RNA–Protein interactions for RNA: ENST00000560504.1

PIF1-209, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,114 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-209ENST00000560504 RGS12O14924 1447 aa29.98■■■□□ 2.39
PIF1-209ENST00000560504 NRAPQ86VF7 1730 aa29.97■■■□□ 2.39
PIF1-209ENST00000560504 KNSTRNQ9Y448 316 aa29.97■■■□□ 2.39
PIF1-209ENST00000560504 LMO7Q8WWI1 1683 aa29.96■■■□□ 2.39
PIF1-209ENST00000560504 SPATA31A1Q5TZJ5 1347 aa29.96■■■□□ 2.39
PIF1-209ENST00000560504 COL5A2P05997 1499 aaPredicted RBP29.95■■■□□ 2.39
PIF1-209ENST00000560504 GLI3P10071 1580 aa29.94■■■□□ 2.38
PIF1-209ENST00000560504 ONECUT3O60422 494 aaPredicted RBP29.94■■■□□ 2.38
PIF1-209ENST00000560504 FAM98CQ17RN3 349 aaKnown RBP29.94■■■□□ 2.38
PIF1-209ENST00000560504 USP35Q9P2H5 1018 aa29.94■■■□□ 2.38
PIF1-209ENST00000560504 MAP3K19Q56UN5 1328 aa29.94■■■□□ 2.38
PIF1-209ENST00000560504 CSB-PGBD3P0DP91 1061 aa29.92■■■□□ 2.38
PIF1-209ENST00000560504 AMPHP49418 695 aa29.92■■■□□ 2.38
PIF1-209ENST00000560504 RRS1Q15050 365 aaKnown RBP29.92■■■□□ 2.38
PIF1-209ENST00000560504 TOM1L2Q6ZVM7 507 aa29.91■■■□□ 2.38
PIF1-209ENST00000560504 SEPT12Q8IYM1 358 aa29.91■■■□□ 2.38
PIF1-209ENST00000560504 IP6K1Q92551 441 aa29.91■■■□□ 2.38
PIF1-209ENST00000560504 A0A0G2JS52 829 aa29.9■■■□□ 2.38
PIF1-209ENST00000560504 MYT1Q01538 1121 aa29.9■■■□□ 2.38
PIF1-209ENST00000560504 WDR17Q8IZU2 1322 aa29.9■■■□□ 2.38
PIF1-209ENST00000560504 COL18A1P39060 1754 aa29.9■■■□□ 2.38
PIF1-209ENST00000560504 TCP11L2Q8N4U5 519 aa29.88■■■□□ 2.37
PIF1-209ENST00000560504 CRB1P82279 1406 aa29.88■■■□□ 2.37
PIF1-209ENST00000560504 ABCC6O95255 1503 aa29.87■■■□□ 2.37
PIF1-209ENST00000560504 PER1O15534 1290 aaPredicted RBP29.87■■■□□ 2.37
PIF1-209ENST00000560504 KIF20BQ96Q89 1820 aa29.87■■■□□ 2.37
PIF1-209ENST00000560504 HOXC9P31274 260 aa29.86■■■□□ 2.37
PIF1-209ENST00000560504 ANKRD24Q8TF21 1146 aa29.86■■■□□ 2.37
PIF1-209ENST00000560504 NSD2O96028 1365 aa29.86■■■□□ 2.37
PIF1-209ENST00000560504 AMER1Q5JTC6 1135 aaPredicted RBP29.85■■■□□ 2.37
PIF1-209ENST00000560504 BARGINQ6ZT62 677 aa29.85■■■□□ 2.37
PIF1-209ENST00000560504 THRAP3Q9Y2W1 955 aaKnown RBP29.85■■■□□ 2.37
PIF1-209ENST00000560504 TNNT2P45379 298 aaPredicted RBP29.84■■■□□ 2.37
PIF1-209ENST00000560504 MORC1Q86VD1 984 aa29.84■■■□□ 2.37
PIF1-209ENST00000560504 ERBB3P21860 1342 aa29.84■■■□□ 2.37
PIF1-209ENST00000560504 BLMP54132 1417 aaPredicted RBP29.83■■■□□ 2.37
PIF1-209ENST00000560504 LTV1Q96GA3 475 aaPredicted RBP29.83■■■□□ 2.37
PIF1-209ENST00000560504 CARD10Q9BWT7 1032 aa29.82■■■□□ 2.36
PIF1-209ENST00000560504 NLRP2Q9NX02 1062 aa29.81■■■□□ 2.36
PIF1-209ENST00000560504 EMILIN1Q9Y6C2 1016 aa29.81■■■□□ 2.36
PIF1-209ENST00000560504 RTL1A6NKG5 1358 aa29.8■■■□□ 2.36
PIF1-209ENST00000560504 PPM1GO15355 546 aaPredicted RBP29.79■■■□□ 2.36
PIF1-209ENST00000560504 LTN1O94822 1766 aa29.78■■■□□ 2.36
PIF1-209ENST00000560504 KRT27Q7Z3Y8 459 aa29.78■■■□□ 2.36
PIF1-209ENST00000560504 POLKQ9UBT6 870 aa29.78■■■□□ 2.36
PIF1-209ENST00000560504 KIF24Q5T7B8 1368 aa29.77■■■□□ 2.36
PIF1-209ENST00000560504 HSP90AB2PQ58FF8 381 aa29.77■■■□□ 2.36
PIF1-209ENST00000560504 CC2D1BQ5T0F9 858 aaKnown RBP29.76■■■□□ 2.35
PIF1-209ENST00000560504 FLT4P35916 1363 aa29.76■■■□□ 2.35
PIF1-209ENST00000560504 RGPD5Q99666 1765 aa29.73■■■□□ 2.35
PIF1-209ENST00000560504 CNGB1Q14028 1251 aaPredicted RBP29.73■■■□□ 2.35
PIF1-209ENST00000560504 INSRP06213 1382 aa29.73■■■□□ 2.35
PIF1-209ENST00000560504 UPF1Q92900 1129 aaKnown RBP eCLIP29.71■■■□□ 2.35
PIF1-209ENST00000560504 CDCA7Q9BWT1 371 aaPredicted RBP29.71■■■□□ 2.35
PIF1-209ENST00000560504 NPC1L1Q9UHC9 1359 aa29.7■■■□□ 2.35
PIF1-209ENST00000560504 THSD7AQ9UPZ6 1657 aa29.69■■■□□ 2.34
PIF1-209ENST00000560504 PDE3BQ13370 1112 aa29.69■■■□□ 2.34
PIF1-209ENST00000560504 SMG6Q86US8 1419 aaKnown RBP29.69■■■□□ 2.34
PIF1-209ENST00000560504 ANKRD26Q9UPS8 1709 aa29.68■■■□□ 2.34
PIF1-209ENST00000560504 DDB1Q16531 1140 aa29.66■■■□□ 2.34
PIF1-209ENST00000560504 NBPF6Q5VWK0 638 aa29.66■■■□□ 2.34
PIF1-209ENST00000560504 NBPF4Q96M43 638 aa29.66■■■□□ 2.34
PIF1-209ENST00000560504 PEAK1Q9H792 1746 aa29.65■■■□□ 2.34
PIF1-209ENST00000560504 IL2RBP14784 551 aa29.65■■■□□ 2.34
PIF1-209ENST00000560504 FAM182BQ5T319 152 aa29.65■■■□□ 2.34
PIF1-209ENST00000560504 DISP2A7MBM2 1401 aa29.63■■■□□ 2.33
PIF1-209ENST00000560504 DDX10Q13206 875 aaKnown RBP29.63■■■□□ 2.33
PIF1-209ENST00000560504 EXOC5O00471 708 aa29.62■■■□□ 2.33
PIF1-209ENST00000560504 BRWD3Q6RI45 1802 aa29.61■■■□□ 2.33
PIF1-209ENST00000560504 USHBP1Q8N6Y0 703 aa29.61■■■□□ 2.33
PIF1-209ENST00000560504 MTHFSP49914 203 aa29.59■■■□□ 2.33
PIF1-209ENST00000560504 EIF4A2Q14240 407 aaKnown RBP29.59■■■□□ 2.33
PIF1-209ENST00000560504 FAM196AQ6ZSG2 479 aa29.57■■■□□ 2.32
PIF1-209ENST00000560504 MAP2P11137 1827 aaKnown RBP29.57■■■□□ 2.32
PIF1-209ENST00000560504 CCDC125Q86Z20 511 aa29.56■■■□□ 2.32
PIF1-209ENST00000560504 EYA1Q99502 592 aa29.56■■■□□ 2.32
PIF1-209ENST00000560504 PARP4Q9UKK3 1724 aaKnown RBP29.54■■■□□ 2.32
PIF1-209ENST00000560504 FAM208AQ9UK61 1670 aaKnown RBP29.54■■■□□ 2.32
PIF1-209ENST00000560504 MARCH10Q8NA82 808 aaPredicted RBP29.54■■■□□ 2.32
PIF1-209ENST00000560504 RAPGEF4Q8WZA2 1011 aa29.54■■■□□ 2.32
PIF1-209ENST00000560504 LRRC37A3O60309 1634 aa29.5■■■□□ 2.31
PIF1-209ENST00000560504 ZNF316A6NFI3 1004 aaPredicted RBP29.5■■■□□ 2.31
PIF1-209ENST00000560504 TATP17735 454 aaPredicted RBP29.5■■■□□ 2.31
PIF1-209ENST00000560504 SF3B2Q13435 895 aaKnown RBP29.5■■■□□ 2.31
PIF1-209ENST00000560504 TNS2Q63HR2 1409 aa29.5■■■□□ 2.31
PIF1-209ENST00000560504 ZCRB1Q8TBF4 217 aaKnown RBP29.48■■■□□ 2.31
PIF1-209ENST00000560504 OVOS2A0A0G2JMS6 1433 aa29.47■■■□□ 2.31
PIF1-209ENST00000560504 MEGF6O75095 1541 aa29.47■■■□□ 2.31
PIF1-209ENST00000560504 TRIM37O94972 964 aa29.47■■■□□ 2.31
PIF1-209ENST00000560504 IL13P35225 146 aa29.47■■■□□ 2.31
PIF1-209ENST00000560504 DDX54Q8TDD1 881 aaKnown RBP29.47■■■□□ 2.31
PIF1-209ENST00000560504 WNK3Q9BYP7 1800 aa29.47■■■□□ 2.31
PIF1-209ENST00000560504 RGPD2P0DJD1 1756 aa29.45■■■□□ 2.31
PIF1-209ENST00000560504 PPP2R1AP30153 589 aa29.45■■■□□ 2.31
PIF1-209ENST00000560504 NCAPD2Q15021 1401 aa29.45■■■□□ 2.3
PIF1-209ENST00000560504 IGSF1Q8N6C5 1336 aa29.45■■■□□ 2.3
PIF1-209ENST00000560504 DIAPH1O60610 1272 aaKnown RBP29.43■■■□□ 2.3
PIF1-209ENST00000560504 EP400Q96L91 3159 aa29.42■■■□□ 2.3
PIF1-209ENST00000560504 CFAP53Q96M91 514 aa29.4■■■□□ 2.3
PIF1-209ENST00000560504 PARD3Q8TEW0 1356 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms