP22.86■■□□□ 1.25
CMTM3-208ENST00000564247 ANKRD26Q9UPS8 1709 aa22.86■■□□□ 1.25
CMTM3-208ENST00000564247 TNNT2P45379 298 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-208ENST00000564247 TOM1L2Q6ZVM7 507 aa22.86■■□□□ 1.25
CMTM3-208ENST00000564247 CCER2I3L3R5 266 aa22.84■■□□□ 1.25
CMTM3-208ENST00000564247 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
CMTM3-208ENST00000564247 WNK3Q9BYP7 1800 aa22.83■■□□□ 1.25
CMTM3-208ENST00000564247 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
CMTM3-208ENST00000564247 CARD10Q9BWT7 1032 aa22.82■■□□□ 1.24
CMTM3-208ENST00000564247 SF3B2Q13435 895 aaKnown RBP22.81■■□□□ 1.24
CMTM3-208ENST00000564247 FAM182BQ5T319 152 aa22.81■■□□□ 1.24
CMTM3-208ENST00000564247 RGPD1P0DJD0 1748 aa22.8■■□□□ 1.24
CMTM3-208ENST00000564247 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
CMTM3-208ENST00000564247 ERBB3P21860 1342 aa22.8■■□□□ 1.24
CMTM3-208ENST00000564247 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
CMTM3-208ENST00000564247 CDCA7Q9BWT1 371 aaPredicted RBP22.79■■□□□ 1.24
CMTM3-208ENST00000564247 IP6K1Q92551 441 aa22.78■■□□□ 1.24
CMTM3-208ENST00000564247 LRRC37A3O60309 1634 aa22.78■■□□□ 1.24
CMTM3-208ENST00000564247 MAP3K19Q56UN5 1328 aa22.76■■□□□ 1.23
CMTM3-208ENST00000564247 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
CMTM3-208ENST00000564247 MTHFSP49914 203 aa22.75■■□□□ 1.23
CMTM3-208ENST00000564247 DEFB132Q7Z7B7 95 aa22.75■■□□□ 1.23
CMTM3-208ENST00000564247 ANKRD24Q8TF21 1146 aa22.75■■□□□ 1.23
CMTM3-208ENST00000564247 CFAP53Q96M91 514 aa22.75■■□□□ 1.23
CMTM3-208ENST00000564247 MRS2Q9HD23 443 aa22.75■■□□□ 1.23
CMTM3-208ENST00000564247 TNS1Q9HBL0 1735 aaKnown RBP22.74■■□□□ 1.23
CMTM3-208ENST00000564247 MAP2P11137 1827 aaKnown RBP22.74■■□□□ 1.23
CMTM3-208ENST00000564247 FBLN1P23142 703 aa22.74■■□□□ 1.23
CMTM3-208ENST00000564247 DDB1Q16531 1140 aa22.74■■□□□ 1.23
CMTM3-208ENST00000564247 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
CMTM3-208ENST00000564247 FAM208AQ9UK61 1670 aaKnown RBP22.74■■□□□ 1.23
CMTM3-208ENST00000564247 PPM1GO15355 546 aaPredicted RBP22.73■■□□□ 1.23
CMTM3-208ENST00000564247 BAG6P46379 1132 aa22.73■■□□□ 1.23
CMTM3-208ENST00000564247 PEAK1Q9H792 1746 aa22.72■■□□□ 1.23
CMTM3-208ENST00000564247 HOXC9P31274 260 aa22.72■■□□□ 1.23
CMTM3-208ENST00000564247 AMPHP49418 695 aa22.72■■□□□ 1.23
CMTM3-208ENST00000564247 NLRP2Q9NX02 1062 aa22.72■■□□□ 1.23
CMTM3-208ENST00000564247 RTL1A6NKG5 1358 aa22.72■■□□□ 1.23
CMTM3-208ENST00000564247 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
CMTM3-208ENST00000564247 TRIM37O94972 964 aa22.7■■□□□ 1.22
CMTM3-208ENST00000564247 OVOS2A0A0G2JMS6 1433 aa22.7■■□□□ 1.22
CMTM3-208ENST00000564247 EMILIN1Q9Y6C2 1016 aa22.69■■□□□ 1.22
CMTM3-208ENST00000564247 CCDC184Q52MB2 194 aa22.68■■□□□ 1.22
CMTM3-208ENST00000564247 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
CMTM3-208ENST00000564247 KIF24Q5T7B8 1368 aa22.67■■□□□ 1.22
CMTM3-208ENST00000564247 EXOC5O00471 708 aa22.67■■□□□ 1.22
CMTM3-208ENST00000564247 LTV1Q96GA3 475 aaPredicted RBP22.67■■□□□ 1.22
CMTM3-208ENST00000564247 TNS2Q63HR2 1409 aa22.66■■□□□ 1.22
CMTM3-208ENST00000564247 IL2RBP14784 551 aa22.66■■□□□ 1.22
CMTM3-208ENST00000564247 BCL9O00512 1426 aa22.65■■□□□ 1.22
CMTM3-208ENST00000564247 EN1Q05925 392 aaPredicted RBP22.65■■□□□ 1.22
CMTM3-208ENST00000564247 MARCH10Q8NA82 808 aaPredicted RBP22.65■■□□□ 1.22
CMTM3-208ENST00000564247 RGPD2P0DJD1 1756 aa22.65■■□□□ 1.22
CMTM3-208ENST00000564247 NUDCQ9Y266 331 aa22.64■■□□□ 1.21
CMTM3-208ENST00000564247 FLT4P35916 1363 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms