RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
USB1-204ENST00000561568 RXRBP28702 533 aa22.22■■□□□ 1.15
USB1-204ENST00000561568 GJD4Q96KN9 370 aaPredicted RBP22.22■■□□□ 1.15
USB1-204ENST00000561568 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
USB1-204ENST00000561568 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
USB1-204ENST00000561568 CAMTA1Q9Y6Y1 1673 aa22.21■■□□□ 1.15
USB1-204ENST00000561568 HOXC9P31274 260 aa22.21■■□□□ 1.15
USB1-204ENST00000561568 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
USB1-204ENST00000561568 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
USB1-204ENST00000561568 NWD2Q9ULI1 1742 aa22.2■■□□□ 1.14
USB1-204ENST00000561568 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
USB1-204ENST00000561568 EMILIN1Q9Y6C2 1016 aa22.19■■□□□ 1.14
USB1-204ENST00000561568 ABCC6O95255 1503 aa22.18■■□□□ 1.14
USB1-204ENST00000561568 ATRNO75882 1429 aa22.18■■□□□ 1.14
USB1-204ENST00000561568 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
USB1-204ENST00000561568 RTL1A6NKG5 1358 aa22.18■■□□□ 1.14
USB1-204ENST00000561568 CSB-PGBD3P0DP91 1061 aa22.18■■□□□ 1.14
USB1-204ENST00000561568 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
USB1-204ENST00000561568 ANKRD26Q9UPS8 1709 aa22.17■■□□□ 1.14
USB1-204ENST00000561568 ANKRD24Q8TF21 1146 aa22.17■■□□□ 1.14
USB1-204ENST00000561568 COL18A1P39060 1754 aa22.17■■□□□ 1.14
USB1-204ENST00000561568 PLCH1Q4KWH8 1693 aa22.17■■□□□ 1.14
USB1-204ENST00000561568 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
USB1-204ENST00000561568 FLT4P35916 1363 aa22.16■■□□□ 1.14
USB1-204ENST00000561568 SPATA31A5Q5VU36 1347 aa22.16■■□□□ 1.14
USB1-204ENST00000561568 SPATA31A7Q8IWB4 1347 aa22.16■■□□□ 1.14
USB1-204ENST00000561568 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
USB1-204ENST00000561568 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
USB1-204ENST00000561568 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
USB1-204ENST00000561568 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
USB1-204ENST00000561568 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.14
USB1-204ENST00000561568 INSRP06213 1382 aa22.14■■□□□ 1.14
USB1-204ENST00000561568 ERBB3P21860 1342 aa22.14■■□□□ 1.14
USB1-204ENST00000561568 THRAP3Q9Y2W1 955 aaKnown RBP22.14■■□□□ 1.13
USB1-204ENST00000561568 LTN1O94822 1766 aa22.14■■□□□ 1.13
USB1-204ENST00000561568 SPATA31A1Q5TZJ5 1347 aa22.13■■□□□ 1.13
USB1-204ENST00000561568 MTHFSP49914 203 aa22.13■■□□□ 1.13
USB1-204ENST00000561568 RALBP1Q15311 655 aa22.13■■□□□ 1.13
USB1-204ENST00000561568 LTV1Q96GA3 475 aaPredicted RBP22.13■■□□□ 1.13
USB1-204ENST00000561568 CARD10Q9BWT7 1032 aa22.13■■□□□ 1.13
USB1-204ENST00000561568 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
USB1-204ENST00000561568 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
USB1-204ENST00000561568 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
USB1-204ENST00000561568 NLRP2Q9NX02 1062 aa22.12■■□□□ 1.13
USB1-204ENST00000561568 USP35Q9P2H5 1018 aa22.12■■□□□ 1.13
USB1-204ENST00000561568 CRB1P82279 1406 aa22.12■■□□□ 1.13
USB1-204ENST00000561568 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
USB1-204ENST00000561568 NRAPQ86VF7 1730 aa22.1■■□□□ 1.13
USB1-204ENST00000561568 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
USB1-204ENST00000561568 SMG6Q86US8 1419 aaKnown RBP22.08■■□□□ 1.13
USB1-204ENST00000561568 RGPD5Q99666 1765 aa22.08■■□□□ 1.13
USB1-204ENST00000561568 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
USB1-204ENST00000561568 PARD3Q8TEW0 1356 aa22.07■■□□□ 1.12
USB1-204ENST00000561568 CDCA7Q9BWT1 371 aaPredicted RBP22.06■■□□□ 1.12
USB1-204ENST00000561568 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
USB1-204ENST00000561568 NBPF6Q5VWK0 638 aa22.05■■□□□ 1.12
USB1-204ENST00000561568 NBPF4Q96M43 638 aa22.05■■□□□ 1.12
USB1-204ENST00000561568 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
USB1-204ENST00000561568 CDK12Q9NYV4 1490 aaPredicted RBP22.04■■□□□ 1.12
USB1-204ENST00000561568 SEPT12Q8IYM1 358 aa22.04■■□□□ 1.12
USB1-204ENST00000561568 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
USB1-204ENST00000561568 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
USB1-204ENST00000561568 A0A0G2JS52 829 aa22.03■■□□□ 1.12
USB1-204ENST00000561568 MYT1Q01538 1121 aa22.03■■□□□ 1.12
USB1-204ENST00000561568 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
USB1-204ENST00000561568 GLI3P10071 1580 aa22.02■■□□□ 1.12
USB1-204ENST00000561568 EYA1Q99502 592 aa22.01■■□□□ 1.11
USB1-204ENST00000561568 ANP32CO43423 234 aa22■■□□□ 1.11
USB1-204ENST00000561568 IL2RBP14784 551 aa22■■□□□ 1.11
USB1-204ENST00000561568 IL13P35225 146 aa22■■□□□ 1.11
USB1-204ENST00000561568 ILDR2Q71H61 639 aa21.99■■□□□ 1.11
USB1-204ENST00000561568 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
USB1-204ENST00000561568 EXOC5O00471 708 aa21.98■■□□□ 1.11
USB1-204ENST00000561568 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
USB1-204ENST00000561568 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
USB1-204ENST00000561568 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
USB1-204ENST00000561568 PDE3BQ13370 1112 aa21.96■■□□□ 1.11
USB1-204ENST00000561568 DDB1Q16531 1140 aa21.96■■□□□ 1.11
USB1-204ENST00000561568 KRT27Q7Z3Y8 459 aa21.95■■□□□ 1.1
USB1-204ENST00000561568 USHBP1Q8N6Y0 703 aa21.95■■□□□ 1.1
USB1-204ENST00000561568 RGS12O14924 1447 aa21.95■■□□□ 1.1
USB1-204ENST00000561568 TATP17735 454 aaPredicted RBP21.94■■□□□ 1.1
USB1-204ENST00000561568 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
USB1-204ENST00000561568 DISP2A7MBM2 1401 aa21.91■■□□□ 1.1
USB1-204ENST00000561568 U2SURPO15042 1029 aaKnown RBP21.91■■□□□ 1.1
USB1-204ENST00000561568 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
USB1-204ENST00000561568 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
USB1-204ENST00000561568 NCAPD2Q15021 1401 aa21.89■■□□□ 1.1
USB1-204ENST00000561568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
USB1-204ENST00000561568 RGPD2P0DJD1 1756 aa21.88■■□□□ 1.09
USB1-204ENST00000561568 THSD7AQ9UPZ6 1657 aa21.88■■□□□ 1.09
USB1-204ENST00000561568 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
USB1-204ENST00000561568 COL3A1P02461 1466 aaPredicted RBP21.87■■□□□ 1.09
USB1-204ENST00000561568 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
USB1-204ENST00000561568 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
USB1-204ENST00000561568 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
USB1-204ENST00000561568 KDRP35968 1356 aa21.86■■□□□ 1.09
USB1-204ENST00000561568 HMOX1P09601 288 aa21.85■■□□□ 1.09
USB1-204ENST00000561568 AMOTQ4VCS5 1084 aa21.85■■□□□ 1.09
USB1-204ENST00000561568 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms