RNA–Protein interactions for RNA: ENST00000561298.1

PKNOX2-213, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-213ENST00000561298 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
PKNOX2-213ENST00000561298 FAM208AQ9UK61 1670 aaKnown RBP13.04□□□□□ -0.32
PKNOX2-213ENST00000561298 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
PKNOX2-213ENST00000561298 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
PKNOX2-213ENST00000561298 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
PKNOX2-213ENST00000561298 BTG4Q9NY30 223 aa13.02□□□□□ -0.33
PKNOX2-213ENST00000561298 USP21Q9UK80 565 aa13.02□□□□□ -0.33
PKNOX2-213ENST00000561298 ANP32CO43423 234 aa13.01□□□□□ -0.33
PKNOX2-213ENST00000561298 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
PKNOX2-213ENST00000561298 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
PKNOX2-213ENST00000561298 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
PKNOX2-213ENST00000561298 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
PKNOX2-213ENST00000561298 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 RTL1A6NKG5 1358 aa12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 ZBTB7CA1YPR0 619 aa12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
PKNOX2-213ENST00000561298 BLMP54132 1417 aaPredicted RBP12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 HOXC9P31274 260 aa12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 VPS72Q15906 364 aa12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 IP6K1Q92551 441 aa12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 QTRT2Q9H974 415 aaKnown RBP12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
PKNOX2-213ENST00000561298 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
PKNOX2-213ENST00000561298 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
PKNOX2-213ENST00000561298 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
PKNOX2-213ENST00000561298 MORC1Q86VD1 984 aa12.97□□□□□ -0.33
PKNOX2-213ENST00000561298 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
PKNOX2-213ENST00000561298 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
PKNOX2-213ENST00000561298 FLT4P35916 1363 aa12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 EP400Q96L91 3159 aa12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 ERBB3P21860 1342 aa12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 LARP1Q6PKG0 1096 aaKnown RBP12.96□□□□□ -0.33
PKNOX2-213ENST00000561298 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.34
PKNOX2-213ENST00000561298 RGS12O14924 1447 aa12.96□□□□□ -0.34
PKNOX2-213ENST00000561298 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 CRB1P82279 1406 aa12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 LRRC37A3O60309 1634 aa12.95□□□□□ -0.34
PKNOX2-213ENST00000561298 INSRP06213 1382 aa12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 AMPHP49418 695 aa12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 ILDR2Q71H61 639 aa12.94□□□□□ -0.34
PKNOX2-213ENST00000561298 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
PKNOX2-213ENST00000561298 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
PKNOX2-213ENST00000561298 DISP2A7MBM2 1401 aa12.92□□□□□ -0.34
PKNOX2-213ENST00000561298 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
PKNOX2-213ENST00000561298 PRKRIP1Q9H875 184 aaPredicted RBP12.92□□□□□ -0.34
PKNOX2-213ENST00000561298 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
PKNOX2-213ENST00000561298 RXRBP28702 533 aa12.91□□□□□ -0.34
PKNOX2-213ENST00000561298 EVA1CP58658 441 aa12.91□□□□□ -0.34
PKNOX2-213ENST00000561298 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
PKNOX2-213ENST00000561298 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
PKNOX2-213ENST00000561298 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
PKNOX2-213ENST00000561298 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
PKNOX2-213ENST00000561298 MTHFSP49914 203 aa12.9□□□□□ -0.34
PKNOX2-213ENST00000561298 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
PKNOX2-213ENST00000561298 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
PKNOX2-213ENST00000561298 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
PKNOX2-213ENST00000561298 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
PKNOX2-213ENST00000561298 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
PKNOX2-213ENST00000561298 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
PKNOX2-213ENST00000561298 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
PKNOX2-213ENST00000561298 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 TCP11L2Q8N4U5 519 aa12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 MEGF6O75095 1541 aa12.88□□□□□ -0.35
PKNOX2-213ENST00000561298 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
PKNOX2-213ENST00000561298 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
PKNOX2-213ENST00000561298 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
PKNOX2-213ENST00000561298 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
PKNOX2-213ENST00000561298 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
PKNOX2-213ENST00000561298 USHBP1Q8N6Y0 703 aa12.86□□□□□ -0.35
PKNOX2-213ENST00000561298 EYA1Q99502 592 aa12.86□□□□□ -0.35
PKNOX2-213ENST00000561298 IL13P35225 146 aa12.85□□□□□ -0.35
PKNOX2-213ENST00000561298 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
PKNOX2-213ENST00000561298 RALBP1Q15311 655 aa12.84□□□□□ -0.35
PKNOX2-213ENST00000561298 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
PKNOX2-213ENST00000561298 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
PKNOX2-213ENST00000561298 KDRP35968 1356 aa12.82□□□□□ -0.36
PKNOX2-213ENST00000561298 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
PKNOX2-213ENST00000561298 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
PKNOX2-213ENST00000561298 ITGB4P16144 1822 aa12.82□□□□□ -0.36
PKNOX2-213ENST00000561298 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
PKNOX2-213ENST00000561298 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms