RNA–Protein interactions for RNA: ENST00000561233.1

LINS1-213, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-213ENST00000561233 VPS72Q15906 364 aa9.93□□□□□ -0.82
LINS1-213ENST00000561233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINS1-213ENST00000561233 NRAPQ86VF7 1730 aa9.93□□□□□ -0.82
LINS1-213ENST00000561233 GLI3P10071 1580 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 TTC21AQ8NDW8 1320 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 SOX12O15370 315 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 GCP02774 474 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 SLC12A5Q9H2X9 1139 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 STRN4Q9NRL3 753 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
LINS1-213ENST00000561233 A0A1W2PP64 1363 aa9.91□□□□□ -0.82
LINS1-213ENST00000561233 NINLQ9Y2I6 1382 aa9.91□□□□□ -0.82
LINS1-213ENST00000561233 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
LINS1-213ENST00000561233 SLIT3O75094 1523 aa9.91□□□□□ -0.82
LINS1-213ENST00000561233 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
LINS1-213ENST00000561233 CPDO75976 1380 aa9.9□□□□□ -0.82
LINS1-213ENST00000561233 EVA1CP58658 441 aa9.9□□□□□ -0.82
LINS1-213ENST00000561233 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.82
LINS1-213ENST00000561233 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
LINS1-213ENST00000561233 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.83
LINS1-213ENST00000561233 CDCA8Q53HL2 280 aa9.89□□□□□ -0.83
LINS1-213ENST00000561233 NME9Q86XW9 330 aa9.89□□□□□ -0.83
LINS1-213ENST00000561233 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
LINS1-213ENST00000561233 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINS1-213ENST00000561233 POLR3GLQ9BT43 218 aa9.89□□□□□ -0.83
LINS1-213ENST00000561233 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
LINS1-213ENST00000561233 SPATA31A5Q5VU36 1347 aa9.88□□□□□ -0.83
LINS1-213ENST00000561233 SPATA31A7Q8IWB4 1347 aa9.88□□□□□ -0.83
LINS1-213ENST00000561233 EIF4G2P78344 907 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINS1-213ENST00000561233 KCNH5Q8NCM2 988 aa9.88□□□□□ -0.83
LINS1-213ENST00000561233 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
LINS1-213ENST00000561233 LMO7Q8WWI1 1683 aa9.87□□□□□ -0.83
LINS1-213ENST00000561233 CAMTA1Q9Y6Y1 1673 aa9.87□□□□□ -0.83
LINS1-213ENST00000561233 COL5A2P05997 1499 aaPredicted RBP9.87□□□□□ -0.83
LINS1-213ENST00000561233 ANKRD36BQ8N2N9 1353 aa9.87□□□□□ -0.83
LINS1-213ENST00000561233 SPATA31A1Q5TZJ5 1347 aa9.86□□□□□ -0.83
LINS1-213ENST00000561233 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
LINS1-213ENST00000561233 KRT27Q7Z3Y8 459 aa9.86□□□□□ -0.83
LINS1-213ENST00000561233 NFAT5O94916 1531 aa9.86□□□□□ -0.83
LINS1-213ENST00000561233 AATKQ6ZMQ8 1374 aa9.86□□□□□ -0.83
LINS1-213ENST00000561233 CSB-PGBD3P0DP91 1061 aa9.85□□□□□ -0.83
LINS1-213ENST00000561233 HSPA5P11021 654 aaKnown RBP9.85□□□□□ -0.83
LINS1-213ENST00000561233 USP31Q70CQ4 1352 aa9.85□□□□□ -0.83
LINS1-213ENST00000561233 OVOS2A0A0J9YW53 1432 aa9.84□□□□□ -0.83
LINS1-213ENST00000561233 OVOS2Q6IE36 1432 aa9.84□□□□□ -0.83
LINS1-213ENST00000561233 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
LINS1-213ENST00000561233 TOM1L2Q6ZVM7 507 aa9.84□□□□□ -0.83
LINS1-213ENST00000561233 ARHGEF25Q86VW2 580 aa9.84□□□□□ -0.83
LINS1-213ENST00000561233 COG3Q96JB2 828 aa9.84□□□□□ -0.83
LINS1-213ENST00000561233 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
LINS1-213ENST00000561233 THSD7AQ9UPZ6 1657 aa9.83□□□□□ -0.84
LINS1-213ENST00000561233 CRB1P82279 1406 aa9.83□□□□□ -0.84
LINS1-213ENST00000561233 TCP11L2Q8N4U5 519 aa9.83□□□□□ -0.84
LINS1-213ENST00000561233 BRWD3Q6RI45 1802 aa9.83□□□□□ -0.84
LINS1-213ENST00000561233 MYOM1P52179 1685 aa9.83□□□□□ -0.84
LINS1-213ENST00000561233 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
LINS1-213ENST00000561233 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
LINS1-213ENST00000561233 GGNBP2Q9H3C7 697 aa9.82□□□□□ -0.84
LINS1-213ENST00000561233 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
LINS1-213ENST00000561233 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
LINS1-213ENST00000561233 ABCC6O95255 1503 aa9.82□□□□□ -0.84
LINS1-213ENST00000561233 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
LINS1-213ENST00000561233 FAM182BQ5T319 152 aa9.81□□□□□ -0.84
LINS1-213ENST00000561233 BARGINQ6ZT62 677 aa9.81□□□□□ -0.84
LINS1-213ENST00000561233 THRAP3Q9Y2W1 955 aaKnown RBP9.81□□□□□ -0.84
LINS1-213ENST00000561233 BLMP54132 1417 aaPredicted RBP9.81□□□□□ -0.84
LINS1-213ENST00000561233 COL18A1P39060 1754 aa9.8□□□□□ -0.84
LINS1-213ENST00000561233 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
LINS1-213ENST00000561233 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
LINS1-213ENST00000561233 LTN1O94822 1766 aa9.8□□□□□ -0.84
LINS1-213ENST00000561233 FYB1O15117 783 aa9.79□□□□□ -0.84
LINS1-213ENST00000561233 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
LINS1-213ENST00000561233 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
LINS1-213ENST00000561233 ERBB3P21860 1342 aa9.79□□□□□ -0.84
LINS1-213ENST00000561233 ATXN8OSP0DMR3 200 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 FBLN1P23142 703 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 AMPHP49418 695 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 ANKRD24Q8TF21 1146 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 LTV1Q96GA3 475 aaPredicted RBP9.78□□□□□ -0.84
LINS1-213ENST00000561233 CARD14Q9BXL6 1004 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 CGNL1Q0VF96 1302 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 MAP3K19Q56UN5 1328 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 RGPD5Q99666 1765 aa9.78□□□□□ -0.84
LINS1-213ENST00000561233 CCDC7Q96M83 1385 aa9.77□□□□□ -0.84
LINS1-213ENST00000561233 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.85
LINS1-213ENST00000561233 DDB1Q16531 1140 aa9.77□□□□□ -0.85
LINS1-213ENST00000561233 CHADLQ6NUI6 762 aa9.77□□□□□ -0.85
LINS1-213ENST00000561233 FAM196AQ6ZSG2 479 aa9.77□□□□□ -0.85
LINS1-213ENST00000561233 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.85
LINS1-213ENST00000561233 LRRC37A3O60309 1634 aa9.77□□□□□ -0.85
LINS1-213ENST00000561233 EP400Q96L91 3159 aa9.77□□□□□ -0.85
LINS1-213ENST00000561233 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
LINS1-213ENST00000561233 BAG6P46379 1132 aa9.76□□□□□ -0.85
LINS1-213ENST00000561233 DEFB132Q7Z7B7 95 aa9.76□□□□□ -0.85
LINS1-213ENST00000561233 IP6K1Q92551 441 aa9.76□□□□□ -0.85
LINS1-213ENST00000561233 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
LINS1-213ENST00000561233 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
LINS1-213ENST00000561233 WNK3Q9BYP7 1800 aa9.75□□□□□ -0.85
LINS1-213ENST00000561233 OVOS2A0A0G2JMS6 1433 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms