RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 FAM98CQ17RN3 349 aaKnown RBP28.11■■■□□ 2.09
CMTM3-206ENST00000563672 UPF1Q92900 1129 aaKnown RBP eCLIP28.08■■■□□ 2.09
CMTM3-206ENST00000563672 NSD3Q9BZ95 1437 aa28.08■■■□□ 2.09
CMTM3-206ENST00000563672 GGNBP2Q9H3C7 697 aa28.07■■■□□ 2.08
CMTM3-206ENST00000563672 ABCC6O95255 1503 aa28.05■■■□□ 2.08
CMTM3-206ENST00000563672 CRB1P82279 1406 aa28.04■■■□□ 2.08
CMTM3-206ENST00000563672 BARGINQ6ZT62 677 aa28.04■■■□□ 2.08
CMTM3-206ENST00000563672 USP35Q9P2H5 1018 aa28.04■■■□□ 2.08
CMTM3-206ENST00000563672 KIF7Q2M1P5 1343 aa28.03■■■□□ 2.08
CMTM3-206ENST00000563672 WDR17Q8IZU2 1322 aa28.03■■■□□ 2.08
CMTM3-206ENST00000563672 TCP11L2Q8N4U5 519 aa28.03■■■□□ 2.08
CMTM3-206ENST00000563672 PANK3Q9H999 370 aa28.02■■■□□ 2.08
CMTM3-206ENST00000563672 THRAP3Q9Y2W1 955 aaKnown RBP28.02■■■□□ 2.08
CMTM3-206ENST00000563672 A0A0G2JS52 829 aa28.01■■■□□ 2.07
CMTM3-206ENST00000563672 FBLN1P23142 703 aa28.01■■■□□ 2.07
CMTM3-206ENST00000563672 MYT1Q01538 1121 aa28.01■■■□□ 2.07
CMTM3-206ENST00000563672 KRT27Q7Z3Y8 459 aa28■■■□□ 2.07
CMTM3-206ENST00000563672 CGNL1Q0VF96 1302 aa27.99■■■□□ 2.07
CMTM3-206ENST00000563672 TOM1L2Q6ZVM7 507 aa27.99■■■□□ 2.07
CMTM3-206ENST00000563672 THSD7AQ9UPZ6 1657 aa27.99■■■□□ 2.07
CMTM3-206ENST00000563672 MAP3K19Q56UN5 1328 aa27.98■■■□□ 2.07
CMTM3-206ENST00000563672 IP6K1Q92551 441 aa27.98■■■□□ 2.07
CMTM3-206ENST00000563672 BRWD3Q6RI45 1802 aa27.97■■■□□ 2.07
CMTM3-206ENST00000563672 CSB-PGBD3P0DP91 1061 aa27.96■■■□□ 2.07
CMTM3-206ENST00000563672 CARD10Q9BWT7 1032 aa27.96■■■□□ 2.07
CMTM3-206ENST00000563672 ERBB3P21860 1342 aa27.95■■■□□ 2.07
CMTM3-206ENST00000563672 LTN1O94822 1766 aa27.95■■■□□ 2.06
CMTM3-206ENST00000563672 RGPD5Q99666 1765 aa27.95■■■□□ 2.06
CMTM3-206ENST00000563672 KIF20BQ96Q89 1820 aa27.95■■■□□ 2.06
CMTM3-206ENST00000563672 BLMP54132 1417 aaPredicted RBP27.94■■■□□ 2.06
CMTM3-206ENST00000563672 RRS1Q15050 365 aaKnown RBP27.93■■■□□ 2.06
CMTM3-206ENST00000563672 ANKRD24Q8TF21 1146 aa27.93■■■□□ 2.06
CMTM3-206ENST00000563672 EP400Q96L91 3159 aa27.93■■■□□ 2.06
CMTM3-206ENST00000563672 HOXC9P31274 260 aa27.92■■■□□ 2.06
CMTM3-206ENST00000563672 AMPHP49418 695 aa27.92■■■□□ 2.06
CMTM3-206ENST00000563672 CCDC7Q96M83 1385 aa27.91■■■□□ 2.06
CMTM3-206ENST00000563672 WASHC2AQ641Q2 1341 aa27.91■■■□□ 2.06
CMTM3-206ENST00000563672 RTL1A6NKG5 1358 aa27.89■■■□□ 2.06
CMTM3-206ENST00000563672 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
CMTM3-206ENST00000563672 CDCA7Q9BWT1 371 aaPredicted RBP27.87■■■□□ 2.05
CMTM3-206ENST00000563672 NLRP2Q9NX02 1062 aa27.87■■■□□ 2.05
CMTM3-206ENST00000563672 FAM182BQ5T319 152 aa27.86■■■□□ 2.05
CMTM3-206ENST00000563672 KNSTRNQ9Y448 316 aa27.86■■■□□ 2.05
CMTM3-206ENST00000563672 KIF24Q5T7B8 1368 aa27.86■■■□□ 2.05
CMTM3-206ENST00000563672 PDE3BQ13370 1112 aa27.85■■■□□ 2.05
CMTM3-206ENST00000563672 NSD2O96028 1365 aa27.85■■■□□ 2.05
CMTM3-206ENST00000563672 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
CMTM3-206ENST00000563672 LTV1Q96GA3 475 aaPredicted RBP27.84■■■□□ 2.05
CMTM3-206ENST00000563672 EMILIN1Q9Y6C2 1016 aa27.83■■■□□ 2.05
CMTM3-206ENST00000563672 PARP4Q9UKK3 1724 aaKnown RBP27.82■■■□□ 2.04
CMTM3-206ENST00000563672 PER1O15534 1290 aaPredicted RBP27.82■■■□□ 2.04
CMTM3-206ENST00000563672 HSP90AB2PQ58FF8 381 aa27.81■■■□□ 2.04
CMTM3-206ENST00000563672 AMER1Q5JTC6 1135 aaPredicted RBP27.81■■■□□ 2.04
CMTM3-206ENST00000563672 INSRP06213 1382 aa27.81■■■□□ 2.04
CMTM3-206ENST00000563672 FLT4P35916 1363 aa27.81■■■□□ 2.04
CMTM3-206ENST00000563672 DDB1Q16531 1140 aa27.8■■■□□ 2.04
CMTM3-206ENST00000563672 FAM196AQ6ZSG2 479 aa27.8■■■□□ 2.04
CMTM3-206ENST00000563672 POLKQ9UBT6 870 aa27.8■■■□□ 2.04
CMTM3-206ENST00000563672 PEAK1Q9H792 1746 aa27.78■■■□□ 2.04
CMTM3-206ENST00000563672 ANKRD26Q9UPS8 1709 aa27.78■■■□□ 2.04
CMTM3-206ENST00000563672 TNNT2P45379 298 aaPredicted RBP27.77■■■□□ 2.04
CMTM3-206ENST00000563672 IL2RBP14784 551 aa27.76■■■□□ 2.03
CMTM3-206ENST00000563672 MORC1Q86VD1 984 aa27.76■■■□□ 2.03
CMTM3-206ENST00000563672 LRRC37A3O60309 1634 aa27.75■■■□□ 2.03
CMTM3-206ENST00000563672 EXOC5O00471 708 aa27.75■■■□□ 2.03
CMTM3-206ENST00000563672 WNK3Q9BYP7 1800 aa27.75■■■□□ 2.03
CMTM3-206ENST00000563672 PPM1GO15355 546 aaPredicted RBP27.74■■■□□ 2.03
CMTM3-206ENST00000563672 NBPF6Q5VWK0 638 aa27.74■■■□□ 2.03
CMTM3-206ENST00000563672 NBPF4Q96M43 638 aa27.74■■■□□ 2.03
CMTM3-206ENST00000563672 FAM208AQ9UK61 1670 aaKnown RBP27.74■■■□□ 2.03
CMTM3-206ENST00000563672 SMG6Q86US8 1419 aaKnown RBP27.73■■■□□ 2.03
CMTM3-206ENST00000563672 SF3B2Q13435 895 aaKnown RBP27.72■■■□□ 2.03
CMTM3-206ENST00000563672 MARCH10Q8NA82 808 aaPredicted RBP27.72■■■□□ 2.03
CMTM3-206ENST00000563672 MAP2P11137 1827 aaKnown RBP27.69■■■□□ 2.02
CMTM3-206ENST00000563672 OVOS2A0A0G2JMS6 1433 aa27.69■■■□□ 2.02
CMTM3-206ENST00000563672 TNS2Q63HR2 1409 aa27.69■■■□□ 2.02
CMTM3-206ENST00000563672 DEFB132Q7Z7B7 95 aa27.69■■■□□ 2.02
CMTM3-206ENST00000563672 TRIM37O94972 964 aa27.68■■■□□ 2.02
CMTM3-206ENST00000563672 NPC1L1Q9UHC9 1359 aa27.68■■■□□ 2.02
CMTM3-206ENST00000563672 BCL9O00512 1426 aa27.67■■■□□ 2.02
CMTM3-206ENST00000563672 USHBP1Q8N6Y0 703 aa27.66■■■□□ 2.02
CMTM3-206ENST00000563672 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
CMTM3-206ENST00000563672 RGPD2P0DJD1 1756 aa27.65■■■□□ 2.02
CMTM3-206ENST00000563672 CC2D1BQ5T0F9 858 aaKnown RBP27.64■■■□□ 2.02
CMTM3-206ENST00000563672 BAG6P46379 1132 aa27.63■■■□□ 2.01
CMTM3-206ENST00000563672 RGPD1P0DJD0 1748 aa27.63■■■□□ 2.01
CMTM3-206ENST00000563672 EIF4A2Q14240 407 aaKnown RBP27.62■■■□□ 2.01
CMTM3-206ENST00000563672 MEGF6O75095 1541 aa27.62■■■□□ 2.01
CMTM3-206ENST00000563672 NCAPD2Q15021 1401 aa27.61■■■□□ 2.01
CMTM3-206ENST00000563672 EYA1Q99502 592 aa27.61■■■□□ 2.01
CMTM3-206ENST00000563672 RAPGEF4Q8WZA2 1011 aa27.6■■■□□ 2.01
CMTM3-206ENST00000563672 TNS1Q9HBL0 1735 aaKnown RBP27.59■■■□□ 2.01
CMTM3-206ENST00000563672 APBA3O96018 575 aa27.59■■■□□ 2.01
CMTM3-206ENST00000563672 EN1Q05925 392 aaPredicted RBP27.59■■■□□ 2.01
CMTM3-206ENST00000563672 ZCRB1Q8TBF4 217 aaKnown RBP27.59■■■□□ 2.01
CMTM3-206ENST00000563672 TATP17735 454 aaPredicted RBP27.57■■■□□ 2
CMTM3-206ENST00000563672 BCL11BQ9C0K0 894 aaPredicted RBP27.57■■■□□ 2
CMTM3-206ENST00000563672 PTF1AQ7RTS3 328 aa27.56■■■□□ 2
CMTM3-206ENST00000563672 DDX54Q8TDD1 881 aaKnown RBP27.56■■■□□ 2
CMTM3-206ENST00000563672 MTHFSP49914 203 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms