RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 GPSM3Q9Y4H4 160 aa4.02□□□□□ -1.77
LINC02253-201ENST00000559321 PLEKHD1A6NEE1 506 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 C6orf229H3BNL8 230 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 ARHGAP4P98171 946 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 DPYDQ12882 1025 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 GNL2Q13823 731 aaKnown RBP4.01□□□□□ -1.77
LINC02253-201ENST00000559321 EML3Q32P44 896 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 SLFNL1Q499Z3 407 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 CCDC181Q5TID7 509 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 NUDT18Q6ZVK8 323 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 NOL8Q76FK4 1167 aaKnown RBP4.01□□□□□ -1.77
LINC02253-201ENST00000559321 METTL16Q86W50 562 aaKnown RBP4.01□□□□□ -1.77
LINC02253-201ENST00000559321 OGFOD1Q8N543 542 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 ZNF454Q8N9F8 522 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 PLPP7Q8NBV4 271 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 RBCK1Q9BYM8 510 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 FKBPLQ9UIM3 349 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 TSKSQ9UJT2 592 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 BRPF3Q9ULD4 1205 aa4.01□□□□□ -1.77
LINC02253-201ENST00000559321 PTCD1O75127 700 aaKnown RBP4□□□□□ -1.77
LINC02253-201ENST00000559321 ABL1P00519 1130 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 ATP2B1P20020 1258 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 TAGLNQ01995 201 aaKnown RBP4□□□□□ -1.77
LINC02253-201ENST00000559321 FKBP4Q02790 459 aaKnown RBP eCLIP4□□□□□ -1.77
LINC02253-201ENST00000559321 FMR1Q06787 632 aaKnown RBP eCLIP4□□□□□ -1.77
LINC02253-201ENST00000559321 ECM1Q16610 540 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 LDLRAD1Q5T700 205 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 EGFLAMQ63HQ2 1017 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 SDE2Q6IQ49 451 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 PACS2Q86VP3 889 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 RETREG3Q86VR2 466 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 CERS3Q8IU89 383 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 MICAL1Q8TDZ2 1067 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 TATDN2Q93075 761 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 COL26A1Q96A83 441 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 PRKAG2Q9UGJ0 569 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 TBX22Q9Y458 520 aa4□□□□□ -1.77
LINC02253-201ENST00000559321 TRIM6-TRIM34B2RNG4 842 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 SNPHO15079 494 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 MARCH6O60337 910 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 DKK1O94907 266 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 NPR3P17342 541 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 CLDN10P78369 228 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 GUCA2AQ02747 115 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 ZNF211Q13398 564 aaPredicted RBP3.99□□□□□ -1.77
LINC02253-201ENST00000559321 C3orf67Q6ZVT6 689 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 NT5DC4Q86YG4 428 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 DEPDC4Q8N2C3 294 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 PHTF2Q8N3S3 785 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 CITED4Q96RK1 184 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 TMX1Q9H3N1 280 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 CCSER2Q9H7U1 834 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 BCL2L12Q9HB09 334 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 DNAAF2Q9NVR5 837 aaKnown RBP3.99□□□□□ -1.77
LINC02253-201ENST00000559321 CEP126Q9P2H0 1117 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 PNMA3Q9UL41 463 aa3.99□□□□□ -1.77
LINC02253-201ENST00000559321 PSDA5PKW4 1024 aaPredicted RBP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 PER1O15534 1290 aaPredicted RBP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 TREHO43280 583 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 PRPF40AO75400 957 aaKnown RBP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 P4HBP07237 508 aaKnown RBP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 SLC4A3P48751 1232 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 SEC13P55735 322 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 FANCCQ00597 558 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 RBL2Q08999 1139 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 TRAF7Q6Q0C0 670 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 LYPD8Q6UX82 237 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 ZNF662Q6ZS27 426 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 TMC4Q7Z404 712 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 GPKOWQ92917 476 aaPredicted RBP eCLIP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 KCNB2Q92953 911 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 RNF34Q969K3 372 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 DNAJC2Q99543 621 aaKnown RBP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 KRTAP3-3Q9BYR6 98 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 KRTAP3-2Q9BYR7 98 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 PRKD2Q9BZL6 878 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 MRS2Q9HD23 443 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 NOD1Q9Y239 953 aa3.98□□□□□ -1.77
LINC02253-201ENST00000559321 RBM19Q9Y4C8 960 aaKnown RBP3.98□□□□□ -1.77
LINC02253-201ENST00000559321 POTEB3A0JP26 581 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 M0R2N6 131 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 RAB11FIP3O75154 756 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 FAM13AO94988 1023 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
LINC02253-201ENST00000559321 SLC10A3P09131 477 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 CCDC144BQ3MJ40 725 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 POTEBQ6S5H4 581 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 ZCRB1Q8TBF4 217 aaKnown RBP3.97□□□□□ -1.77
LINC02253-201ENST00000559321 HELQQ8TDG4 1101 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 GTF3C2Q8WUA4 911 aaPredicted RBP3.97□□□□□ -1.77
LINC02253-201ENST00000559321 HLA-CQ95604 372 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 ZNF594Q96JF6 807 aaPredicted RBP3.97□□□□□ -1.77
LINC02253-201ENST00000559321 DMRTB1Q96MA1 342 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 PSMD1Q99460 953 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 SBNO2Q9Y2G9 1366 aa3.97□□□□□ -1.77
LINC02253-201ENST00000559321 NDUFB5O43674 189 aa3.96□□□□□ -1.78
LINC02253-201ENST00000559321 SORBS3O60504 671 aa3.96□□□□□ -1.78
LINC02253-201ENST00000559321 PRMT3O60678 531 aa3.96□□□□□ -1.78
LINC02253-201ENST00000559321 F12P00748 615 aaPredicted RBP3.96□□□□□ -1.78
LINC02253-201ENST00000559321 COL9A1P20849 921 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms