RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
CKLF-208ENST00000563092 RGPD4Q7Z3J3 1758 aa12.32□□□□□ -0.44
CKLF-208ENST00000563092 C11orf95C9JLR9 678 aaPredicted RBP12.31□□□□□ -0.44
CKLF-208ENST00000563092 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
CKLF-208ENST00000563092 ACEP12821 1306 aa12.3□□□□□ -0.44
CKLF-208ENST00000563092 UTRNP46939 3433 aa12.29□□□□□ -0.44
CKLF-208ENST00000563092 CASZ1Q86V15 1759 aa12.29□□□□□ -0.44
CKLF-208ENST00000563092 PLSCR1O15162 318 aa12.29□□□□□ -0.44
CKLF-208ENST00000563092 USP35Q9P2H5 1018 aa12.29□□□□□ -0.44
CKLF-208ENST00000563092 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
CKLF-208ENST00000563092 BCL9O00512 1426 aa12.28□□□□□ -0.44
CKLF-208ENST00000563092 EVA1CP58658 441 aa12.28□□□□□ -0.44
CKLF-208ENST00000563092 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
CKLF-208ENST00000563092 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
CKLF-208ENST00000563092 CDK19Q9BWU1 502 aa12.28□□□□□ -0.44
CKLF-208ENST00000563092 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
CKLF-208ENST00000563092 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
CKLF-208ENST00000563092 CRB1P82279 1406 aa12.27□□□□□ -0.45
CKLF-208ENST00000563092 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
CKLF-208ENST00000563092 GCP02774 474 aa12.26□□□□□ -0.45
CKLF-208ENST00000563092 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
CKLF-208ENST00000563092 BRD4O60885 1362 aaPredicted RBP12.26□□□□□ -0.45
CKLF-208ENST00000563092 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
CKLF-208ENST00000563092 HAX1O00165 279 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 PROM2Q8N271 834 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
CKLF-208ENST00000563092 KDM2AQ9Y2K7 1162 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 AATKQ6ZMQ8 1374 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 SBF2Q86WG5 1849 aa12.25□□□□□ -0.45
CKLF-208ENST00000563092 SLIT3O75094 1523 aa12.24□□□□□ -0.45
CKLF-208ENST00000563092 PTGER2P43116 358 aa12.24□□□□□ -0.45
CKLF-208ENST00000563092 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
CKLF-208ENST00000563092 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
CKLF-208ENST00000563092 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
CKLF-208ENST00000563092 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
CKLF-208ENST00000563092 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
CKLF-208ENST00000563092 COL18A1P39060 1754 aa12.23□□□□□ -0.45
CKLF-208ENST00000563092 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
CKLF-208ENST00000563092 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
CKLF-208ENST00000563092 MYOM1P52179 1685 aa12.21□□□□□ -0.45
CKLF-208ENST00000563092 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
CKLF-208ENST00000563092 DDB1Q16531 1140 aa12.2□□□□□ -0.46
CKLF-208ENST00000563092 MARCH10Q8NA82 808 aaPredicted RBP12.2□□□□□ -0.46
CKLF-208ENST00000563092 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
CKLF-208ENST00000563092 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
CKLF-208ENST00000563092 USP6P35125 1406 aa12.2□□□□□ -0.46
CKLF-208ENST00000563092 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
CKLF-208ENST00000563092 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
CKLF-208ENST00000563092 AXIN2Q9Y2T1 843 aa12.18□□□□□ -0.46
CKLF-208ENST00000563092 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
CKLF-208ENST00000563092 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
CKLF-208ENST00000563092 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
CKLF-208ENST00000563092 SYT17Q9BSW7 474 aa12.17□□□□□ -0.46
CKLF-208ENST00000563092 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
CKLF-208ENST00000563092 MAP3K5Q99683 1374 aa12.17□□□□□ -0.46
CKLF-208ENST00000563092 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
CKLF-208ENST00000563092 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
CKLF-208ENST00000563092 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
CKLF-208ENST00000563092 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
CKLF-208ENST00000563092 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
CKLF-208ENST00000563092 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
CKLF-208ENST00000563092 PAPPAQ13219 1627 aa12.15□□□□□ -0.46
CKLF-208ENST00000563092 NLRP6P59044 892 aa12.15□□□□□ -0.46
CKLF-208ENST00000563092 TOM1L2Q6ZVM7 507 aa12.15□□□□□ -0.46
CKLF-208ENST00000563092 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.46
CKLF-208ENST00000563092 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
CKLF-208ENST00000563092 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
CKLF-208ENST00000563092 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.47
CKLF-208ENST00000563092 CENPJQ9HC77 1338 aaPredicted RBP12.14□□□□□ -0.47
CKLF-208ENST00000563092 SRPK2P78362 688 aaKnown RBP12.14□□□□□ -0.47
CKLF-208ENST00000563092 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
CKLF-208ENST00000563092 ABCC6O95255 1503 aa12.14□□□□□ -0.47
CKLF-208ENST00000563092 AKAP12Q02952 1782 aa12.14□□□□□ -0.47
CKLF-208ENST00000563092 NFAT5O94916 1531 aa12.13□□□□□ -0.47
CKLF-208ENST00000563092 STK32BQ9NY57 414 aa12.13□□□□□ -0.47
CKLF-208ENST00000563092 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
CKLF-208ENST00000563092 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
CKLF-208ENST00000563092 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
CKLF-208ENST00000563092 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
CKLF-208ENST00000563092 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
CKLF-208ENST00000563092 QRICH2Q9H0J4 1663 aa12.12□□□□□ -0.47
CKLF-208ENST00000563092 CCDC7Q96M83 1385 aa12.11□□□□□ -0.47
CKLF-208ENST00000563092 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
CKLF-208ENST00000563092 EXOC5O00471 708 aa12.1□□□□□ -0.47
CKLF-208ENST00000563092 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
CKLF-208ENST00000563092 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
CKLF-208ENST00000563092 TTC21BQ7Z4L5 1316 aa12.1□□□□□ -0.47
CKLF-208ENST00000563092 COL24A1Q17RW2 1714 aa12.09□□□□□ -0.47
CKLF-208ENST00000563092 EVX2Q03828 476 aa12.09□□□□□ -0.47
CKLF-208ENST00000563092 ARXQ96QS3 562 aa12.09□□□□□ -0.47
CKLF-208ENST00000563092 CHD4Q14839 1912 aa12.09□□□□□ -0.47
CKLF-208ENST00000563092 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
CKLF-208ENST00000563092 RGPD5Q99666 1765 aa12.08□□□□□ -0.48
CKLF-208ENST00000563092 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
CKLF-208ENST00000563092 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
CKLF-208ENST00000563092 CEP350Q5VT06 3117 aa12.07□□□□□ -0.48
CKLF-208ENST00000563092 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
CKLF-208ENST00000563092 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms