RNA–Protein interactions for RNA: ENST00000561113.1

LHX4-203, Transcript of LIM homeobox 4, humanhuman

TSL 2

Gene LHX4, Length 603 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-203ENST00000561113 CCDC7Q96M83 1385 aa19.26■□□□□ 0.67
LHX4-203ENST00000561113 COL5A2P05997 1499 aaPredicted RBP19.26■□□□□ 0.67
LHX4-203ENST00000561113 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
LHX4-203ENST00000561113 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
LHX4-203ENST00000561113 FBLN1P23142 703 aa19.24■□□□□ 0.67
LHX4-203ENST00000561113 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
LHX4-203ENST00000561113 LARP1Q6PKG0 1096 aaKnown RBP19.23■□□□□ 0.67
LHX4-203ENST00000561113 USP35Q9P2H5 1018 aa19.23■□□□□ 0.67
LHX4-203ENST00000561113 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
LHX4-203ENST00000561113 ABCC6O95255 1503 aa19.22■□□□□ 0.67
LHX4-203ENST00000561113 A0A0G2JS52 829 aa19.22■□□□□ 0.67
LHX4-203ENST00000561113 MYT1Q01538 1121 aa19.22■□□□□ 0.67
LHX4-203ENST00000561113 SPATA31A5Q5VU36 1347 aa19.22■□□□□ 0.67
LHX4-203ENST00000561113 SPATA31A7Q8IWB4 1347 aa19.22■□□□□ 0.67
LHX4-203ENST00000561113 FAM98CQ17RN3 349 aaKnown RBP19.21■□□□□ 0.67
LHX4-203ENST00000561113 SOCS7O14512 581 aa19.2■□□□□ 0.66
LHX4-203ENST00000561113 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
LHX4-203ENST00000561113 WNK3Q9BYP7 1800 aa19.2■□□□□ 0.66
LHX4-203ENST00000561113 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
LHX4-203ENST00000561113 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
LHX4-203ENST00000561113 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
LHX4-203ENST00000561113 RGPD2P0DJD1 1756 aa19.19■□□□□ 0.66
LHX4-203ENST00000561113 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
LHX4-203ENST00000561113 KNSTRNQ9Y448 316 aa19.18■□□□□ 0.66
LHX4-203ENST00000561113 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
LHX4-203ENST00000561113 THSD7AQ9UPZ6 1657 aa19.17■□□□□ 0.66
LHX4-203ENST00000561113 CRB1P82279 1406 aa19.17■□□□□ 0.66
LHX4-203ENST00000561113 TOM1L2Q6ZVM7 507 aa19.17■□□□□ 0.66
LHX4-203ENST00000561113 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
LHX4-203ENST00000561113 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
LHX4-203ENST00000561113 AMPHP49418 695 aa19.16■□□□□ 0.66
LHX4-203ENST00000561113 WDR17Q8IZU2 1322 aa19.16■□□□□ 0.66
LHX4-203ENST00000561113 FAM208AQ9UK61 1670 aaKnown RBP19.15■□□□□ 0.66
LHX4-203ENST00000561113 TCP11L2Q8N4U5 519 aa19.14■□□□□ 0.65
LHX4-203ENST00000561113 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.65
LHX4-203ENST00000561113 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
LHX4-203ENST00000561113 HOXC9P31274 260 aa19.13■□□□□ 0.65
LHX4-203ENST00000561113 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
LHX4-203ENST00000561113 ANKRD24Q8TF21 1146 aa19.13■□□□□ 0.65
LHX4-203ENST00000561113 IP6K1Q92551 441 aa19.13■□□□□ 0.65
LHX4-203ENST00000561113 ERBB3P21860 1342 aa19.13■□□□□ 0.65
LHX4-203ENST00000561113 NSD2O96028 1365 aa19.13■□□□□ 0.65
LHX4-203ENST00000561113 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
LHX4-203ENST00000561113 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
LHX4-203ENST00000561113 ONECUT3O60422 494 aaPredicted RBP19.12■□□□□ 0.65
LHX4-203ENST00000561113 EMILIN1Q9Y6C2 1016 aa19.12■□□□□ 0.65
LHX4-203ENST00000561113 PARP4Q9UKK3 1724 aaKnown RBP19.11■□□□□ 0.65
LHX4-203ENST00000561113 NLRP2Q9NX02 1062 aa19.11■□□□□ 0.65
LHX4-203ENST00000561113 MORC1Q86VD1 984 aa19.1■□□□□ 0.65
LHX4-203ENST00000561113 EP400Q96L91 3159 aa19.1■□□□□ 0.65
LHX4-203ENST00000561113 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
LHX4-203ENST00000561113 FLT4P35916 1363 aa19.09■□□□□ 0.65
LHX4-203ENST00000561113 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
LHX4-203ENST00000561113 AMER1Q5JTC6 1135 aaPredicted RBP19.09■□□□□ 0.65
LHX4-203ENST00000561113 CC2D1BQ5T0F9 858 aaKnown RBP19.09■□□□□ 0.65
LHX4-203ENST00000561113 BARGINQ6ZT62 677 aa19.09■□□□□ 0.65
LHX4-203ENST00000561113 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
LHX4-203ENST00000561113 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
LHX4-203ENST00000561113 CARD10Q9BWT7 1032 aa19.08■□□□□ 0.64
LHX4-203ENST00000561113 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
LHX4-203ENST00000561113 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
LHX4-203ENST00000561113 FAM182BQ5T319 152 aa19.06■□□□□ 0.64
LHX4-203ENST00000561113 POLKQ9UBT6 870 aa19.05■□□□□ 0.64
LHX4-203ENST00000561113 INSRP06213 1382 aa19.05■□□□□ 0.64
LHX4-203ENST00000561113 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
LHX4-203ENST00000561113 UPF1Q92900 1129 aaKnown RBP eCLIP19.03■□□□□ 0.64
LHX4-203ENST00000561113 DISP2A7MBM2 1401 aa19.02■□□□□ 0.64
LHX4-203ENST00000561113 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
LHX4-203ENST00000561113 KAT6BQ8WYB5 2073 aa19.01■□□□□ 0.63
LHX4-203ENST00000561113 DDB1Q16531 1140 aa19.01■□□□□ 0.63
LHX4-203ENST00000561113 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
LHX4-203ENST00000561113 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
LHX4-203ENST00000561113 IL2RBP14784 551 aa18.99■□□□□ 0.63
LHX4-203ENST00000561113 NBPF6Q5VWK0 638 aa18.99■□□□□ 0.63
LHX4-203ENST00000561113 NBPF4Q96M43 638 aa18.99■□□□□ 0.63
LHX4-203ENST00000561113 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
LHX4-203ENST00000561113 SBF2Q86WG5 1849 aa18.98■□□□□ 0.63
LHX4-203ENST00000561113 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
LHX4-203ENST00000561113 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
LHX4-203ENST00000561113 TNS2Q63HR2 1409 aa18.98■□□□□ 0.63
LHX4-203ENST00000561113 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
LHX4-203ENST00000561113 MEGF6O75095 1541 aa18.96■□□□□ 0.63
LHX4-203ENST00000561113 TNS1Q9HBL0 1735 aaKnown RBP18.96■□□□□ 0.63
LHX4-203ENST00000561113 EXOC5O00471 708 aa18.95■□□□□ 0.62
LHX4-203ENST00000561113 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
LHX4-203ENST00000561113 OVOS2A0A0G2JMS6 1433 aa18.94■□□□□ 0.62
LHX4-203ENST00000561113 MTHFSP49914 203 aa18.94■□□□□ 0.62
LHX4-203ENST00000561113 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
LHX4-203ENST00000561113 MARCH10Q8NA82 808 aaPredicted RBP18.92■□□□□ 0.62
LHX4-203ENST00000561113 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
LHX4-203ENST00000561113 EYA1Q99502 592 aa18.92■□□□□ 0.62
LHX4-203ENST00000561113 TRIM37O94972 964 aa18.91■□□□□ 0.62
LHX4-203ENST00000561113 SF3B2Q13435 895 aaKnown RBP18.91■□□□□ 0.62
LHX4-203ENST00000561113 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
LHX4-203ENST00000561113 TATP17735 454 aaPredicted RBP18.89■□□□□ 0.61
LHX4-203ENST00000561113 CCDC125Q86Z20 511 aa18.89■□□□□ 0.61
LHX4-203ENST00000561113 DDX54Q8TDD1 881 aaKnown RBP18.89■□□□□ 0.61
LHX4-203ENST00000561113 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
LHX4-203ENST00000561113 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
LHX4-203ENST00000561113 ZCRB1Q8TBF4 217 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms