RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 PYGBP11216 843 aa11.82□□□□□ -0.52
MARK3-225ENST00000561225 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
MARK3-225ENST00000561225 CAMKK2Q96RR4 588 aa11.82□□□□□ -0.52
MARK3-225ENST00000561225 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
MARK3-225ENST00000561225 NRXN1Q9ULB1 1477 aa11.82□□□□□ -0.52
MARK3-225ENST00000561225 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
MARK3-225ENST00000561225 TMEM132EQ6IEE7 984 aa11.81□□□□□ -0.52
MARK3-225ENST00000561225 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
MARK3-225ENST00000561225 SNPHO15079 494 aa11.8□□□□□ -0.52
MARK3-225ENST00000561225 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
MARK3-225ENST00000561225 THSD7AQ9UPZ6 1657 aa11.8□□□□□ -0.52
MARK3-225ENST00000561225 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
MARK3-225ENST00000561225 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
MARK3-225ENST00000561225 ADGRB2O60241 1585 aa11.79□□□□□ -0.52
MARK3-225ENST00000561225 PARD3Q8TEW0 1356 aa11.79□□□□□ -0.52
MARK3-225ENST00000561225 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
MARK3-225ENST00000561225 TRIM37O94972 964 aa11.78□□□□□ -0.52
MARK3-225ENST00000561225 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.52
MARK3-225ENST00000561225 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.52
MARK3-225ENST00000561225 SIRT1Q96EB6 747 aa11.77□□□□□ -0.53
MARK3-225ENST00000561225 IFT172Q9UG01 1749 aa11.77□□□□□ -0.53
MARK3-225ENST00000561225 PIK3C2GO75747 1445 aa11.77□□□□□ -0.53
MARK3-225ENST00000561225 APBA3O96018 575 aa11.76□□□□□ -0.53
MARK3-225ENST00000561225 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
MARK3-225ENST00000561225 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
MARK3-225ENST00000561225 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
MARK3-225ENST00000561225 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
MARK3-225ENST00000561225 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
MARK3-225ENST00000561225 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
MARK3-225ENST00000561225 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
MARK3-225ENST00000561225 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
MARK3-225ENST00000561225 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
MARK3-225ENST00000561225 SPATA31A1Q5TZJ5 1347 aa11.74□□□□□ -0.53
MARK3-225ENST00000561225 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
MARK3-225ENST00000561225 RREB1Q92766 1687 aa11.74□□□□□ -0.53
MARK3-225ENST00000561225 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
MARK3-225ENST00000561225 NBPF8Q3BBV2 869 aa11.73□□□□□ -0.53
MARK3-225ENST00000561225 NBPF14Q5TI25 921 aa11.73□□□□□ -0.53
MARK3-225ENST00000561225 ANKARQ7Z5J8 1434 aa11.73□□□□□ -0.53
MARK3-225ENST00000561225 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
MARK3-225ENST00000561225 SPON1Q9HCB6 807 aa11.73□□□□□ -0.53
MARK3-225ENST00000561225 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
MARK3-225ENST00000561225 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
MARK3-225ENST00000561225 KCNQ2O43526 872 aa11.72□□□□□ -0.53
MARK3-225ENST00000561225 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
MARK3-225ENST00000561225 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
MARK3-225ENST00000561225 PRDM11Q9NQV5 511 aa11.72□□□□□ -0.53
MARK3-225ENST00000561225 ACIN1Q9UKV3 1341 aaKnown RBP11.71□□□□□ -0.53
MARK3-225ENST00000561225 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.53
MARK3-225ENST00000561225 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
MARK3-225ENST00000561225 CRYBG1Q9Y4K1 1723 aa11.7□□□□□ -0.54
MARK3-225ENST00000561225 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
MARK3-225ENST00000561225 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
MARK3-225ENST00000561225 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
MARK3-225ENST00000561225 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
MARK3-225ENST00000561225 ZNF784Q8NCA9 323 aaPredicted RBP11.69□□□□□ -0.54
MARK3-225ENST00000561225 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
MARK3-225ENST00000561225 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 PDE3BQ13370 1112 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 CFAP70Q5T0N1 1121 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 BARGINQ6ZT62 677 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 USP35Q9P2H5 1018 aa11.68□□□□□ -0.54
MARK3-225ENST00000561225 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
MARK3-225ENST00000561225 CEP350Q5VT06 3117 aa11.66□□□□□ -0.54
MARK3-225ENST00000561225 DLC1Q96QB1 1528 aa11.66□□□□□ -0.54
MARK3-225ENST00000561225 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
MARK3-225ENST00000561225 HIRIP3Q9BW71 556 aaPredicted RBP11.66□□□□□ -0.54
MARK3-225ENST00000561225 POGKQ9P215 609 aa11.66□□□□□ -0.54
MARK3-225ENST00000561225 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
MARK3-225ENST00000561225 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
MARK3-225ENST00000561225 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
MARK3-225ENST00000561225 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.55
MARK3-225ENST00000561225 ZC3H6P61129 1189 aaKnown RBP11.64□□□□□ -0.55
MARK3-225ENST00000561225 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
MARK3-225ENST00000561225 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
MARK3-225ENST00000561225 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
MARK3-225ENST00000561225 NRKQ7Z2Y5 1582 aa11.63□□□□□ -0.55
MARK3-225ENST00000561225 EMP3P54852 163 aa11.63□□□□□ -0.55
MARK3-225ENST00000561225 LARP1Q6PKG0 1096 aaKnown RBP11.63□□□□□ -0.55
MARK3-225ENST00000561225 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
MARK3-225ENST00000561225 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
MARK3-225ENST00000561225 MINK1Q8N4C8 1332 aaPredicted RBP11.62□□□□□ -0.55
MARK3-225ENST00000561225 PHRF1Q9P1Y6 1649 aaKnown RBP11.62□□□□□ -0.55
MARK3-225ENST00000561225 WASLO00401 505 aaPredicted RBP11.62□□□□□ -0.55
MARK3-225ENST00000561225 EVA1CP58658 441 aa11.62□□□□□ -0.55
MARK3-225ENST00000561225 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
MARK3-225ENST00000561225 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
MARK3-225ENST00000561225 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
MARK3-225ENST00000561225 CASZ1Q86V15 1759 aa11.62□□□□□ -0.55
MARK3-225ENST00000561225 PLSCR1O15162 318 aa11.61□□□□□ -0.55
MARK3-225ENST00000561225 PTGER2P43116 358 aa11.61□□□□□ -0.55
MARK3-225ENST00000561225 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
MARK3-225ENST00000561225 TRAK1Q9UPV9 953 aa11.61□□□□□ -0.55
MARK3-225ENST00000561225 ATP7BP35670 1465 aa11.6□□□□□ -0.55
MARK3-225ENST00000561225 C11orf95C9JLR9 678 aaPredicted RBP11.6□□□□□ -0.55
MARK3-225ENST00000561225 ZBTB7AO95365 584 aa11.6□□□□□ -0.55
MARK3-225ENST00000561225 NUTM2GQ5VZR2 741 aa11.6□□□□□ -0.55
MARK3-225ENST00000561225 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms