RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 LARP1Q6PKG0 1096 aaKnown RBP27.08■■□□□ 1.93
SLX1A-204ENST00000563995 SBF2Q86WG5 1849 aa27.08■■□□□ 1.93
SLX1A-204ENST00000563995 MYOM1P52179 1685 aa27.08■■□□□ 1.92
SLX1A-204ENST00000563995 MON2Q7Z3U7 1717 aa27.07■■□□□ 1.92
SLX1A-204ENST00000563995 HDGFL2Q7Z4V5 671 aaPredicted RBP27.07■■□□□ 1.92
SLX1A-204ENST00000563995 ABTB2Q8N961 1025 aa27.07■■□□□ 1.92
SLX1A-204ENST00000563995 ZNF784Q8NCA9 323 aaPredicted RBP27.07■■□□□ 1.92
SLX1A-204ENST00000563995 SPON1Q9HCB6 807 aa27.07■■□□□ 1.92
SLX1A-204ENST00000563995 KTN1Q86UP2 1357 aaKnown RBP27.07■■□□□ 1.92
SLX1A-204ENST00000563995 PEAK1Q9H792 1746 aa27.07■■□□□ 1.92
SLX1A-204ENST00000563995 WNK3Q9BYP7 1800 aa27.06■■□□□ 1.92
SLX1A-204ENST00000563995 COL5A2P05997 1499 aaPredicted RBP27.06■■□□□ 1.92
SLX1A-204ENST00000563995 EVA1CP58658 441 aa27.06■■□□□ 1.92
SLX1A-204ENST00000563995 TERF2IPQ9NYB0 399 aa27.06■■□□□ 1.92
SLX1A-204ENST00000563995 A0A1W2PP64 1363 aa27.06■■□□□ 1.92
SLX1A-204ENST00000563995 C11orf95C9JLR9 678 aaPredicted RBP27.05■■□□□ 1.92
SLX1A-204ENST00000563995 APBA3O96018 575 aa27.05■■□□□ 1.92
SLX1A-204ENST00000563995 RGPD3A6NKT7 1758 aaPredicted RBP27.04■■□□□ 1.92
SLX1A-204ENST00000563995 RGPD4Q7Z3J3 1758 aa27.04■■□□□ 1.92
SLX1A-204ENST00000563995 NBPF14Q5TI25 921 aa27.04■■□□□ 1.92
SLX1A-204ENST00000563995 TCP11L2Q8N4U5 519 aa27.04■■□□□ 1.92
SLX1A-204ENST00000563995 ANKRD36BQ8N2N9 1353 aa27.04■■□□□ 1.92
SLX1A-204ENST00000563995 LRRC37A3O60309 1634 aa27.03■■□□□ 1.92
SLX1A-204ENST00000563995 SLIT3O75094 1523 aa27.03■■□□□ 1.92
SLX1A-204ENST00000563995 COL18A1P39060 1754 aa27.03■■□□□ 1.92
SLX1A-204ENST00000563995 POLR3GLQ9BT43 218 aa27.03■■□□□ 1.92
SLX1A-204ENST00000563995 KCNQ2O43526 872 aa27.02■■□□□ 1.92
SLX1A-204ENST00000563995 PDE3BQ13370 1112 aa27.02■■□□□ 1.92
SLX1A-204ENST00000563995 PIK3C2AO00443 1686 aa27.01■■□□□ 1.92
SLX1A-204ENST00000563995 TTC21BQ7Z4L5 1316 aa27.01■■□□□ 1.91
SLX1A-204ENST00000563995 GCP02774 474 aa27.01■■□□□ 1.91
SLX1A-204ENST00000563995 THRAP3Q9Y2W1 955 aaKnown RBP27.01■■□□□ 1.91
SLX1A-204ENST00000563995 EDC4Q6P2E9 1401 aaKnown RBP27■■□□□ 1.91
SLX1A-204ENST00000563995 NLRP13Q86W25 1043 aa27■■□□□ 1.91
SLX1A-204ENST00000563995 KIF7Q2M1P5 1343 aa26.99■■□□□ 1.91
SLX1A-204ENST00000563995 TTC21AQ8NDW8 1320 aa26.99■■□□□ 1.91
SLX1A-204ENST00000563995 CRB1P82279 1406 aa26.99■■□□□ 1.91
SLX1A-204ENST00000563995 RGPD5Q99666 1765 aa26.97■■□□□ 1.91
SLX1A-204ENST00000563995 C1QTNF8P60827 252 aa26.97■■□□□ 1.91
SLX1A-204ENST00000563995 AATKQ6ZMQ8 1374 aa26.94■■□□□ 1.9
SLX1A-204ENST00000563995 OVOS2A0A0G2JMS6 1433 aa26.93■■□□□ 1.9
SLX1A-204ENST00000563995 OVOS2A0A0J9YW53 1432 aa26.93■■□□□ 1.9
SLX1A-204ENST00000563995 OVOS2Q6IE36 1432 aa26.93■■□□□ 1.9
SLX1A-204ENST00000563995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.93■■□□□ 1.9
SLX1A-204ENST00000563995 CCDC7Q96M83 1385 aa26.93■■□□□ 1.9
SLX1A-204ENST00000563995 WASHC2AQ641Q2 1341 aa26.9■■□□□ 1.9
SLX1A-204ENST00000563995 NLRP6P59044 892 aa26.9■■□□□ 1.9
SLX1A-204ENST00000563995 CASZ1Q86V15 1759 aa26.89■■□□□ 1.9
SLX1A-204ENST00000563995 USP54Q70EL1 1684 aa26.89■■□□□ 1.89
SLX1A-204ENST00000563995 USP31Q70CQ4 1352 aa26.88■■□□□ 1.89
SLX1A-204ENST00000563995 NME9Q86XW9 330 aa26.88■■□□□ 1.89
SLX1A-204ENST00000563995 CARD14Q9BXL6 1004 aa26.88■■□□□ 1.89
SLX1A-204ENST00000563995 NSD3Q9BZ95 1437 aa26.88■■□□□ 1.89
SLX1A-204ENST00000563995 PANK3Q9H999 370 aa26.85■■□□□ 1.89
SLX1A-204ENST00000563995 ZBTB7CA1YPR0 619 aa26.84■■□□□ 1.89
SLX1A-204ENST00000563995 AXIN2Q9Y2T1 843 aa26.82■■□□□ 1.88
SLX1A-204ENST00000563995 WDR17Q8IZU2 1322 aa26.82■■□□□ 1.88
SLX1A-204ENST00000563995 BCL9O00512 1426 aa26.82■■□□□ 1.88
SLX1A-204ENST00000563995 NFAT5O94916 1531 aa26.81■■□□□ 1.88
SLX1A-204ENST00000563995 PLSCR1O15162 318 aa26.81■■□□□ 1.88
SLX1A-204ENST00000563995 DDB1Q16531 1140 aa26.81■■□□□ 1.88
SLX1A-204ENST00000563995 TOM1L2Q6ZVM7 507 aa26.81■■□□□ 1.88
SLX1A-204ENST00000563995 KIF20BQ96Q89 1820 aa26.81■■□□□ 1.88
SLX1A-204ENST00000563995 FYB1O15117 783 aa26.8■■□□□ 1.88
SLX1A-204ENST00000563995 ABCC6O95255 1503 aa26.79■■□□□ 1.88
SLX1A-204ENST00000563995 PTF1AQ7RTS3 328 aa26.78■■□□□ 1.88
SLX1A-204ENST00000563995 KCNH5Q8NCM2 988 aa26.78■■□□□ 1.88
SLX1A-204ENST00000563995 CGNL1Q0VF96 1302 aa26.77■■□□□ 1.88
SLX1A-204ENST00000563995 ARHGEF25Q86VW2 580 aa26.77■■□□□ 1.88
SLX1A-204ENST00000563995 COG3Q96JB2 828 aa26.77■■□□□ 1.88
SLX1A-204ENST00000563995 ANO8Q9HCE9 1232 aaPredicted RBP26.77■■□□□ 1.88
SLX1A-204ENST00000563995 MARCH10Q8NA82 808 aaPredicted RBP26.76■■□□□ 1.87
SLX1A-204ENST00000563995 BCL11BQ9C0K0 894 aaPredicted RBP26.76■■□□□ 1.87
SLX1A-204ENST00000563995 GGNBP2Q9H3C7 697 aa26.76■■□□□ 1.87
SLX1A-204ENST00000563995 CHD4Q14839 1912 aa26.75■■□□□ 1.87
SLX1A-204ENST00000563995 LTN1O94822 1766 aa26.74■■□□□ 1.87
SLX1A-204ENST00000563995 CDCA7Q9BWT1 371 aaPredicted RBP26.74■■□□□ 1.87
SLX1A-204ENST00000563995 SOX12O15370 315 aa26.73■■□□□ 1.87
SLX1A-204ENST00000563995 NHSQ6T4R5 1651 aa26.73■■□□□ 1.87
SLX1A-204ENST00000563995 PROM2Q8N271 834 aa26.72■■□□□ 1.87
SLX1A-204ENST00000563995 CARD10Q9BWT7 1032 aa26.72■■□□□ 1.87
SLX1A-204ENST00000563995 KNSTRNQ9Y448 316 aa26.71■■□□□ 1.87
SLX1A-204ENST00000563995 UTRNP46939 3433 aa26.71■■□□□ 1.87
SLX1A-204ENST00000563995 PER1O15534 1290 aaPredicted RBP26.69■■□□□ 1.86
SLX1A-204ENST00000563995 ZBTB7AO95365 584 aa26.69■■□□□ 1.86
SLX1A-204ENST00000563995 TNS2Q63HR2 1409 aa26.69■■□□□ 1.86
SLX1A-204ENST00000563995 NSD2O96028 1365 aa26.69■■□□□ 1.86
SLX1A-204ENST00000563995 ANKRD26Q9UPS8 1709 aa26.68■■□□□ 1.86
SLX1A-204ENST00000563995 PTGER2P43116 358 aa26.68■■□□□ 1.86
SLX1A-204ENST00000563995 PDGFDQ9GZP0 370 aaPredicted RBP26.68■■□□□ 1.86
SLX1A-204ENST00000563995 GIGYF1O75420 1035 aaPredicted RBP26.67■■□□□ 1.86
SLX1A-204ENST00000563995 SYT17Q9BSW7 474 aa26.67■■□□□ 1.86
SLX1A-204ENST00000563995 CSB-PGBD3P0DP91 1061 aa26.66■■□□□ 1.86
SLX1A-204ENST00000563995 FHDC1Q9C0D6 1143 aaPredicted RBP26.66■■□□□ 1.86
SLX1A-204ENST00000563995 AMER1Q5JTC6 1135 aaPredicted RBP26.65■■□□□ 1.86
SLX1A-204ENST00000563995 PAPPAQ13219 1627 aa26.65■■□□□ 1.86
SLX1A-204ENST00000563995 BTAF1O14981 1849 aa26.64■■□□□ 1.85
SLX1A-204ENST00000563995 ATF5Q9Y2D1 282 aaPredicted RBP26.63■■□□□ 1.85
SLX1A-204ENST00000563995 TXNRD1Q16881 649 aa26.62■■□□□ 1.85
SLX1A-204ENST00000563995 KAT6BQ8WYB5 2073 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms