RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	SLIT3	O75094	1523 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	NFAT5	O94916	1531 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	GLI3	P10071	1580 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	USHBP1	Q8N6Y0	703 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	RGS12	O14924	1447 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	CSB-PGBD3	P0DP91	1061 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	RBM6	P78332	1123 aa	Known RBP	13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	HSP90AB2P	Q58FF8	381 aa		13.9	□□□□□ -0.18
FAM227B-208	ENST00000559573	SLC24A1	O60721	1099 aa		13.89	□□□□□ -0.19
FAM227B-208	ENST00000559573	NINL	Q9Y2I6	1382 aa		13.89	□□□□□ -0.19
FAM227B-208	ENST00000559573	ATRN	O75882	1429 aa		13.89	□□□□□ -0.19
FAM227B-208	ENST00000559573	TOM1L2	Q6ZVM7	507 aa		13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	NRAP	Q86VF7	1730 aa		13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	COL14A1	Q05707	1796 aa	Known RBP	13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	KIF20B	Q96Q89	1820 aa		13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	PER1	O15534	1290 aa	Predicted RBP	13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	KNSTRN	Q9Y448	316 aa		13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	COL18A1	P39060	1754 aa		13.88	□□□□□ -0.19
FAM227B-208	ENST00000559573	USP31	Q70CQ4	1352 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	AMPH	P49418	695 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	VPS72	Q15906	364 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	SEPT12	Q8IYM1	358 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	KCNH5	Q8NCM2	988 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	COL5A2	P05997	1499 aa	Predicted RBP	13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	CGNL1	Q0VF96	1302 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	LMO7	Q8WWI1	1683 aa		13.87	□□□□□ -0.19
FAM227B-208	ENST00000559573	RGPD2	P0DJD1	1756 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	NLRP2	Q9NX02	1062 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	CPD	O75976	1380 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	SPATA31A5	Q5VU36	1347 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	SPATA31A7	Q8IWB4	1347 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	GOLGB1	Q14789	3259 aa	Known RBP	13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	ANKRD24	Q8TF21	1146 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	BRWD3	Q6RI45	1802 aa		13.86	□□□□□ -0.19
FAM227B-208	ENST00000559573	SPATA31A1	Q5TZJ5	1347 aa		13.85	□□□□□ -0.19
FAM227B-208	ENST00000559573	HOXC9	P31274	260 aa		13.85	□□□□□ -0.19
FAM227B-208	ENST00000559573	PEAK1	Q9H792	1746 aa		13.85	□□□□□ -0.19
FAM227B-208	ENST00000559573	MAP2	P11137	1827 aa	Known RBP	13.85	□□□□□ -0.19
FAM227B-208	ENST00000559573	MORC1	Q86VD1	984 aa		13.84	□□□□□ -0.19
FAM227B-208	ENST00000559573	BRD4	O60885	1362 aa	Predicted RBP	13.84	□□□□□ -0.19
FAM227B-208	ENST00000559573	AATK	Q6ZMQ8	1374 aa		13.84	□□□□□ -0.19
FAM227B-208	ENST00000559573	POLK	Q9UBT6	870 aa		13.83	□□□□□ -0.2
FAM227B-208	ENST00000559573	NWD2	Q9ULI1	1742 aa		13.83	□□□□□ -0.2
FAM227B-208	ENST00000559573	ERBB3	P21860	1342 aa		13.82	□□□□□ -0.2
FAM227B-208	ENST00000559573	KAT6B	Q8WYB5	2073 aa		13.82	□□□□□ -0.2
FAM227B-208	ENST00000559573	NBPF6	Q5VWK0	638 aa		13.82	□□□□□ -0.2
FAM227B-208	ENST00000559573	IP6K1	Q92551	441 aa		13.82	□□□□□ -0.2
FAM227B-208	ENST00000559573	NBPF4	Q96M43	638 aa		13.82	□□□□□ -0.2
FAM227B-208	ENST00000559573	UTRN	P46939	3433 aa		13.81	□□□□□ -0.2
FAM227B-208	ENST00000559573	PTF1A	Q7RTS3	328 aa		13.81	□□□□□ -0.2
FAM227B-208	ENST00000559573	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.81	□□□□□ -0.2
FAM227B-208	ENST00000559573	WDR17	Q8IZU2	1322 aa		13.81	□□□□□ -0.2
FAM227B-208	ENST00000559573	DIEXF	Q68CQ4	756 aa	Known RBP	13.8	□□□□□ -0.2
FAM227B-208	ENST00000559573	TCP11L2	Q8N4U5	519 aa		13.8	□□□□□ -0.2
FAM227B-208	ENST00000559573	SOCS7	O14512	581 aa		13.79	□□□□□ -0.2
FAM227B-208	ENST00000559573	USP54	Q70EL1	1684 aa		13.78	□□□□□ -0.2
FAM227B-208	ENST00000559573	CRB1	P82279	1406 aa		13.78	□□□□□ -0.2
FAM227B-208	ENST00000559573	MTHFS	P49914	203 aa		13.78	□□□□□ -0.2
FAM227B-208	ENST00000559573	KRT27	Q7Z3Y8	459 aa		13.77	□□□□□ -0.21
FAM227B-208	ENST00000559573	EIF4A2	Q14240	407 aa	Known RBP	13.76	□□□□□ -0.21
FAM227B-208	ENST00000559573	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
FAM227B-208	ENST00000559573	ONECUT3	O60422	494 aa	Predicted RBP	13.75	□□□□□ -0.21
FAM227B-208	ENST00000559573	DEFB132	Q7Z7B7	95 aa		13.75	□□□□□ -0.21
FAM227B-208	ENST00000559573	AEBP1	Q8IUX7	1158 aa		13.75	□□□□□ -0.21
FAM227B-208	ENST00000559573	DDX54	Q8TDD1	881 aa	Known RBP	13.75	□□□□□ -0.21
FAM227B-208	ENST00000559573	SENP3-EIF4A1	A0A087X0R7	540 aa		13.75	□□□□□ -0.21
FAM227B-208	ENST00000559573	ACSBG1	Q96GR2	724 aa		13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	EYA1	Q99502	592 aa		13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	CARD10	Q9BWT7	1032 aa		13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	ANKRD26	Q9UPS8	1709 aa		13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	TRIM37	O94972	964 aa		13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	FLT4	P35916	1363 aa		13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	MARCH10	Q8NA82	808 aa	Predicted RBP	13.74	□□□□□ -0.21
FAM227B-208	ENST00000559573	HMOX1	P09601	288 aa		13.73	□□□□□ -0.21
FAM227B-208	ENST00000559573	PDE3B	Q13370	1112 aa		13.73	□□□□□ -0.21
FAM227B-208	ENST00000559573	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.73	□□□□□ -0.21
FAM227B-208	ENST00000559573	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.72	□□□□□ -0.21
FAM227B-208	ENST00000559573	DDB1	Q16531	1140 aa		13.72	□□□□□ -0.21
FAM227B-208	ENST00000559573	MEGF6	O75095	1541 aa		13.72	□□□□□ -0.21
FAM227B-208	ENST00000559573	KCNQ2	O43526	872 aa		13.72	□□□□□ -0.21
FAM227B-208	ENST00000559573	BARGIN	Q6ZT62	677 aa		13.71	□□□□□ -0.21
FAM227B-208	ENST00000559573	THSD7A	Q9UPZ6	1657 aa		13.71	□□□□□ -0.21
FAM227B-208	ENST00000559573	INSR	P06213	1382 aa		13.71	□□□□□ -0.21
FAM227B-208	ENST00000559573	BLM	P54132	1417 aa	Predicted RBP	13.7	□□□□□ -0.22
FAM227B-208	ENST00000559573	IL2RB	P14784	551 aa		13.7	□□□□□ -0.22
FAM227B-208	ENST00000559573	LRRC37A3	O60309	1634 aa		13.69	□□□□□ -0.22
FAM227B-208	ENST00000559573	PPP2R1A	P30153	589 aa		13.69	□□□□□ -0.22
FAM227B-208	ENST00000559573	EXOC5	O00471	708 aa		13.68	□□□□□ -0.22
FAM227B-208	ENST00000559573	U2SURP	O15042	1029 aa	Known RBP	13.68	□□□□□ -0.22
FAM227B-208	ENST00000559573	FAM208A	Q9UK61	1670 aa	Known RBP	13.68	□□□□□ -0.22
FAM227B-208	ENST00000559573	KCNQ4	P56696	695 aa		13.68	□□□□□ -0.22
FAM227B-208	ENST00000559573	SULT6B1	Q6IMI4	303 aa		13.68	□□□□□ -0.22
FAM227B-208	ENST00000559573	DISP2	A7MBM2	1401 aa		13.67	□□□□□ -0.22
FAM227B-208	ENST00000559573	EN1	Q05925	392 aa	Predicted RBP	13.67	□□□□□ -0.22
FAM227B-208	ENST00000559573	SYTL4	Q96C24	671 aa	Predicted RBP	13.67	□□□□□ -0.22
FAM227B-208	ENST00000559573	NSD2	O96028	1365 aa		13.67	□□□□□ -0.22
FAM227B-208	ENST00000559573	IL13	P35225	146 aa		13.67	□□□□□ -0.22
FAM227B-208	ENST00000559573	CCDC184	Q52MB2	194 aa		13.67	□□□□□ -0.22
FAM227B-208	ENST00000559573	THRAP3	Q9Y2W1	955 aa	Known RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms