RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 NLRP6P59044 892 aa29.29■■■□□ 2.28
PDXDC1-207ENST00000562119 SLIT3O75094 1523 aa29.29■■■□□ 2.28
PDXDC1-207ENST00000562119 BRD4O60885 1362 aaPredicted RBP29.28■■■□□ 2.28
PDXDC1-207ENST00000562119 AXIN2Q9Y2T1 843 aa29.28■■■□□ 2.28
PDXDC1-207ENST00000562119 MYOM1P52179 1685 aa29.27■■■□□ 2.28
PDXDC1-207ENST00000562119 USP6P35125 1406 aa29.27■■■□□ 2.28
PDXDC1-207ENST00000562119 ZNF784Q8NCA9 323 aaPredicted RBP29.26■■■□□ 2.27
PDXDC1-207ENST00000562119 ATF5Q9Y2D1 282 aaPredicted RBP29.26■■■□□ 2.27
PDXDC1-207ENST00000562119 BCL9O00512 1426 aa29.26■■■□□ 2.27
PDXDC1-207ENST00000562119 CABP1Q9NZU7 370 aa29.25■■■□□ 2.27
PDXDC1-207ENST00000562119 KIAA1210Q9ULL0 1709 aa29.25■■■□□ 2.27
PDXDC1-207ENST00000562119 WDR17Q8IZU2 1322 aa29.24■■■□□ 2.27
PDXDC1-207ENST00000562119 COL18A1P39060 1754 aa29.24■■■□□ 2.27
PDXDC1-207ENST00000562119 CENPJQ9HC77 1338 aaPredicted RBP29.22■■■□□ 2.27
PDXDC1-207ENST00000562119 TXNRD1Q16881 649 aa29.21■■■□□ 2.27
PDXDC1-207ENST00000562119 WNK3Q9BYP7 1800 aa29.2■■■□□ 2.27
PDXDC1-207ENST00000562119 SYT17Q9BSW7 474 aa29.2■■■□□ 2.26
PDXDC1-207ENST00000562119 CDCA7Q9BWT1 371 aaPredicted RBP29.2■■■□□ 2.26
PDXDC1-207ENST00000562119 PIK3C2AO00443 1686 aa29.19■■■□□ 2.26
PDXDC1-207ENST00000562119 FHDC1Q9C0D6 1143 aaPredicted RBP29.19■■■□□ 2.26
PDXDC1-207ENST00000562119 STK32BQ9NY57 414 aa29.19■■■□□ 2.26
PDXDC1-207ENST00000562119 SLC15A2Q16348 729 aa29.18■■■□□ 2.26
PDXDC1-207ENST00000562119 CPSF1Q10570 1443 aaKnown RBP29.18■■■□□ 2.26
PDXDC1-207ENST00000562119 ARHGEF25Q86VW2 580 aa29.17■■■□□ 2.26
PDXDC1-207ENST00000562119 SGIP1Q9BQI5 828 aa29.15■■■□□ 2.26
PDXDC1-207ENST00000562119 CARD10Q9BWT7 1032 aa29.15■■■□□ 2.26
PDXDC1-207ENST00000562119 AKAP12Q02952 1782 aa29.15■■■□□ 2.26
PDXDC1-207ENST00000562119 MTFR1LQ9H019 292 aa29.13■■■□□ 2.25
PDXDC1-207ENST00000562119 QRICH2Q9H0J4 1663 aa29.12■■■□□ 2.25
PDXDC1-207ENST00000562119 EXOC5O00471 708 aa29.11■■■□□ 2.25
PDXDC1-207ENST00000562119 CSB-PGBD3P0DP91 1061 aa29.11■■■□□ 2.25
PDXDC1-207ENST00000562119 SOX12O15370 315 aa29.1■■■□□ 2.25
PDXDC1-207ENST00000562119 KCNH5Q8NCM2 988 aa29.08■■■□□ 2.25
PDXDC1-207ENST00000562119 TTC21BQ7Z4L5 1316 aa29.08■■■□□ 2.25
PDXDC1-207ENST00000562119 RGPD5Q99666 1765 aa29.08■■■□□ 2.25
PDXDC1-207ENST00000562119 TNS2Q63HR2 1409 aa29.06■■■□□ 2.24
PDXDC1-207ENST00000562119 CCDC7Q96M83 1385 aa29.04■■■□□ 2.24
PDXDC1-207ENST00000562119 SENP3-EIF4A1A0A087X0R7 540 aa29.04■■■□□ 2.24
PDXDC1-207ENST00000562119 ARXQ96QS3 562 aa29.04■■■□□ 2.24
PDXDC1-207ENST00000562119 TRPM1Q7Z4N2 1603 aa29.04■■■□□ 2.24
PDXDC1-207ENST00000562119 NFAT5O94916 1531 aa29.04■■■□□ 2.24
PDXDC1-207ENST00000562119 C1QTNF8P60827 252 aa29.03■■■□□ 2.24
PDXDC1-207ENST00000562119 ACSBG1Q96GR2 724 aa29.03■■■□□ 2.24
PDXDC1-207ENST00000562119 EVC2Q86UK5 1308 aa29.02■■■□□ 2.24
PDXDC1-207ENST00000562119 ZNF692Q9BU19 519 aaPredicted RBP29.02■■■□□ 2.24
PDXDC1-207ENST00000562119 NHSQ6T4R5 1651 aa29.02■■■□□ 2.24
PDXDC1-207ENST00000562119 PAPPAQ13219 1627 aa29.01■■■□□ 2.23
PDXDC1-207ENST00000562119 GOLGB1Q14789 3259 aaKnown RBP29■■■□□ 2.23
PDXDC1-207ENST00000562119 MAP3K5Q99683 1374 aa29■■■□□ 2.23
PDXDC1-207ENST00000562119 TTC21AQ8NDW8 1320 aa28.99■■■□□ 2.23
PDXDC1-207ENST00000562119 CHD4Q14839 1912 aa28.98■■■□□ 2.23
PDXDC1-207ENST00000562119 ZNF827Q17R98 1081 aa28.98■■■□□ 2.23
PDXDC1-207ENST00000562119 ABCC6O95255 1503 aa28.96■■■□□ 2.23
PDXDC1-207ENST00000562119 LRRC4BQ9NT99 713 aa28.95■■■□□ 2.22
PDXDC1-207ENST00000562119 ERBB3P21860 1342 aa28.93■■■□□ 2.22
PDXDC1-207ENST00000562119 KTN1Q86UP2 1357 aaKnown RBP28.92■■■□□ 2.22
PDXDC1-207ENST00000562119 NLRP2Q9NX02 1062 aa28.92■■■□□ 2.22
PDXDC1-207ENST00000562119 GPR162Q16538 588 aa28.91■■■□□ 2.22
PDXDC1-207ENST00000562119 IL2RBP14784 551 aa28.9■■■□□ 2.22
PDXDC1-207ENST00000562119 BTAF1O14981 1849 aa28.9■■■□□ 2.22
PDXDC1-207ENST00000562119 L3MBTL2Q969R5 705 aa28.89■■■□□ 2.22
PDXDC1-207ENST00000562119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.87■■■□□ 2.21
PDXDC1-207ENST00000562119 AKT1S1Q96B36 256 aa28.87■■■□□ 2.21
PDXDC1-207ENST00000562119 CEP350Q5VT06 3117 aa28.86■■■□□ 2.21
PDXDC1-207ENST00000562119 USP31Q70CQ4 1352 aa28.86■■■□□ 2.21
PDXDC1-207ENST00000562119 KLHL34Q8N239 644 aa28.84■■■□□ 2.21
PDXDC1-207ENST00000562119 NME9Q86XW9 330 aa28.83■■■□□ 2.21
PDXDC1-207ENST00000562119 ANKRD24Q8TF21 1146 aa28.83■■■□□ 2.21
PDXDC1-207ENST00000562119 SLC16A10Q8TF71 515 aa28.83■■■□□ 2.21
PDXDC1-207ENST00000562119 PNPLA7Q6ZV29 1317 aa28.82■■■□□ 2.2
PDXDC1-207ENST00000562119 MON2Q7Z3U7 1717 aa28.82■■■□□ 2.2
PDXDC1-207ENST00000562119 GIGYF1O75420 1035 aaPredicted RBP28.81■■■□□ 2.2
PDXDC1-207ENST00000562119 USP54Q70EL1 1684 aa28.8■■■□□ 2.2
PDXDC1-207ENST00000562119 ROCK2O75116 1388 aaKnown RBP28.8■■■□□ 2.2
PDXDC1-207ENST00000562119 SBNO2Q9Y2G9 1366 aa28.8■■■□□ 2.2
PDXDC1-207ENST00000562119 PELP1Q8IZL8 1130 aaKnown RBP28.8■■■□□ 2.2
PDXDC1-207ENST00000562119 POLD1P28340 1107 aa28.79■■■□□ 2.2
PDXDC1-207ENST00000562119 SLC27A3Q5K4L6 730 aa28.79■■■□□ 2.2
PDXDC1-207ENST00000562119 NLGN2Q8NFZ4 835 aa28.79■■■□□ 2.2
PDXDC1-207ENST00000562119 CD163L1Q9NR16 1453 aa28.78■■■□□ 2.2
PDXDC1-207ENST00000562119 KCNQ4P56696 695 aa28.78■■■□□ 2.2
PDXDC1-207ENST00000562119 LTN1O94822 1766 aa28.78■■■□□ 2.2
PDXDC1-207ENST00000562119 COL24A1Q17RW2 1714 aa28.77■■■□□ 2.2
PDXDC1-207ENST00000562119 DDX54Q8TDD1 881 aaKnown RBP28.76■■■□□ 2.19
PDXDC1-207ENST00000562119 QSER1Q2KHR3 1735 aa28.76■■■□□ 2.19
PDXDC1-207ENST00000562119 IFFO2Q5TF58 517 aa28.75■■■□□ 2.19
PDXDC1-207ENST00000562119 TFCP2L1Q9NZI6 479 aa28.75■■■□□ 2.19
PDXDC1-207ENST00000562119 SHANK3Q9BYB0 1731 aa28.74■■■□□ 2.19
PDXDC1-207ENST00000562119 KAT6BQ8WYB5 2073 aa28.73■■■□□ 2.19
PDXDC1-207ENST00000562119 YBX3P16989 372 aaKnown RBP eCLIP28.71■■■□□ 2.19
PDXDC1-207ENST00000562119 SIN3AQ96ST3 1273 aa28.71■■■□□ 2.19
PDXDC1-207ENST00000562119 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
PDXDC1-207ENST00000562119 PRIM1P49642 420 aaKnown RBP28.7■■■□□ 2.18
PDXDC1-207ENST00000562119 SYTL4Q96C24 671 aaPredicted RBP28.7■■■□□ 2.18
PDXDC1-207ENST00000562119 NSD2O96028 1365 aa28.68■■■□□ 2.18
PDXDC1-207ENST00000562119 TMC1Q8TDI8 760 aa28.68■■■□□ 2.18
PDXDC1-207ENST00000562119 IP6K1Q92551 441 aa28.68■■■□□ 2.18
PDXDC1-207ENST00000562119 SLC12A5Q9H2X9 1139 aa28.68■■■□□ 2.18
PDXDC1-207ENST00000562119 ANKRD36BQ8N2N9 1353 aa28.67■■■□□ 2.18
PDXDC1-207ENST00000562119 LTV1Q96GA3 475 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms