RNA–Protein interactions for RNA: ENST00000563600.5

BBS4-206, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-206ENST00000563600 USP54Q70EL1 1684 aa20.5■□□□□ 0.87
BBS4-206ENST00000563600 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
BBS4-206ENST00000563600 FBLN1P23142 703 aa20.49■□□□□ 0.87
BBS4-206ENST00000563600 SPATA31A1Q5TZJ5 1347 aa20.49■□□□□ 0.87
BBS4-206ENST00000563600 FYB1O15117 783 aa20.48■□□□□ 0.87
BBS4-206ENST00000563600 COL18A1P39060 1754 aa20.47■□□□□ 0.87
BBS4-206ENST00000563600 KIF7Q2M1P5 1343 aa20.46■□□□□ 0.87
BBS4-206ENST00000563600 PANK3Q9H999 370 aa20.45■□□□□ 0.86
BBS4-206ENST00000563600 RGPD5Q99666 1765 aa20.44■□□□□ 0.86
BBS4-206ENST00000563600 ONECUT3O60422 494 aaPredicted RBP20.44■□□□□ 0.86
BBS4-206ENST00000563600 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
BBS4-206ENST00000563600 TOM1L2Q6ZVM7 507 aa20.44■□□□□ 0.86
BBS4-206ENST00000563600 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
BBS4-206ENST00000563600 LTN1O94822 1766 aa20.44■□□□□ 0.86
BBS4-206ENST00000563600 BRWD3Q6RI45 1802 aa20.43■□□□□ 0.86
BBS4-206ENST00000563600 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
BBS4-206ENST00000563600 CRB1P82279 1406 aa20.42■□□□□ 0.86
BBS4-206ENST00000563600 RRS1Q15050 365 aaKnown RBP20.41■□□□□ 0.86
BBS4-206ENST00000563600 KRT27Q7Z3Y8 459 aa20.41■□□□□ 0.86
BBS4-206ENST00000563600 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
BBS4-206ENST00000563600 WDR17Q8IZU2 1322 aa20.41■□□□□ 0.86
BBS4-206ENST00000563600 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
BBS4-206ENST00000563600 MAP3K19Q56UN5 1328 aa20.4■□□□□ 0.86
BBS4-206ENST00000563600 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
BBS4-206ENST00000563600 THSD7AQ9UPZ6 1657 aa20.39■□□□□ 0.86
BBS4-206ENST00000563600 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
BBS4-206ENST00000563600 AMPHP49418 695 aa20.38■□□□□ 0.85
BBS4-206ENST00000563600 BARGINQ6ZT62 677 aa20.37■□□□□ 0.85
BBS4-206ENST00000563600 ANKRD24Q8TF21 1146 aa20.37■□□□□ 0.85
BBS4-206ENST00000563600 ABCC6O95255 1503 aa20.37■□□□□ 0.85
BBS4-206ENST00000563600 IP6K1Q92551 441 aa20.36■□□□□ 0.85
BBS4-206ENST00000563600 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
BBS4-206ENST00000563600 ERBB3P21860 1342 aa20.35■□□□□ 0.85
BBS4-206ENST00000563600 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
BBS4-206ENST00000563600 EP400Q96L91 3159 aa20.35■□□□□ 0.85
BBS4-206ENST00000563600 HOXC9P31274 260 aa20.35■□□□□ 0.85
BBS4-206ENST00000563600 TNNT2P45379 298 aaPredicted RBP20.35■□□□□ 0.85
BBS4-206ENST00000563600 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
BBS4-206ENST00000563600 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
BBS4-206ENST00000563600 CARD10Q9BWT7 1032 aa20.34■□□□□ 0.85
BBS4-206ENST00000563600 BLMP54132 1417 aaPredicted RBP20.33■□□□□ 0.84
BBS4-206ENST00000563600 PPM1GO15355 546 aaPredicted RBP20.32■□□□□ 0.84
BBS4-206ENST00000563600 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
BBS4-206ENST00000563600 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
BBS4-206ENST00000563600 KNSTRNQ9Y448 316 aa20.31■□□□□ 0.84
BBS4-206ENST00000563600 PEAK1Q9H792 1746 aa20.3■□□□□ 0.84
BBS4-206ENST00000563600 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
BBS4-206ENST00000563600 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
BBS4-206ENST00000563600 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
BBS4-206ENST00000563600 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
BBS4-206ENST00000563600 DDB1Q16531 1140 aa20.27■□□□□ 0.84
BBS4-206ENST00000563600 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.83
BBS4-206ENST00000563600 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.83
BBS4-206ENST00000563600 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
BBS4-206ENST00000563600 FLT4P35916 1363 aa20.26■□□□□ 0.83
BBS4-206ENST00000563600 MORC1Q86VD1 984 aa20.26■□□□□ 0.83
BBS4-206ENST00000563600 DISP2A7MBM2 1401 aa20.26■□□□□ 0.83
BBS4-206ENST00000563600 NSD2O96028 1365 aa20.25■□□□□ 0.83
BBS4-206ENST00000563600 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
BBS4-206ENST00000563600 AMER1Q5JTC6 1135 aaPredicted RBP20.24■□□□□ 0.83
BBS4-206ENST00000563600 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
BBS4-206ENST00000563600 CDCA7Q9BWT1 371 aaPredicted RBP20.24■□□□□ 0.83
BBS4-206ENST00000563600 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
BBS4-206ENST00000563600 RGPD2P0DJD1 1756 aa20.23■□□□□ 0.83
BBS4-206ENST00000563600 INSRP06213 1382 aa20.23■□□□□ 0.83
BBS4-206ENST00000563600 SF3B2Q13435 895 aaKnown RBP20.23■□□□□ 0.83
BBS4-206ENST00000563600 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
BBS4-206ENST00000563600 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
BBS4-206ENST00000563600 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
BBS4-206ENST00000563600 TRIM37O94972 964 aa20.22■□□□□ 0.83
BBS4-206ENST00000563600 IL2RBP14784 551 aa20.22■□□□□ 0.83
BBS4-206ENST00000563600 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
BBS4-206ENST00000563600 FAM196AQ6ZSG2 479 aa20.22■□□□□ 0.83
BBS4-206ENST00000563600 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
BBS4-206ENST00000563600 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
BBS4-206ENST00000563600 EXOC5O00471 708 aa20.21■□□□□ 0.83
BBS4-206ENST00000563600 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
BBS4-206ENST00000563600 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
BBS4-206ENST00000563600 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
BBS4-206ENST00000563600 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
BBS4-206ENST00000563600 TNS2Q63HR2 1409 aa20.19■□□□□ 0.82
BBS4-206ENST00000563600 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
BBS4-206ENST00000563600 MEGF6O75095 1541 aa20.16■□□□□ 0.82
BBS4-206ENST00000563600 RGPD1P0DJD0 1748 aa20.15■□□□□ 0.82
BBS4-206ENST00000563600 BAG6P46379 1132 aa20.14■□□□□ 0.81
BBS4-206ENST00000563600 EN1Q05925 392 aaPredicted RBP20.14■□□□□ 0.81
BBS4-206ENST00000563600 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
BBS4-206ENST00000563600 DDX54Q8TDD1 881 aaKnown RBP20.14■□□□□ 0.81
BBS4-206ENST00000563600 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
BBS4-206ENST00000563600 APBA3O96018 575 aa20.13■□□□□ 0.81
BBS4-206ENST00000563600 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
BBS4-206ENST00000563600 PTF1AQ7RTS3 328 aa20.13■□□□□ 0.81
BBS4-206ENST00000563600 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
BBS4-206ENST00000563600 EYA1Q99502 592 aa20.12■□□□□ 0.81
BBS4-206ENST00000563600 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
BBS4-206ENST00000563600 TATP17735 454 aaPredicted RBP20.1■□□□□ 0.81
BBS4-206ENST00000563600 MTHFSP49914 203 aa20.1■□□□□ 0.81
BBS4-206ENST00000563600 ZCRB1Q8TBF4 217 aaKnown RBP20.1■□□□□ 0.81
BBS4-206ENST00000563600 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
BBS4-206ENST00000563600 KCNQ2O43526 872 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms