RNA–Protein interactions for RNA: ENST00000560663.5

MIR9-3HG-210, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-210ENST00000560663 LARP1Q6PKG0 1096 aaKnown RBP23.43■■□□□ 1.34
MIR9-3HG-210ENST00000560663 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
MIR9-3HG-210ENST00000560663 ONECUT3O60422 494 aaPredicted RBP23.42■■□□□ 1.34
MIR9-3HG-210ENST00000560663 SPATA31A1Q5TZJ5 1347 aa23.4■■□□□ 1.34
MIR9-3HG-210ENST00000560663 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
MIR9-3HG-210ENST00000560663 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.33
MIR9-3HG-210ENST00000560663 MAP3K19Q56UN5 1328 aa23.38■■□□□ 1.33
MIR9-3HG-210ENST00000560663 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
MIR9-3HG-210ENST00000560663 EVA1CP58658 441 aa23.37■■□□□ 1.33
MIR9-3HG-210ENST00000560663 RRS1Q15050 365 aaKnown RBP23.36■■□□□ 1.33
MIR9-3HG-210ENST00000560663 FAM98CQ17RN3 349 aaKnown RBP23.36■■□□□ 1.33
MIR9-3HG-210ENST00000560663 ABCC6O95255 1503 aa23.36■■□□□ 1.33
MIR9-3HG-210ENST00000560663 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
MIR9-3HG-210ENST00000560663 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
MIR9-3HG-210ENST00000560663 WDR17Q8IZU2 1322 aa23.34■■□□□ 1.33
MIR9-3HG-210ENST00000560663 IP6K1Q92551 441 aa23.34■■□□□ 1.33
MIR9-3HG-210ENST00000560663 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
MIR9-3HG-210ENST00000560663 HOXC9P31274 260 aa23.32■■□□□ 1.32
MIR9-3HG-210ENST00000560663 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
MIR9-3HG-210ENST00000560663 USP35Q9P2H5 1018 aa23.32■■□□□ 1.32
MIR9-3HG-210ENST00000560663 CRB1P82279 1406 aa23.32■■□□□ 1.32
MIR9-3HG-210ENST00000560663 ERBB3P21860 1342 aa23.32■■□□□ 1.32
MIR9-3HG-210ENST00000560663 BARGINQ6ZT62 677 aa23.3■■□□□ 1.32
MIR9-3HG-210ENST00000560663 TCP11L2Q8N4U5 519 aa23.3■■□□□ 1.32
MIR9-3HG-210ENST00000560663 NSD2O96028 1365 aa23.29■■□□□ 1.32
MIR9-3HG-210ENST00000560663 ANKRD24Q8TF21 1146 aa23.29■■□□□ 1.32
MIR9-3HG-210ENST00000560663 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
MIR9-3HG-210ENST00000560663 EMILIN1Q9Y6C2 1016 aa23.29■■□□□ 1.32
MIR9-3HG-210ENST00000560663 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
MIR9-3HG-210ENST00000560663 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
MIR9-3HG-210ENST00000560663 LTN1O94822 1766 aa23.28■■□□□ 1.32
MIR9-3HG-210ENST00000560663 TOM1L2Q6ZVM7 507 aa23.28■■□□□ 1.32
MIR9-3HG-210ENST00000560663 CARD10Q9BWT7 1032 aa23.28■■□□□ 1.32
MIR9-3HG-210ENST00000560663 RTL1A6NKG5 1358 aa23.27■■□□□ 1.32
MIR9-3HG-210ENST00000560663 EP400Q96L91 3159 aa23.27■■□□□ 1.32
MIR9-3HG-210ENST00000560663 PEAK1Q9H792 1746 aa23.26■■□□□ 1.31
MIR9-3HG-210ENST00000560663 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
MIR9-3HG-210ENST00000560663 AMPHP49418 695 aa23.26■■□□□ 1.31
MIR9-3HG-210ENST00000560663 POLKQ9UBT6 870 aa23.26■■□□□ 1.31
MIR9-3HG-210ENST00000560663 THRAP3Q9Y2W1 955 aaKnown RBP23.26■■□□□ 1.31
MIR9-3HG-210ENST00000560663 RGPD5Q99666 1765 aa23.26■■□□□ 1.31
MIR9-3HG-210ENST00000560663 HSP90AB2PQ58FF8 381 aa23.25■■□□□ 1.31
MIR9-3HG-210ENST00000560663 TNNT2P45379 298 aaPredicted RBP23.24■■□□□ 1.31
MIR9-3HG-210ENST00000560663 DISP2A7MBM2 1401 aa23.24■■□□□ 1.31
MIR9-3HG-210ENST00000560663 UPF1Q92900 1129 aaKnown RBP eCLIP23.23■■□□□ 1.31
MIR9-3HG-210ENST00000560663 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
MIR9-3HG-210ENST00000560663 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
MIR9-3HG-210ENST00000560663 KRT27Q7Z3Y8 459 aa23.22■■□□□ 1.31
MIR9-3HG-210ENST00000560663 INSRP06213 1382 aa23.22■■□□□ 1.31
MIR9-3HG-210ENST00000560663 FLT4P35916 1363 aa23.22■■□□□ 1.31
MIR9-3HG-210ENST00000560663 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
MIR9-3HG-210ENST00000560663 NLRP2Q9NX02 1062 aa23.21■■□□□ 1.31
MIR9-3HG-210ENST00000560663 ANKRD26Q9UPS8 1709 aa23.2■■□□□ 1.3
MIR9-3HG-210ENST00000560663 NPC1L1Q9UHC9 1359 aa23.2■■□□□ 1.3
MIR9-3HG-210ENST00000560663 A0A0G2JS52 829 aa23.2■■□□□ 1.3
MIR9-3HG-210ENST00000560663 MYT1Q01538 1121 aa23.2■■□□□ 1.3
MIR9-3HG-210ENST00000560663 SMG6Q86US8 1419 aaKnown RBP23.19■■□□□ 1.3
MIR9-3HG-210ENST00000560663 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
MIR9-3HG-210ENST00000560663 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
MIR9-3HG-210ENST00000560663 FAM182BQ5T319 152 aa23.18■■□□□ 1.3
MIR9-3HG-210ENST00000560663 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
MIR9-3HG-210ENST00000560663 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
MIR9-3HG-210ENST00000560663 PPM1GO15355 546 aaPredicted RBP23.16■■□□□ 1.3
MIR9-3HG-210ENST00000560663 CDCA7Q9BWT1 371 aaPredicted RBP23.13■■□□□ 1.29
MIR9-3HG-210ENST00000560663 USHBP1Q8N6Y0 703 aa23.12■■□□□ 1.29
MIR9-3HG-210ENST00000560663 PARP4Q9UKK3 1724 aaKnown RBP23.12■■□□□ 1.29
MIR9-3HG-210ENST00000560663 FAM208AQ9UK61 1670 aaKnown RBP23.12■■□□□ 1.29
MIR9-3HG-210ENST00000560663 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
MIR9-3HG-210ENST00000560663 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
MIR9-3HG-210ENST00000560663 LRRC37A3O60309 1634 aa23.11■■□□□ 1.29
MIR9-3HG-210ENST00000560663 NCAPD2Q15021 1401 aa23.1■■□□□ 1.29
MIR9-3HG-210ENST00000560663 IL2RBP14784 551 aa23.1■■□□□ 1.29
MIR9-3HG-210ENST00000560663 DDB1Q16531 1140 aa23.1■■□□□ 1.29
MIR9-3HG-210ENST00000560663 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
MIR9-3HG-210ENST00000560663 PDE3BQ13370 1112 aa23.09■■□□□ 1.29
MIR9-3HG-210ENST00000560663 WNK3Q9BYP7 1800 aa23.09■■□□□ 1.29
MIR9-3HG-210ENST00000560663 MEGF6O75095 1541 aa23.08■■□□□ 1.29
MIR9-3HG-210ENST00000560663 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
MIR9-3HG-210ENST00000560663 EYA1Q99502 592 aa23.08■■□□□ 1.29
MIR9-3HG-210ENST00000560663 TNS2Q63HR2 1409 aa23.08■■□□□ 1.28
MIR9-3HG-210ENST00000560663 MTHFSP49914 203 aa23.07■■□□□ 1.28
MIR9-3HG-210ENST00000560663 DDX10Q13206 875 aaKnown RBP23.07■■□□□ 1.28
MIR9-3HG-210ENST00000560663 RGPD2P0DJD1 1756 aa23.06■■□□□ 1.28
MIR9-3HG-210ENST00000560663 EXOC5O00471 708 aa23.05■■□□□ 1.28
MIR9-3HG-210ENST00000560663 FAM196AQ6ZSG2 479 aa23.04■■□□□ 1.28
MIR9-3HG-210ENST00000560663 OVOS2A0A0G2JMS6 1433 aa23.03■■□□□ 1.28
MIR9-3HG-210ENST00000560663 IL13P35225 146 aa23.03■■□□□ 1.28
MIR9-3HG-210ENST00000560663 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
MIR9-3HG-210ENST00000560663 BCL9O00512 1426 aa23.01■■□□□ 1.27
MIR9-3HG-210ENST00000560663 CCDC125Q86Z20 511 aa23.01■■□□□ 1.27
MIR9-3HG-210ENST00000560663 COL3A1P02461 1466 aaPredicted RBP22.99■■□□□ 1.27
MIR9-3HG-210ENST00000560663 TRIM37O94972 964 aa22.99■■□□□ 1.27
MIR9-3HG-210ENST00000560663 PPP2R1AP30153 589 aa22.99■■□□□ 1.27
MIR9-3HG-210ENST00000560663 PTF1AQ7RTS3 328 aa22.99■■□□□ 1.27
MIR9-3HG-210ENST00000560663 PARD3Q8TEW0 1356 aa22.99■■□□□ 1.27
MIR9-3HG-210ENST00000560663 DEFB132Q7Z7B7 95 aa22.98■■□□□ 1.27
MIR9-3HG-210ENST00000560663 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
MIR9-3HG-210ENST00000560663 ZCRB1Q8TBF4 217 aaKnown RBP22.97■■□□□ 1.27
MIR9-3HG-210ENST00000560663 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
MIR9-3HG-210ENST00000560663 TATP17735 454 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms