RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
GINS3-204ENST00000561952 COL5A2P05997 1499 aaPredicted RBP11.7□□□□□ -0.54
GINS3-204ENST00000561952 CPDO75976 1380 aa11.7□□□□□ -0.54
GINS3-204ENST00000561952 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
GINS3-204ENST00000561952 TTC21BQ7Z4L5 1316 aa11.7□□□□□ -0.54
GINS3-204ENST00000561952 TMC1Q8TDI8 760 aa11.7□□□□□ -0.54
GINS3-204ENST00000561952 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
GINS3-204ENST00000561952 BAG6P46379 1132 aa11.69□□□□□ -0.54
GINS3-204ENST00000561952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
GINS3-204ENST00000561952 WNK3Q9BYP7 1800 aa11.68□□□□□ -0.54
GINS3-204ENST00000561952 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
GINS3-204ENST00000561952 COL18A1P39060 1754 aa11.68□□□□□ -0.54
GINS3-204ENST00000561952 TRIM37O94972 964 aa11.67□□□□□ -0.54
GINS3-204ENST00000561952 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
GINS3-204ENST00000561952 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
GINS3-204ENST00000561952 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
GINS3-204ENST00000561952 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
GINS3-204ENST00000561952 LTN1O94822 1766 aa11.67□□□□□ -0.54
GINS3-204ENST00000561952 PARP4Q9UKK3 1724 aaKnown RBP11.66□□□□□ -0.54
GINS3-204ENST00000561952 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
GINS3-204ENST00000561952 TOM1L2Q6ZVM7 507 aa11.66□□□□□ -0.54
GINS3-204ENST00000561952 LRRC37A3O60309 1634 aa11.66□□□□□ -0.54
GINS3-204ENST00000561952 CRB1P82279 1406 aa11.66□□□□□ -0.54
GINS3-204ENST00000561952 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
GINS3-204ENST00000561952 NFAT5O94916 1531 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 BARGINQ6ZT62 677 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 NME9Q86XW9 330 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
GINS3-204ENST00000561952 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
GINS3-204ENST00000561952 AATKQ6ZMQ8 1374 aa11.65□□□□□ -0.55
GINS3-204ENST00000561952 ST20-MTHFSA0A0A6YYL1 179 aa11.64□□□□□ -0.55
GINS3-204ENST00000561952 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
GINS3-204ENST00000561952 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
GINS3-204ENST00000561952 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
GINS3-204ENST00000561952 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
GINS3-204ENST00000561952 EZH2Q15910 746 aaKnown RBP11.63□□□□□ -0.55
GINS3-204ENST00000561952 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
GINS3-204ENST00000561952 KCNH5Q8NCM2 988 aa11.63□□□□□ -0.55
GINS3-204ENST00000561952 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
GINS3-204ENST00000561952 APBA3O96018 575 aa11.62□□□□□ -0.55
GINS3-204ENST00000561952 ARHGEF25Q86VW2 580 aa11.62□□□□□ -0.55
GINS3-204ENST00000561952 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
GINS3-204ENST00000561952 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
GINS3-204ENST00000561952 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
GINS3-204ENST00000561952 SBF2Q86WG5 1849 aa11.61□□□□□ -0.55
GINS3-204ENST00000561952 USP47Q96K76 1375 aa11.61□□□□□ -0.55
GINS3-204ENST00000561952 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
GINS3-204ENST00000561952 NUP188Q5SRE5 1749 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 RREB1Q92766 1687 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 R3HDM1Q15032 1099 aaKnown RBP11.6□□□□□ -0.55
GINS3-204ENST00000561952 DDB1Q16531 1140 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 TESK2Q96S53 571 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 TERF2IPQ9NYB0 399 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 PEAK1Q9H792 1746 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 OVOS2A0A0G2JMS6 1433 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 OVOS2A0A0J9YW53 1432 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 DISP2A7MBM2 1401 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 OVOS2Q6IE36 1432 aa11.6□□□□□ -0.55
GINS3-204ENST00000561952 USP31Q70CQ4 1352 aa11.58□□□□□ -0.56
GINS3-204ENST00000561952 ABCC6O95255 1503 aa11.57□□□□□ -0.56
GINS3-204ENST00000561952 KAT6BQ8WYB5 2073 aa11.57□□□□□ -0.56
GINS3-204ENST00000561952 HAX1O00165 279 aa11.57□□□□□ -0.56
GINS3-204ENST00000561952 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
GINS3-204ENST00000561952 CAMKK2Q96RR4 588 aa11.57□□□□□ -0.56
GINS3-204ENST00000561952 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
GINS3-204ENST00000561952 LRP5O75197 1615 aa11.57□□□□□ -0.56
GINS3-204ENST00000561952 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
GINS3-204ENST00000561952 TMF1P82094 1093 aa11.56□□□□□ -0.56
GINS3-204ENST00000561952 CARD10Q9BWT7 1032 aa11.56□□□□□ -0.56
GINS3-204ENST00000561952 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
GINS3-204ENST00000561952 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
GINS3-204ENST00000561952 FBLN1P23142 703 aa11.55□□□□□ -0.56
GINS3-204ENST00000561952 PTF1AQ7RTS3 328 aa11.55□□□□□ -0.56
GINS3-204ENST00000561952 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
GINS3-204ENST00000561952 ANKRD24Q8TF21 1146 aa11.55□□□□□ -0.56
GINS3-204ENST00000561952 MYOM1P52179 1685 aa11.55□□□□□ -0.56
GINS3-204ENST00000561952 ERBB3P21860 1342 aa11.55□□□□□ -0.56
GINS3-204ENST00000561952 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
GINS3-204ENST00000561952 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
GINS3-204ENST00000561952 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
GINS3-204ENST00000561952 TNS2Q63HR2 1409 aa11.54□□□□□ -0.56
GINS3-204ENST00000561952 COG3Q96JB2 828 aa11.54□□□□□ -0.56
GINS3-204ENST00000561952 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
GINS3-204ENST00000561952 EXOC5O00471 708 aa11.53□□□□□ -0.56
GINS3-204ENST00000561952 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
GINS3-204ENST00000561952 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
GINS3-204ENST00000561952 PARD3Q8TEW0 1356 aa11.53□□□□□ -0.56
GINS3-204ENST00000561952 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.56
GINS3-204ENST00000561952 ACSBG1Q96GR2 724 aa11.52□□□□□ -0.57
GINS3-204ENST00000561952 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
GINS3-204ENST00000561952 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
GINS3-204ENST00000561952 RGPD3A6NKT7 1758 aaPredicted RBP11.51□□□□□ -0.57
GINS3-204ENST00000561952 RGPD4Q7Z3J3 1758 aa11.51□□□□□ -0.57
GINS3-204ENST00000561952 IL2RBP14784 551 aa11.51□□□□□ -0.57
GINS3-204ENST00000561952 AMPHP49418 695 aa11.51□□□□□ -0.57
GINS3-204ENST00000561952 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
GINS3-204ENST00000561952 RRS1Q15050 365 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms